RNA–Protein interactions for RNA: ENST00000345317.6

SKAP2-201, Transcript of src kinase associated phosphoprotein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKAP2, Length 3,998 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP2-201ENST00000345317 ARHGAP25P42331 645 aa9.27□□□□□ -0.93
SKAP2-201ENST00000345317 NOP14P78316 857 aaKnown RBP9.27□□□□□ -0.93
SKAP2-201ENST00000345317 BRD3Q15059 726 aa9.27□□□□□ -0.93
SKAP2-201ENST00000345317 DNAJC24Q6P3W2 148 aa9.27□□□□□ -0.93
SKAP2-201ENST00000345317 NIPA1Q7RTP0 329 aa9.27□□□□□ -0.93
SKAP2-201ENST00000345317 ZNF354CQ86Y25 554 aa9.27□□□□□ -0.93
SKAP2-201ENST00000345317 MSANTD4Q8NCY6 345 aa9.27□□□□□ -0.93
SKAP2-201ENST00000345317 MAK16Q9BXY0 300 aaKnown RBP9.27□□□□□ -0.93
SKAP2-201ENST00000345317 ZWILCHQ9H900 591 aa9.27□□□□□ -0.93
SKAP2-201ENST00000345317 PCSK1NQ9UHG2 260 aa9.27□□□□□ -0.93
SKAP2-201ENST00000345317 SPATA31C2B4DYI2 1134 aa9.26□□□□□ -0.93
SKAP2-201ENST00000345317 PI4K2BG5E9Z4 385 aa9.26□□□□□ -0.93
SKAP2-201ENST00000345317 DHX15O43143 795 aaKnown RBP9.26□□□□□ -0.93
SKAP2-201ENST00000345317 HBP1O60381 514 aa9.26□□□□□ -0.93
SKAP2-201ENST00000345317 P4HA1P13674 534 aa9.26□□□□□ -0.93
SKAP2-201ENST00000345317 GLRA2P23416 452 aa9.26□□□□□ -0.93
SKAP2-201ENST00000345317 ATP1A2P50993 1020 aa9.26□□□□□ -0.93
SKAP2-201ENST00000345317 MXD4Q14582 209 aaPredicted RBP9.26□□□□□ -0.93
SKAP2-201ENST00000345317 NAB2Q15742 525 aa9.26□□□□□ -0.93
SKAP2-201ENST00000345317 IER5Q5VY09 327 aa9.26□□□□□ -0.93
SKAP2-201ENST00000345317 OR6B2Q6IFH4 312 aa9.26□□□□□ -0.93
SKAP2-201ENST00000345317 PHLDB3Q6NSJ2 640 aa9.26□□□□□ -0.93
SKAP2-201ENST00000345317 RPS6KC1Q96S38 1066 aa9.26□□□□□ -0.93
SKAP2-201ENST00000345317 NAP1L3Q99457 506 aaPredicted RBP9.26□□□□□ -0.93
SKAP2-201ENST00000345317 OSMRQ99650 979 aa9.26□□□□□ -0.93
SKAP2-201ENST00000345317 PAIP2Q9BPZ3 127 aaKnown RBP9.26□□□□□ -0.93
SKAP2-201ENST00000345317 R3HDMLQ9H3Y0 253 aa9.26□□□□□ -0.93
SKAP2-201ENST00000345317 KIAA1586Q9HCI6 787 aa9.26□□□□□ -0.93
SKAP2-201ENST00000345317 TMEM8AQ9HCN3 771 aa9.26□□□□□ -0.93
SKAP2-201ENST00000345317 RBPJLQ9UBG7 517 aa9.26□□□□□ -0.93
SKAP2-201ENST00000345317 HESX1Q9UBX0 185 aa9.26□□□□□ -0.93
SKAP2-201ENST00000345317 AMACRQ9UHK6 382 aa9.26□□□□□ -0.93
SKAP2-201ENST00000345317 B4GALT5O43286 388 aa9.26□□□□□ -0.93
SKAP2-201ENST00000345317 GRAP2O75791 330 aa9.26□□□□□ -0.93
SKAP2-201ENST00000345317 STAM2O75886 525 aa9.26□□□□□ -0.93
SKAP2-201ENST00000345317 CXCL8P10145 99 aa9.26□□□□□ -0.93
SKAP2-201ENST00000345317 HOXA7P31268 230 aaPredicted RBP9.26□□□□□ -0.93
SKAP2-201ENST00000345317 EFNA5P52803 228 aa9.26□□□□□ -0.93
SKAP2-201ENST00000345317 PAK2Q13177 524 aa9.26□□□□□ -0.93
SKAP2-201ENST00000345317 SEPT7Q16181 437 aaKnown RBP9.26□□□□□ -0.93
SKAP2-201ENST00000345317 KCNV1Q6PIU1 500 aa9.26□□□□□ -0.93
SKAP2-201ENST00000345317 HOOK3Q86VS8 718 aa9.26□□□□□ -0.93
SKAP2-201ENST00000345317 ERICH1Q86X53 443 aa9.26□□□□□ -0.93
SKAP2-201ENST00000345317 RDM1Q8NG50 284 aa9.26□□□□□ -0.93
SKAP2-201ENST00000345317 BAP1Q92560 729 aa9.26□□□□□ -0.93
SKAP2-201ENST00000345317 ACSF2Q96CM8 615 aaPredicted RBP9.26□□□□□ -0.93
SKAP2-201ENST00000345317 MBOAT7Q96N66 472 aa9.26□□□□□ -0.93
SKAP2-201ENST00000345317 CALN1Q9BXU9 219 aa9.26□□□□□ -0.93
SKAP2-201ENST00000345317 RBM12Q9NTZ6 932 aaKnown RBP9.26□□□□□ -0.93
SKAP2-201ENST00000345317 TAS2R14Q9NYV8 317 aa9.26□□□□□ -0.93
SKAP2-201ENST00000345317 SNX9Q9Y5X1 595 aa9.26□□□□□ -0.93
SKAP2-201ENST00000345317 UBR3Q6ZT12 1888 aa9.26□□□□□ -0.93
SKAP2-201ENST00000345317 LRRD1A4D1F6 860 aa9.26□□□□□ -0.93
SKAP2-201ENST00000345317 EXTL3O43909 919 aa9.26□□□□□ -0.93
SKAP2-201ENST00000345317 BUB1BO60566 1050 aaPredicted RBP9.26□□□□□ -0.93
SKAP2-201ENST00000345317 PDGFRBP09619 1106 aa9.26□□□□□ -0.93
SKAP2-201ENST00000345317 SCP2P22307 547 aa9.26□□□□□ -0.93
SKAP2-201ENST00000345317 TNFSF9P41273 254 aa9.26□□□□□ -0.93
SKAP2-201ENST00000345317 LAMC2Q13753 1193 aa9.26□□□□□ -0.93
SKAP2-201ENST00000345317 ZBTB41Q5SVQ8 909 aa9.26□□□□□ -0.93
SKAP2-201ENST00000345317 TMEM63BQ5T3F8 832 aa9.26□□□□□ -0.93
SKAP2-201ENST00000345317 APBB1IPQ7Z5R6 666 aaPredicted RBP9.26□□□□□ -0.93
SKAP2-201ENST00000345317 PARD3BQ8TEW8 1205 aa9.26□□□□□ -0.93
SKAP2-201ENST00000345317 SELENOSQ9BQE4 189 aa9.26□□□□□ -0.93
SKAP2-201ENST00000345317 ZNF148Q9UQR1 794 aa9.26□□□□□ -0.93
SKAP2-201ENST00000345317 ZNF263O14978 683 aa9.25□□□□□ -0.93
SKAP2-201ENST00000345317 SLC26A4O43511 780 aa9.25□□□□□ -0.93
SKAP2-201ENST00000345317 RAP1GAPP47736 663 aa9.25□□□□□ -0.93
SKAP2-201ENST00000345317 RGS7P49802 495 aa9.25□□□□□ -0.93
SKAP2-201ENST00000345317 CYP24A1Q07973 514 aa9.25□□□□□ -0.93
SKAP2-201ENST00000345317 ADCY1Q08828 1119 aa9.25□□□□□ -0.93
SKAP2-201ENST00000345317 ZCWPW2Q504Y3 356 aa9.25□□□□□ -0.93
SKAP2-201ENST00000345317 FIGNQ5HY92 759 aa9.25□□□□□ -0.93
SKAP2-201ENST00000345317 CC2D1AQ6P1N0 951 aaPredicted RBP9.25□□□□□ -0.93
SKAP2-201ENST00000345317 DDX42Q86XP3 938 aaKnown RBP eCLIP9.25□□□□□ -0.93
SKAP2-201ENST00000345317 RBBP8NLQ8NC74 664 aaPredicted RBP9.25□□□□□ -0.93
SKAP2-201ENST00000345317 RNF34Q969K3 372 aa9.25□□□□□ -0.93
SKAP2-201ENST00000345317 RPGRIP1Q96KN7 1286 aa9.25□□□□□ -0.93
SKAP2-201ENST00000345317 TIPINQ9BVW5 301 aa9.25□□□□□ -0.93
SKAP2-201ENST00000345317 MIS12Q9H081 205 aa9.25□□□□□ -0.93
SKAP2-201ENST00000345317 C2orf40Q9H1Z8 148 aa9.25□□□□□ -0.93
SKAP2-201ENST00000345317 ZNF446Q9NWS9 450 aa9.25□□□□□ -0.93
SKAP2-201ENST00000345317 SNX24Q9Y343 169 aa9.25□□□□□ -0.93
SKAP2-201ENST00000345317 TTLL3Q9Y4R7 772 aa9.25□□□□□ -0.93
SKAP2-201ENST00000345317 A0A1B0GUL6 1792 aa9.25□□□□□ -0.93
SKAP2-201ENST00000345317 LRRIQ3A6PVS8 624 aaPredicted RBP9.25□□□□□ -0.93
SKAP2-201ENST00000345317 TLR2O60603 784 aa9.25□□□□□ -0.93
SKAP2-201ENST00000345317 ATP2C2O75185 946 aa9.25□□□□□ -0.93
SKAP2-201ENST00000345317 GJB6O95452 261 aa9.25□□□□□ -0.93
SKAP2-201ENST00000345317 TBC1D8O95759 1140 aa9.25□□□□□ -0.93
SKAP2-201ENST00000345317 ITGB3P05106 788 aa9.25□□□□□ -0.93
SKAP2-201ENST00000345317 RFC5P40937 340 aa9.25□□□□□ -0.93
SKAP2-201ENST00000345317 MYL6P60660 151 aa9.25□□□□□ -0.93
SKAP2-201ENST00000345317 SATB1Q01826 763 aa9.25□□□□□ -0.93
SKAP2-201ENST00000345317 MTM1Q13496 603 aa9.25□□□□□ -0.93
SKAP2-201ENST00000345317 ABHD15Q6UXT9 468 aa9.25□□□□□ -0.93
SKAP2-201ENST00000345317 CEP57Q86XR8 500 aa9.25□□□□□ -0.93
SKAP2-201ENST00000345317 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.25□□□□□ -0.93
SKAP2-201ENST00000345317 ATP8B4Q8TF62 1192 aa9.25□□□□□ -0.93
SKAP2-201ENST00000345317 RFFLQ8WZ73 363 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms