RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 PCYT2Q99447 389 aa14.72□□□□□ -0.05
HERPUD1-202ENST00000344114 NAA15Q9BXJ9 866 aaKnown RBP14.72□□□□□ -0.05
HERPUD1-202ENST00000344114 LARSQ9P2J5 1176 aaKnown RBP14.72□□□□□ -0.05
HERPUD1-202ENST00000344114 GABBR1Q9UBS5 961 aa14.72□□□□□ -0.05
HERPUD1-202ENST00000344114 PCDHGC5Q9Y5F6 944 aa14.72□□□□□ -0.05
HERPUD1-202ENST00000344114 ZDBF2Q9HCK1 2354 aa14.71□□□□□ -0.05
HERPUD1-202ENST00000344114 PES1O00541 588 aaKnown RBP14.71□□□□□ -0.06
HERPUD1-202ENST00000344114 CETN3O15182 167 aa14.71□□□□□ -0.06
HERPUD1-202ENST00000344114 GFRA3O60609 400 aa14.71□□□□□ -0.06
HERPUD1-202ENST00000344114 USO1O60763 962 aaKnown RBP14.71□□□□□ -0.06
HERPUD1-202ENST00000344114 ATG7O95352 703 aa14.71□□□□□ -0.06
HERPUD1-202ENST00000344114 GATMP50440 423 aa14.71□□□□□ -0.06
HERPUD1-202ENST00000344114 IGBP1P78318 339 aa14.71□□□□□ -0.06
HERPUD1-202ENST00000344114 PTPN21Q16825 1174 aa14.71□□□□□ -0.06
HERPUD1-202ENST00000344114 CCDC40Q4G0X9 1142 aa14.71□□□□□ -0.06
HERPUD1-202ENST00000344114 XKR9Q5GH70 373 aa14.71□□□□□ -0.06
HERPUD1-202ENST00000344114 ODR4Q5SWX8 454 aa14.71□□□□□ -0.06
HERPUD1-202ENST00000344114 FAM43BQ6ZT52 329 aaPredicted RBP14.71□□□□□ -0.06
HERPUD1-202ENST00000344114 VN1R2Q8NFZ6 395 aa14.71□□□□□ -0.06
HERPUD1-202ENST00000344114 GLG1Q92896 1179 aa14.71□□□□□ -0.06
HERPUD1-202ENST00000344114 ZBTB10Q96DT7 871 aa14.71□□□□□ -0.06
HERPUD1-202ENST00000344114 RPGRIP1Q96KN7 1286 aa14.71□□□□□ -0.06
HERPUD1-202ENST00000344114 ERGIC2Q96RQ1 377 aa14.71□□□□□ -0.06
HERPUD1-202ENST00000344114 FIZ1Q96SL8 496 aa14.71□□□□□ -0.06
HERPUD1-202ENST00000344114 CDCA3Q99618 268 aaPredicted RBP14.71□□□□□ -0.06
HERPUD1-202ENST00000344114 FAM49AQ9H0Q0 323 aaPredicted RBP14.71□□□□□ -0.06
HERPUD1-202ENST00000344114 IRF2BPLQ9H1B7 796 aa14.71□□□□□ -0.06
HERPUD1-202ENST00000344114 TLE6Q9H808 572 aa14.71□□□□□ -0.06
HERPUD1-202ENST00000344114 FAM86C1Q9NVL1 165 aa14.71□□□□□ -0.06
HERPUD1-202ENST00000344114 PCDHB13Q9Y5F0 798 aa14.71□□□□□ -0.06
HERPUD1-202ENST00000344114 ZMYM2Q9UBW7 1377 aa14.7□□□□□ -0.06
HERPUD1-202ENST00000344114 M0QZ92 97 aa14.7□□□□□ -0.06
HERPUD1-202ENST00000344114 BACH1O14867 736 aa14.7□□□□□ -0.06
HERPUD1-202ENST00000344114 SLC16A3O15427 465 aaKnown RBP14.7□□□□□ -0.06
HERPUD1-202ENST00000344114 ARHGAP6O43182 974 aa14.7□□□□□ -0.06
HERPUD1-202ENST00000344114 CCP110O43303 1012 aa14.7□□□□□ -0.06
HERPUD1-202ENST00000344114 STX10O60499 249 aa14.7□□□□□ -0.06
HERPUD1-202ENST00000344114 PRPF6O94906 941 aaKnown RBP14.7□□□□□ -0.06
HERPUD1-202ENST00000344114 GYPCP04921 128 aa14.7□□□□□ -0.06
HERPUD1-202ENST00000344114 NR2F2P24468 414 aa14.7□□□□□ -0.06
HERPUD1-202ENST00000344114 RPL13P26373 211 aaKnown RBP14.7□□□□□ -0.06
HERPUD1-202ENST00000344114 AVPR2P30518 371 aa14.7□□□□□ -0.06
HERPUD1-202ENST00000344114 RBM10P98175 930 aaKnown RBP14.7□□□□□ -0.06
HERPUD1-202ENST00000344114 PRKCEQ02156 737 aa14.7□□□□□ -0.06
HERPUD1-202ENST00000344114 TBC1D8BQ0IIM8 1120 aa14.7□□□□□ -0.06
HERPUD1-202ENST00000344114 PAK2Q13177 524 aa14.7□□□□□ -0.06
HERPUD1-202ENST00000344114 KCNC3Q14003 757 aa14.7□□□□□ -0.06
HERPUD1-202ENST00000344114 DUSP6Q16828 381 aa14.7□□□□□ -0.06
HERPUD1-202ENST00000344114 VWA3BQ502W6 1294 aa14.7□□□□□ -0.06
HERPUD1-202ENST00000344114 ZNF720Q7Z2F6 126 aa14.7□□□□□ -0.06
HERPUD1-202ENST00000344114 TMEM139Q8IV31 216 aa14.7□□□□□ -0.06
HERPUD1-202ENST00000344114 CCDC60Q8IWA6 550 aaPredicted RBP14.7□□□□□ -0.06
HERPUD1-202ENST00000344114 DAW1Q8N136 415 aa14.7□□□□□ -0.06
HERPUD1-202ENST00000344114 GOLGA5Q8TBA6 731 aa14.7□□□□□ -0.06
HERPUD1-202ENST00000344114 NUP58Q9BVL2 599 aa14.7□□□□□ -0.06
HERPUD1-202ENST00000344114 CELF4Q9BZC1 486 aaKnown RBP14.7□□□□□ -0.06
HERPUD1-202ENST00000344114 SMIM35A0A1B0GVV1 85 aa14.69□□□□□ -0.06
HERPUD1-202ENST00000344114 K7ENM7 598 aa14.69□□□□□ -0.06
HERPUD1-202ENST00000344114 FSCN2O14926 492 aa14.69□□□□□ -0.06
HERPUD1-202ENST00000344114 PER2O15055 1255 aa14.69□□□□□ -0.06
HERPUD1-202ENST00000344114 ZNF862O60290 1169 aa14.69□□□□□ -0.06
HERPUD1-202ENST00000344114 OFD1O75665 1012 aa14.69□□□□□ -0.06
HERPUD1-202ENST00000344114 PPP1R37O75864 691 aa14.69□□□□□ -0.06
HERPUD1-202ENST00000344114 PLS3P13797 630 aa14.69□□□□□ -0.06
HERPUD1-202ENST00000344114 NMT1P30419 496 aaKnown RBP14.69□□□□□ -0.06
HERPUD1-202ENST00000344114 HOXD13P35453 343 aa14.69□□□□□ -0.06
HERPUD1-202ENST00000344114 NUBP1P53384 320 aa14.69□□□□□ -0.06
HERPUD1-202ENST00000344114 PPP2R3AQ06190 1150 aa14.69□□□□□ -0.06
HERPUD1-202ENST00000344114 TMEM62Q0P6H9 643 aa14.69□□□□□ -0.06
HERPUD1-202ENST00000344114 ADAM9Q13443 819 aa14.69□□□□□ -0.06
HERPUD1-202ENST00000344114 FIGNQ5HY92 759 aa14.69□□□□□ -0.06
HERPUD1-202ENST00000344114 SWSAP1Q6NVH7 229 aa14.69□□□□□ -0.06
HERPUD1-202ENST00000344114 TMEM184AQ6ZMB5 413 aa14.69□□□□□ -0.06
HERPUD1-202ENST00000344114 ANO5Q75V66 913 aa14.69□□□□□ -0.06
HERPUD1-202ENST00000344114 C17orf53Q8N3J3 647 aaPredicted RBP14.69□□□□□ -0.06
HERPUD1-202ENST00000344114 HVCN1Q96D96 273 aa14.69□□□□□ -0.06
HERPUD1-202ENST00000344114 BAG1Q99933 345 aaPredicted RBP14.69□□□□□ -0.06
HERPUD1-202ENST00000344114 STRA6Q9BX79 667 aa14.69□□□□□ -0.06
HERPUD1-202ENST00000344114 S1PR5Q9H228 398 aa14.69□□□□□ -0.06
HERPUD1-202ENST00000344114 NDST4Q9H3R1 872 aa14.69□□□□□ -0.06
HERPUD1-202ENST00000344114 ST6GALNAC4Q9H4F1 302 aa14.69□□□□□ -0.06
HERPUD1-202ENST00000344114 ZNF302Q9NR11 478 aa14.69□□□□□ -0.06
HERPUD1-202ENST00000344114 TLR9Q9NR96 1032 aa14.69□□□□□ -0.06
HERPUD1-202ENST00000344114 LRFN2Q9ULH4 789 aa14.69□□□□□ -0.06
HERPUD1-202ENST00000344114 PCDHB12Q9Y5F1 795 aa14.69□□□□□ -0.06
HERPUD1-202ENST00000344114 MYH10P35580 1976 aa14.68□□□□□ -0.06
HERPUD1-202ENST00000344114 IGKV6D-21A0A0A0MT36 114 aa14.68□□□□□ -0.06
HERPUD1-202ENST00000344114 SFI1A8K8P3 1242 aa14.68□□□□□ -0.06
HERPUD1-202ENST00000344114 PROB1E7EW31 1015 aa14.68□□□□□ -0.06
HERPUD1-202ENST00000344114 DGAT1O75907 488 aa14.68□□□□□ -0.06
HERPUD1-202ENST00000344114 STBD1O95210 358 aa14.68□□□□□ -0.06
HERPUD1-202ENST00000344114 FECHP22830 423 aa14.68□□□□□ -0.06
HERPUD1-202ENST00000344114 CASP14P31944 242 aa14.68□□□□□ -0.06
HERPUD1-202ENST00000344114 ADKP55263 362 aaKnown RBP14.68□□□□□ -0.06
HERPUD1-202ENST00000344114 ERVFC1P60507 584 aa14.68□□□□□ -0.06
HERPUD1-202ENST00000344114 PLCB4Q15147 1175 aa14.68□□□□□ -0.06
HERPUD1-202ENST00000344114 XKR3Q5GH77 459 aa14.68□□□□□ -0.06
HERPUD1-202ENST00000344114 FAM160B1Q5W0V3 765 aa14.68□□□□□ -0.06
HERPUD1-202ENST00000344114 CEP135Q66GS9 1140 aa14.68□□□□□ -0.06
HERPUD1-202ENST00000344114 PLA2G4FQ68DD2 849 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms