RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 ALDH2P05091 517 aa22.68■■□□□ 1.22
SMARCB1-202ENST00000344921 IGFBP4P22692 258 aa22.68■■□□□ 1.22
SMARCB1-202ENST00000344921 BMT2Q1RMZ1 405 aa22.68■■□□□ 1.22
SMARCB1-202ENST00000344921 P2RX5Q93086 422 aa22.68■■□□□ 1.22
SMARCB1-202ENST00000344921 SNX27Q96L92 541 aa22.68■■□□□ 1.22
SMARCB1-202ENST00000344921 GUCD1Q96NT3 240 aa22.68■■□□□ 1.22
SMARCB1-202ENST00000344921 CBWD1Q9BRT8 395 aa22.68■■□□□ 1.22
SMARCB1-202ENST00000344921 ALG13Q9NP73 1137 aaKnown RBP22.68■■□□□ 1.22
SMARCB1-202ENST00000344921 OR1G1P47890 313 aa22.67■■□□□ 1.22
SMARCB1-202ENST00000344921 PPP2R3AQ06190 1150 aa22.67■■□□□ 1.22
SMARCB1-202ENST00000344921 SLC10A6Q3KNW5 377 aa22.67■■□□□ 1.22
SMARCB1-202ENST00000344921 SAAL1Q96ER3 474 aa22.67■■□□□ 1.22
SMARCB1-202ENST00000344921 FAM213AQ9BRX8 229 aa22.67■■□□□ 1.22
SMARCB1-202ENST00000344921 FAN1Q9Y2M0 1017 aa22.67■■□□□ 1.22
SMARCB1-202ENST00000344921 TRIP11Q15643 1979 aa22.67■■□□□ 1.22
SMARCB1-202ENST00000344921 SMIM28A0A1B0GU29 152 aa22.66■■□□□ 1.22
SMARCB1-202ENST00000344921 CARNS1A5YM72 827 aa22.66■■□□□ 1.22
SMARCB1-202ENST00000344921 CLIC2O15247 247 aa22.66■■□□□ 1.22
SMARCB1-202ENST00000344921 TGFB1I1O43294 461 aa22.66■■□□□ 1.22
SMARCB1-202ENST00000344921 FAM189A1O60320 539 aa22.66■■□□□ 1.22
SMARCB1-202ENST00000344921 FGF18O76093 207 aa22.66■■□□□ 1.22
SMARCB1-202ENST00000344921 GALTP07902 379 aa22.66■■□□□ 1.22
SMARCB1-202ENST00000344921 PPM1AP35813 382 aa22.66■■□□□ 1.22
SMARCB1-202ENST00000344921 ISM2Q6H9L7 571 aa22.66■■□□□ 1.22
SMARCB1-202ENST00000344921 ALKAL1Q6UXT8 129 aa22.66■■□□□ 1.22
SMARCB1-202ENST00000344921 SPG21Q9NZD8 308 aa22.66■■□□□ 1.22
SMARCB1-202ENST00000344921 CPSF3Q9UKF6 684 aaKnown RBP22.66■■□□□ 1.22
SMARCB1-202ENST00000344921 GOLGA8IPA6NC78 632 aa22.65■■□□□ 1.22
SMARCB1-202ENST00000344921 GOLGA8JA6NMD2 632 aa22.65■■□□□ 1.22
SMARCB1-202ENST00000344921 B4GALT3O60512 393 aa22.65■■□□□ 1.22
SMARCB1-202ENST00000344921 CSPG5O95196 566 aa22.65■■□□□ 1.22
SMARCB1-202ENST00000344921 ITGB1P05556 798 aa22.65■■□□□ 1.22
SMARCB1-202ENST00000344921 SLC11A1P49279 550 aa22.65■■□□□ 1.22
SMARCB1-202ENST00000344921 KRT17Q04695 432 aa22.65■■□□□ 1.22
SMARCB1-202ENST00000344921 ENOX2Q16206 610 aaKnown RBP22.65■■□□□ 1.22
SMARCB1-202ENST00000344921 COLGALT2Q8IYK4 626 aa22.65■■□□□ 1.22
SMARCB1-202ENST00000344921 SMYD4Q8IYR2 804 aaPredicted RBP22.65■■□□□ 1.22
SMARCB1-202ENST00000344921 SPATA20Q8TB22 786 aa22.65■■□□□ 1.22
SMARCB1-202ENST00000344921 TMEM169Q96HH4 297 aa22.65■■□□□ 1.22
SMARCB1-202ENST00000344921 TMEM175Q9BSA9 504 aa22.65■■□□□ 1.22
SMARCB1-202ENST00000344921 PLEKHA5Q9HAU0 1116 aa22.65■■□□□ 1.22
SMARCB1-202ENST00000344921 AGPAT3Q9NRZ7 376 aa22.65■■□□□ 1.22
SMARCB1-202ENST00000344921 PRG3Q9Y2Y8 225 aaPredicted RBP22.65■■□□□ 1.22
SMARCB1-202ENST00000344921 CASTOR2A6NHX0 329 aa22.65■■□□□ 1.22
SMARCB1-202ENST00000344921 NRP1O14786 923 aa22.65■■□□□ 1.22
SMARCB1-202ENST00000344921 KIAA0391O15091 583 aaKnown RBP22.65■■□□□ 1.22
SMARCB1-202ENST00000344921 FOSL2P15408 326 aa22.65■■□□□ 1.22
SMARCB1-202ENST00000344921 SNRPFP62306 86 aaKnown RBP22.65■■□□□ 1.22
SMARCB1-202ENST00000344921 DSC1Q08554 894 aa22.65■■□□□ 1.22
SMARCB1-202ENST00000344921 TUSC3Q13454 348 aa22.65■■□□□ 1.22
SMARCB1-202ENST00000344921 ZNF658Q5TYW1 1059 aaPredicted RBP22.65■■□□□ 1.22
SMARCB1-202ENST00000344921 GPD1LQ8N335 351 aa22.65■■□□□ 1.22
SMARCB1-202ENST00000344921 SLC38A7Q9NVC3 462 aa22.65■■□□□ 1.22
SMARCB1-202ENST00000344921 HSPBP1Q9NZL4 362 aa22.65■■□□□ 1.22
SMARCB1-202ENST00000344921 CNTN3Q9P232 1028 aa22.65■■□□□ 1.22
SMARCB1-202ENST00000344921 CGNQ9P2M7 1197 aaKnown RBP22.65■■□□□ 1.22
SMARCB1-202ENST00000344921 LACTBL1A8MY62 500 aa22.64■■□□□ 1.21
SMARCB1-202ENST00000344921 CYP2J2P51589 502 aa22.64■■□□□ 1.21
SMARCB1-202ENST00000344921 SPAG1Q07617 926 aa22.64■■□□□ 1.21
SMARCB1-202ENST00000344921 XKR4Q5GH76 650 aa22.64■■□□□ 1.21
SMARCB1-202ENST00000344921 ZSWIM2Q8NEG5 633 aa22.64■■□□□ 1.21
SMARCB1-202ENST00000344921 GOLGA5Q8TBA6 731 aa22.64■■□□□ 1.21
SMARCB1-202ENST00000344921 PPP1R10Q96QC0 940 aaKnown RBP22.64■■□□□ 1.21
SMARCB1-202ENST00000344921 GTPBP4Q9BZE4 634 aaKnown RBP22.64■■□□□ 1.21
SMARCB1-202ENST00000344921 PUF60Q9UHX1 559 aaKnown RBP22.64■■□□□ 1.21
SMARCB1-202ENST00000344921 COL4A4P53420 1690 aaPredicted RBP22.63■■□□□ 1.21
SMARCB1-202ENST00000344921 TTC26A0AVF1 554 aa22.63■■□□□ 1.21
SMARCB1-202ENST00000344921 GRM6O15303 877 aa22.63■■□□□ 1.21
SMARCB1-202ENST00000344921 EXTL3O43909 919 aa22.63■■□□□ 1.21
SMARCB1-202ENST00000344921 LPXNO60711 386 aa22.63■■□□□ 1.21
SMARCB1-202ENST00000344921 KCNE1P15382 129 aa22.63■■□□□ 1.21
SMARCB1-202ENST00000344921 PTPROQ16827 1216 aa22.63■■□□□ 1.21
SMARCB1-202ENST00000344921 SLC39A11Q8N1S5 342 aa22.63■■□□□ 1.21
SMARCB1-202ENST00000344921 GUF1Q8N442 669 aaKnown RBP22.63■■□□□ 1.21
SMARCB1-202ENST00000344921 RABGGTAQ92696 567 aa22.63■■□□□ 1.21
SMARCB1-202ENST00000344921 KIF12Q96FN5 646 aa22.63■■□□□ 1.21
SMARCB1-202ENST00000344921 ZMAT2Q96NC0 199 aaKnown RBP22.63■■□□□ 1.21
SMARCB1-202ENST00000344921 MAN1B1Q9UKM7 699 aa22.63■■□□□ 1.21
SMARCB1-202ENST00000344921 BIN1O00499 593 aa22.62■■□□□ 1.21
SMARCB1-202ENST00000344921 MEFVO15553 781 aaPredicted RBP22.62■■□□□ 1.21
SMARCB1-202ENST00000344921 ADGRE1Q14246 886 aa22.62■■□□□ 1.21
SMARCB1-202ENST00000344921 CRELD2Q6UXH1 353 aaPredicted RBP22.62■■□□□ 1.21
SMARCB1-202ENST00000344921 CD302Q8IX05 232 aa22.62■■□□□ 1.21
SMARCB1-202ENST00000344921 RDH13Q8NBN7 331 aa22.62■■□□□ 1.21
SMARCB1-202ENST00000344921 SPPL3Q8TCT6 385 aa22.62■■□□□ 1.21
SMARCB1-202ENST00000344921 POF1BQ8WVV4 589 aa22.62■■□□□ 1.21
SMARCB1-202ENST00000344921 IGSF21Q96ID5 467 aa22.62■■□□□ 1.21
SMARCB1-202ENST00000344921 COLEC11Q9BWP8 271 aa22.62■■□□□ 1.21
SMARCB1-202ENST00000344921 NUP62CLQ9H1M0 184 aa22.62■■□□□ 1.21
SMARCB1-202ENST00000344921 CLSTN2Q9H4D0 955 aa22.62■■□□□ 1.21
SMARCB1-202ENST00000344921 CACNG4Q9UBN1 327 aa22.62■■□□□ 1.21
SMARCB1-202ENST00000344921 PDXKO00764 312 aa22.62■■□□□ 1.21
SMARCB1-202ENST00000344921 PLCB3Q01970 1234 aa22.62■■□□□ 1.21
SMARCB1-202ENST00000344921 NAB2Q15742 525 aa22.62■■□□□ 1.21
SMARCB1-202ENST00000344921 TMEM173Q86WV6 379 aaPredicted RBP22.62■■□□□ 1.21
SMARCB1-202ENST00000344921 MICALL1Q8N3F8 863 aa22.62■■□□□ 1.21
SMARCB1-202ENST00000344921 GPT2Q8TD30 523 aa22.62■■□□□ 1.21
SMARCB1-202ENST00000344921 KCTD10Q9H3F6 313 aa22.62■■□□□ 1.21
SMARCB1-202ENST00000344921 GOLGA2P5Q9HBQ8 144 aa22.62■■□□□ 1.21
SMARCB1-202ENST00000344921 KIAA1586Q9HCI6 787 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms