RNA–Protein interactions for RNA: ENST00000344337.10

KPNA1-201, Transcript of karyopherin subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA1, Length 6,830 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-201ENST00000344337 LGSNQ5TDP6 509 aa8.27□□□□□ -1.09
KPNA1-201ENST00000344337 TMEM139Q8IV31 216 aa8.27□□□□□ -1.09
KPNA1-201ENST00000344337 TMEM121Q9BTD3 319 aa8.27□□□□□ -1.09
KPNA1-201ENST00000344337 HSD3B7Q9H2F3 369 aa8.27□□□□□ -1.09
KPNA1-201ENST00000344337 HEY2Q9UBP5 337 aa8.27□□□□□ -1.09
KPNA1-201ENST00000344337 PPRC1Q5VV67 1664 aaKnown RBP8.27□□□□□ -1.09
KPNA1-201ENST00000344337 IPO5O00410 1097 aaKnown RBP8.27□□□□□ -1.09
KPNA1-201ENST00000344337 LAD1O00515 517 aa8.27□□□□□ -1.09
KPNA1-201ENST00000344337 GPC4O75487 556 aa8.27□□□□□ -1.09
KPNA1-201ENST00000344337 NME3Q13232 169 aa8.27□□□□□ -1.09
KPNA1-201ENST00000344337 KCTD21Q4G0X4 260 aa8.27□□□□□ -1.09
KPNA1-201ENST00000344337 ANKRD20A8PQ5CZ79 823 aa8.27□□□□□ -1.09
KPNA1-201ENST00000344337 CDKAL1Q5VV42 579 aa8.27□□□□□ -1.09
KPNA1-201ENST00000344337 NUDCD3Q8IVD9 361 aa8.27□□□□□ -1.09
KPNA1-201ENST00000344337 HNRNPLLQ8WVV9 542 aaKnown RBP8.27□□□□□ -1.09
KPNA1-201ENST00000344337 TEKT4Q8WW24 435 aa8.27□□□□□ -1.09
KPNA1-201ENST00000344337 RFFLQ8WZ73 363 aa8.27□□□□□ -1.09
KPNA1-201ENST00000344337 CBWD1Q9BRT8 395 aa8.27□□□□□ -1.09
KPNA1-201ENST00000344337 TMBIM4Q9HC24 238 aa8.27□□□□□ -1.09
KPNA1-201ENST00000344337 BSDC1Q9NW68 430 aaPredicted RBP8.27□□□□□ -1.09
KPNA1-201ENST00000344337 PPME1Q9Y570 386 aa8.27□□□□□ -1.09
KPNA1-201ENST00000344337 PCDHAC2Q9Y5I4 1007 aa8.27□□□□□ -1.09
KPNA1-201ENST00000344337 MYH2Q9UKX2 1941 aa8.27□□□□□ -1.09
KPNA1-201ENST00000344337 SYNDIG1LA6NDD5 238 aa8.27□□□□□ -1.09
KPNA1-201ENST00000344337 ZBED1O96006 694 aa8.27□□□□□ -1.09
KPNA1-201ENST00000344337 CREB1P16220 341 aa8.27□□□□□ -1.09
KPNA1-201ENST00000344337 GCFC2P16383 781 aaKnown RBP8.27□□□□□ -1.09
KPNA1-201ENST00000344337 EIF3BP55884 814 aaKnown RBP8.27□□□□□ -1.09
KPNA1-201ENST00000344337 GRM4Q14833 912 aa8.27□□□□□ -1.09
KPNA1-201ENST00000344337 FAM47CQ5HY64 1035 aa8.27□□□□□ -1.09
KPNA1-201ENST00000344337 SPOCK2Q92563 424 aa8.27□□□□□ -1.09
KPNA1-201ENST00000344337 MSTO1Q9BUK6 570 aa8.27□□□□□ -1.09
KPNA1-201ENST00000344337 FAM49AQ9H0Q0 323 aaPredicted RBP8.27□□□□□ -1.09
KPNA1-201ENST00000344337 MROH2AA6NES4 1674 aa8.27□□□□□ -1.09
KPNA1-201ENST00000344337 WDR17Q8IZU2 1322 aa8.27□□□□□ -1.09
KPNA1-201ENST00000344337 NELFEP18615 380 aaKnown RBP8.26□□□□□ -1.09
KPNA1-201ENST00000344337 FMO5P49326 533 aa8.26□□□□□ -1.09
KPNA1-201ENST00000344337 PDIK1LQ8N165 341 aa8.26□□□□□ -1.09
KPNA1-201ENST00000344337 UBA3Q8TBC4 463 aa8.26□□□□□ -1.09
KPNA1-201ENST00000344337 MTRQ99707 1265 aa8.26□□□□□ -1.09
KPNA1-201ENST00000344337 FAM49BQ9NUQ9 324 aa8.26□□□□□ -1.09
KPNA1-201ENST00000344337 GTSE1Q9NYZ3 720 aa8.26□□□□□ -1.09
KPNA1-201ENST00000344337 NEU2Q9Y3R4 380 aa8.26□□□□□ -1.09
KPNA1-201ENST00000344337 KIF3CO14782 793 aa8.26□□□□□ -1.09
KPNA1-201ENST00000344337 SPTLC1O15269 473 aa8.26□□□□□ -1.09
KPNA1-201ENST00000344337 GLE1Q53GS7 698 aaKnown RBP8.26□□□□□ -1.09
KPNA1-201ENST00000344337 GABBR1Q9UBS5 961 aa8.26□□□□□ -1.09
KPNA1-201ENST00000344337 ZC3H13Q5T200 1668 aaKnown RBP8.26□□□□□ -1.09
KPNA1-201ENST00000344337 ZNF263O14978 683 aa8.26□□□□□ -1.09
KPNA1-201ENST00000344337 PHEXP78562 749 aa8.26□□□□□ -1.09
KPNA1-201ENST00000344337 WDR93Q6P2C0 686 aa8.26□□□□□ -1.09
KPNA1-201ENST00000344337 SLC30A9Q6PML9 568 aa8.26□□□□□ -1.09
KPNA1-201ENST00000344337 CRLF3Q8IUI8 442 aa8.26□□□□□ -1.09
KPNA1-201ENST00000344337 ZNF280CQ8ND82 737 aa8.26□□□□□ -1.09
KPNA1-201ENST00000344337 TTC8Q8TAM2 541 aa8.26□□□□□ -1.09
KPNA1-201ENST00000344337 SMAD5Q99717 465 aaKnown RBP8.26□□□□□ -1.09
KPNA1-201ENST00000344337 POLR3CQ9BUI4 534 aaPredicted RBP8.26□□□□□ -1.09
KPNA1-201ENST00000344337 RAB6BQ9NRW1 208 aa8.26□□□□□ -1.09
KPNA1-201ENST00000344337 AURKCQ9UQB9 309 aa8.26□□□□□ -1.09
KPNA1-201ENST00000344337 PODXLO00592 558 aa8.26□□□□□ -1.09
KPNA1-201ENST00000344337 NQO1P15559 274 aaKnown RBP8.26□□□□□ -1.09
KPNA1-201ENST00000344337 OCRLQ01968 901 aa8.26□□□□□ -1.09
KPNA1-201ENST00000344337 AP1B1Q10567 949 aa8.26□□□□□ -1.09
KPNA1-201ENST00000344337 TCHHL1Q5QJ38 904 aaPredicted RBP8.26□□□□□ -1.09
KPNA1-201ENST00000344337 C11orf63Q6NUN7 778 aa8.26□□□□□ -1.09
KPNA1-201ENST00000344337 DGKHQ86XP1 1220 aa8.26□□□□□ -1.09
KPNA1-201ENST00000344337 CPNE8Q86YQ8 564 aa8.26□□□□□ -1.09
KPNA1-201ENST00000344337 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.26□□□□□ -1.09
KPNA1-201ENST00000344337 EMID1Q96A84 441 aaPredicted RBP8.26□□□□□ -1.09
KPNA1-201ENST00000344337 ISCUQ9H1K1 167 aa8.26□□□□□ -1.09
KPNA1-201ENST00000344337 CDC42EP4Q9H3Q1 356 aaKnown RBP8.26□□□□□ -1.09
KPNA1-201ENST00000344337 HSPBP1Q9NZL4 362 aa8.26□□□□□ -1.09
KPNA1-201ENST00000344337 ARL2BPQ9Y2Y0 163 aa8.26□□□□□ -1.09
KPNA1-201ENST00000344337 SYNGAP1Q96PV0 1343 aa8.26□□□□□ -1.09
KPNA1-201ENST00000344337 CYTH3O43739 400 aa8.26□□□□□ -1.09
KPNA1-201ENST00000344337 APBA3O96018 575 aa8.26□□□□□ -1.09
KPNA1-201ENST00000344337 PYGMP11217 842 aa8.26□□□□□ -1.09
KPNA1-201ENST00000344337 RASA1P20936 1047 aa8.26□□□□□ -1.09
KPNA1-201ENST00000344337 RPL21P46778 160 aaKnown RBP8.26□□□□□ -1.09
KPNA1-201ENST00000344337 BMPR2Q13873 1038 aa8.26□□□□□ -1.09
KPNA1-201ENST00000344337 RWDD4Q6NW29 188 aaKnown RBP8.26□□□□□ -1.09
KPNA1-201ENST00000344337 ANKARQ7Z5J8 1434 aa8.26□□□□□ -1.09
KPNA1-201ENST00000344337 FAM71DQ8N9W8 422 aa8.26□□□□□ -1.09
KPNA1-201ENST00000344337 KNL1Q8NG31 2342 aa8.26□□□□□ -1.09
KPNA1-201ENST00000344337 USP33Q8TEY7 942 aa8.26□□□□□ -1.09
KPNA1-201ENST00000344337 LRGUKQ96M69 825 aa8.26□□□□□ -1.09
KPNA1-201ENST00000344337 PURBQ96QR8 312 aaKnown RBP8.26□□□□□ -1.09
KPNA1-201ENST00000344337 BRIP1Q9BX63 1249 aa8.26□□□□□ -1.09
KPNA1-201ENST00000344337 TSPYL2Q9H2G4 693 aaPredicted RBP8.26□□□□□ -1.09
KPNA1-201ENST00000344337 IL17RBQ9NRM6 502 aa8.26□□□□□ -1.09
KPNA1-201ENST00000344337 LINC00854A0A1B0GVQ3 168 aa8.26□□□□□ -1.09
KPNA1-201ENST00000344337 A6NJR5 290 aa8.26□□□□□ -1.09
KPNA1-201ENST00000344337 PPEF1O14829 653 aaPredicted RBP8.26□□□□□ -1.09
KPNA1-201ENST00000344337 KCNN4O15554 427 aa8.26□□□□□ -1.09
KPNA1-201ENST00000344337 ARPP19P56211 112 aa8.26□□□□□ -1.09
KPNA1-201ENST00000344337 COPS2P61201 443 aa8.26□□□□□ -1.09
KPNA1-201ENST00000344337 KLC1Q07866 573 aa8.26□□□□□ -1.09
KPNA1-201ENST00000344337 PAPD7Q5XG87 772 aaKnown RBP8.26□□□□□ -1.09
KPNA1-201ENST00000344337 GALNT17Q6IS24 598 aa8.26□□□□□ -1.09
KPNA1-201ENST00000344337 CES3Q6UWW8 571 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms