RNA–Protein interactions for RNA: ENST00000343139.9

HLA-DQA1-201, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-201ENST00000343139 TIGD1Q96MW7 591 aa14.27□□□□□ -0.12
HLA-DQA1-201ENST00000343139 COLEC11Q9BWP8 271 aa14.27□□□□□ -0.12
HLA-DQA1-201ENST00000343139 BLZF1Q9H2G9 400 aa14.27□□□□□ -0.12
HLA-DQA1-201ENST00000343139 TBC1D7Q9P0N9 293 aa14.27□□□□□ -0.12
HLA-DQA1-201ENST00000343139 COG5Q9UP83 839 aa14.27□□□□□ -0.12
HLA-DQA1-201ENST00000343139 NLRC5Q86WI3 1866 aa14.27□□□□□ -0.13
HLA-DQA1-201ENST00000343139 TTC26A0AVF1 554 aa14.26□□□□□ -0.13
HLA-DQA1-201ENST00000343139 ANKRD63C9JTQ0 380 aa14.26□□□□□ -0.13
HLA-DQA1-201ENST00000343139 TMEM189-UBE2V1I3L0A0 370 aa14.26□□□□□ -0.13
HLA-DQA1-201ENST00000343139 KLRC4O43908 158 aa14.26□□□□□ -0.13
HLA-DQA1-201ENST00000343139 ADSSP30520 456 aa14.26□□□□□ -0.13
HLA-DQA1-201ENST00000343139 MATR3P43243 847 aaKnown RBP eCLIP14.26□□□□□ -0.13
HLA-DQA1-201ENST00000343139 KCNA1Q09470 495 aa14.26□□□□□ -0.13
HLA-DQA1-201ENST00000343139 SNW1Q13573 536 aaKnown RBP14.26□□□□□ -0.13
HLA-DQA1-201ENST00000343139 SLC10A6Q3KNW5 377 aa14.26□□□□□ -0.13
HLA-DQA1-201ENST00000343139 CLEC17AQ6ZS10 378 aa14.26□□□□□ -0.13
HLA-DQA1-201ENST00000343139 TMEM173Q86WV6 379 aaPredicted RBP14.26□□□□□ -0.13
HLA-DQA1-201ENST00000343139 RNF168Q8IYW5 571 aaPredicted RBP14.26□□□□□ -0.13
HLA-DQA1-201ENST00000343139 CDCA3Q99618 268 aaPredicted RBP14.26□□□□□ -0.13
HLA-DQA1-201ENST00000343139 MSTO1Q9BUK6 570 aa14.26□□□□□ -0.13
HLA-DQA1-201ENST00000343139 MARCH5Q9NX47 278 aa14.26□□□□□ -0.13
HLA-DQA1-201ENST00000343139 CPSF3Q9UKF6 684 aaKnown RBP14.26□□□□□ -0.13
HLA-DQA1-201ENST00000343139 MYO9BQ13459 2157 aa14.26□□□□□ -0.13
HLA-DQA1-201ENST00000343139 PRRC2BQ5JSZ5 2229 aaKnown RBP14.26□□□□□ -0.13
HLA-DQA1-201ENST00000343139 NT5C1B-RDH14C9J2C7 533 aa14.26□□□□□ -0.13
HLA-DQA1-201ENST00000343139 LDHAP00338 332 aaKnown RBP14.26□□□□□ -0.13
HLA-DQA1-201ENST00000343139 OR1G1P47890 313 aa14.26□□□□□ -0.13
HLA-DQA1-201ENST00000343139 ERVFC1P60507 584 aa14.26□□□□□ -0.13
HLA-DQA1-201ENST00000343139 OSTNP61366 133 aa14.26□□□□□ -0.13
HLA-DQA1-201ENST00000343139 DPYDQ12882 1025 aa14.26□□□□□ -0.13
HLA-DQA1-201ENST00000343139 TCEAL5Q5H9L2 206 aa14.26□□□□□ -0.13
HLA-DQA1-201ENST00000343139 GRAMD1CQ8IYS0 662 aa14.26□□□□□ -0.13
HLA-DQA1-201ENST00000343139 TMEM174Q8WUU8 243 aa14.26□□□□□ -0.13
HLA-DQA1-201ENST00000343139 BCL7CQ8WUZ0 217 aaPredicted RBP14.26□□□□□ -0.13
HLA-DQA1-201ENST00000343139 DDX27Q96GQ7 796 aaKnown RBP14.26□□□□□ -0.13
HLA-DQA1-201ENST00000343139 TCF25Q9BQ70 676 aa14.26□□□□□ -0.13
HLA-DQA1-201ENST00000343139 FGFBP2Q9BYJ0 223 aa14.26□□□□□ -0.13
HLA-DQA1-201ENST00000343139 ZBP1Q9H171 429 aa14.26□□□□□ -0.13
HLA-DQA1-201ENST00000343139 CGNQ9P2M7 1197 aaKnown RBP14.26□□□□□ -0.13
HLA-DQA1-201ENST00000343139 AGO2Q9UKV8 859 aaKnown RBP14.26□□□□□ -0.13
HLA-DQA1-201ENST00000343139 MYH11P35749 1972 aa14.25□□□□□ -0.13
HLA-DQA1-201ENST00000343139 SPTBN5Q9NRC6 3674 aaKnown RBP14.25□□□□□ -0.13
HLA-DQA1-201ENST00000343139 MEFVO15553 781 aaPredicted RBP14.25□□□□□ -0.13
HLA-DQA1-201ENST00000343139 SOD2P04179 222 aa14.25□□□□□ -0.13
HLA-DQA1-201ENST00000343139 CTSAP10619 480 aa14.25□□□□□ -0.13
HLA-DQA1-201ENST00000343139 HARSP12081 509 aaKnown RBP14.25□□□□□ -0.13
HLA-DQA1-201ENST00000343139 CYP3A5P20815 502 aa14.25□□□□□ -0.13
HLA-DQA1-201ENST00000343139 CASP1P29466 404 aa14.25□□□□□ -0.13
HLA-DQA1-201ENST00000343139 RPL9P32969 192 aaKnown RBP14.25□□□□□ -0.13
HLA-DQA1-201ENST00000343139 IRS1P35568 1242 aa14.25□□□□□ -0.13
HLA-DQA1-201ENST00000343139 HSP90AA2PQ14568 343 aaPredicted RBP14.25□□□□□ -0.13
HLA-DQA1-201ENST00000343139 SMC1AQ14683 1233 aaKnown RBP14.25□□□□□ -0.13
HLA-DQA1-201ENST00000343139 KCNB1Q14721 858 aa14.25□□□□□ -0.13
HLA-DQA1-201ENST00000343139 CCDC85BQ15834 202 aaPredicted RBP14.25□□□□□ -0.13
HLA-DQA1-201ENST00000343139 CTC1Q2NKJ3 1217 aa14.25□□□□□ -0.13
HLA-DQA1-201ENST00000343139 SYCP3Q8IZU3 236 aa14.25□□□□□ -0.13
HLA-DQA1-201ENST00000343139 MICALL1Q8N3F8 863 aa14.25□□□□□ -0.13
HLA-DQA1-201ENST00000343139 MRPL43Q8N983 215 aaKnown RBP14.25□□□□□ -0.13
HLA-DQA1-201ENST00000343139 SCFD1Q8WVM8 642 aa14.25□□□□□ -0.13
HLA-DQA1-201ENST00000343139 POMGNT1Q8WZA1 660 aa14.25□□□□□ -0.13
HLA-DQA1-201ENST00000343139 ASB7Q9H672 318 aa14.25□□□□□ -0.13
HLA-DQA1-201ENST00000343139 RPF1Q9H9Y2 349 aaKnown RBP14.25□□□□□ -0.13
HLA-DQA1-201ENST00000343139 EXOC1Q9NV70 894 aa14.25□□□□□ -0.13
HLA-DQA1-201ENST00000343139 ADAM28Q9UKQ2 775 aa14.25□□□□□ -0.13
HLA-DQA1-201ENST00000343139 SSX2IPQ9Y2D8 614 aa14.25□□□□□ -0.13
HLA-DQA1-201ENST00000343139 DERAQ9Y315 318 aa14.25□□□□□ -0.13
HLA-DQA1-201ENST00000343139 KIAA1671Q9BY89 1806 aa14.25□□□□□ -0.13
HLA-DQA1-201ENST00000343139 EYSQ5T1H1 3165 aa14.25□□□□□ -0.13
HLA-DQA1-201ENST00000343139 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.24□□□□□ -0.13
HLA-DQA1-201ENST00000343139 PRPF6O94906 941 aaKnown RBP14.24□□□□□ -0.13
HLA-DQA1-201ENST00000343139 RHOBTB3O94955 611 aa14.24□□□□□ -0.13
HLA-DQA1-201ENST00000343139 RPN1P04843 607 aaKnown RBP14.24□□□□□ -0.13
HLA-DQA1-201ENST00000343139 HOXD13P35453 343 aa14.24□□□□□ -0.13
HLA-DQA1-201ENST00000343139 PPP2R3AQ06190 1150 aa14.24□□□□□ -0.13
HLA-DQA1-201ENST00000343139 ELAVL2Q12926 359 aaKnown RBP14.24□□□□□ -0.13
HLA-DQA1-201ENST00000343139 ZBTB6Q15916 424 aa14.24□□□□□ -0.13
HLA-DQA1-201ENST00000343139 ENOX2Q16206 610 aaKnown RBP14.24□□□□□ -0.13
HLA-DQA1-201ENST00000343139 UPP1Q16831 310 aa14.24□□□□□ -0.13
HLA-DQA1-201ENST00000343139 KMT5BQ4FZB7 885 aa14.24□□□□□ -0.13
HLA-DQA1-201ENST00000343139 DCLRE1AQ6PJP8 1040 aa14.24□□□□□ -0.13
HLA-DQA1-201ENST00000343139 TMC7Q7Z402 723 aa14.24□□□□□ -0.13
HLA-DQA1-201ENST00000343139 NT5DC4Q86YG4 428 aa14.24□□□□□ -0.13
HLA-DQA1-201ENST00000343139 VPS52Q8N1B4 723 aa14.24□□□□□ -0.13
HLA-DQA1-201ENST00000343139 MICAL1Q8TDZ2 1067 aa14.24□□□□□ -0.13
HLA-DQA1-201ENST00000343139 ATXN2LQ8WWM7 1075 aaKnown RBP14.24□□□□□ -0.13
HLA-DQA1-201ENST00000343139 HLA-CQ95604 372 aa14.24□□□□□ -0.13
HLA-DQA1-201ENST00000343139 HPS3Q969F9 1004 aa14.24□□□□□ -0.13
HLA-DQA1-201ENST00000343139 CCDC47Q96A33 483 aaKnown RBP14.24□□□□□ -0.13
HLA-DQA1-201ENST00000343139 PABPC5Q96DU9 382 aaKnown RBP14.24□□□□□ -0.13
HLA-DQA1-201ENST00000343139 ZMAT2Q96NC0 199 aaKnown RBP14.24□□□□□ -0.13
HLA-DQA1-201ENST00000343139 VN1R3Q9BXE9 311 aa14.24□□□□□ -0.13
HLA-DQA1-201ENST00000343139 CXCL16Q9H2A7 254 aa14.24□□□□□ -0.13
HLA-DQA1-201ENST00000343139 ENTPD7Q9NQZ7 604 aa14.24□□□□□ -0.13
HLA-DQA1-201ENST00000343139 HOOK1Q9UJC3 728 aaKnown RBP14.24□□□□□ -0.13
HLA-DQA1-201ENST00000343139 PRG3Q9Y2Y8 225 aaPredicted RBP14.24□□□□□ -0.13
HLA-DQA1-201ENST00000343139 TISP43B9A030 160 aa14.23□□□□□ -0.13
HLA-DQA1-201ENST00000343139 XPOTO43592 962 aaKnown RBP14.23□□□□□ -0.13
HLA-DQA1-201ENST00000343139 KIF20AO95235 890 aa14.23□□□□□ -0.13
HLA-DQA1-201ENST00000343139 C1RP00736 705 aa14.23□□□□□ -0.13
HLA-DQA1-201ENST00000343139 CXCL8P10145 99 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms