RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 SLC15A2Q16348 729 aa15.85■□□□□ 0.13
UBE3B-202ENST00000342494 RABL6Q3YEC7 729 aaPredicted RBP15.85■□□□□ 0.13
UBE3B-202ENST00000342494 MEI1Q5TIA1 1274 aa15.85■□□□□ 0.13
UBE3B-202ENST00000342494 AGPAT1Q99943 283 aa15.85■□□□□ 0.13
UBE3B-202ENST00000342494 ABCB6Q9NP58 842 aa15.85■□□□□ 0.13
UBE3B-202ENST00000342494 ANGPTL2Q9UKU9 493 aa15.85■□□□□ 0.13
UBE3B-202ENST00000342494 SUFUQ9UMX1 484 aa15.85■□□□□ 0.13
UBE3B-202ENST00000342494 PCDHGB4Q9UN71 923 aa15.85■□□□□ 0.13
UBE3B-202ENST00000342494 NRKQ7Z2Y5 1582 aa15.85■□□□□ 0.13
UBE3B-202ENST00000342494 C1orf167Q5SNV9 1468 aa15.85■□□□□ 0.13
UBE3B-202ENST00000342494 PYGLP06737 847 aa15.85■□□□□ 0.13
UBE3B-202ENST00000342494 KRT17Q04695 432 aa15.85■□□□□ 0.13
UBE3B-202ENST00000342494 NCOA4Q13772 614 aa15.85■□□□□ 0.13
UBE3B-202ENST00000342494 SGSM1Q2NKQ1 1148 aa15.85■□□□□ 0.13
UBE3B-202ENST00000342494 MUC3BQ9H195 1237 aa15.85■□□□□ 0.13
UBE3B-202ENST00000342494 PCDHB7Q9Y5E2 793 aa15.85■□□□□ 0.13
UBE3B-202ENST00000342494 DCTN3O75935 186 aa15.85■□□□□ 0.13
UBE3B-202ENST00000342494 KITP10721 976 aa15.85■□□□□ 0.13
UBE3B-202ENST00000342494 PYGBP11216 843 aa15.85■□□□□ 0.13
UBE3B-202ENST00000342494 SDE2Q6IQ49 451 aa15.85■□□□□ 0.13
UBE3B-202ENST00000342494 ANKS3Q6ZW76 656 aa15.85■□□□□ 0.13
UBE3B-202ENST00000342494 MFN1Q8IWA4 741 aa15.85■□□□□ 0.13
UBE3B-202ENST00000342494 RFFLQ8WZ73 363 aa15.85■□□□□ 0.13
UBE3B-202ENST00000342494 CCDC195A0A1B0GUA6 201 aa15.85■□□□□ 0.13
UBE3B-202ENST00000342494 TBX3O15119 743 aa15.85■□□□□ 0.13
UBE3B-202ENST00000342494 KCNA2P16389 499 aa15.85■□□□□ 0.13
UBE3B-202ENST00000342494 SCP2P22307 547 aa15.85■□□□□ 0.13
UBE3B-202ENST00000342494 PCSK1P29120 753 aa15.85■□□□□ 0.13
UBE3B-202ENST00000342494 TYK2P29597 1187 aa15.85■□□□□ 0.13
UBE3B-202ENST00000342494 GUCY1A2P33402 732 aa15.85■□□□□ 0.13
UBE3B-202ENST00000342494 IL31Q6EBC2 164 aa15.85■□□□□ 0.13
UBE3B-202ENST00000342494 C16orf86Q6ZW13 317 aa15.85■□□□□ 0.13
UBE3B-202ENST00000342494 TBC1D1Q86TI0 1168 aaPredicted RBP15.85■□□□□ 0.13
UBE3B-202ENST00000342494 PIP4K2CQ8TBX8 421 aa15.85■□□□□ 0.13
UBE3B-202ENST00000342494 ANLNQ9NQW6 1124 aa15.85■□□□□ 0.13
UBE3B-202ENST00000342494 HBP1O60381 514 aa15.85■□□□□ 0.13
UBE3B-202ENST00000342494 AKT1P31749 480 aa15.85■□□□□ 0.13
UBE3B-202ENST00000342494 GTF2A2P52657 109 aa15.85■□□□□ 0.13
UBE3B-202ENST00000342494 HDLBPQ00341 1268 aaKnown RBP15.85■□□□□ 0.13
UBE3B-202ENST00000342494 EFCAB12Q6NXP0 572 aa15.85■□□□□ 0.13
UBE3B-202ENST00000342494 BARGINQ6ZT62 677 aa15.85■□□□□ 0.13
UBE3B-202ENST00000342494 AGBL3Q8NEM8 1001 aa15.85■□□□□ 0.13
UBE3B-202ENST00000342494 PPHLN1Q8NEY8 458 aaKnown RBP15.85■□□□□ 0.13
UBE3B-202ENST00000342494 TET3O43151 1660 aa15.84■□□□□ 0.13
UBE3B-202ENST00000342494 SLC16A3O15427 465 aaKnown RBP15.84■□□□□ 0.13
UBE3B-202ENST00000342494 SYF2O95926 243 aaKnown RBP15.84■□□□□ 0.13
UBE3B-202ENST00000342494 PDGFRAP16234 1089 aa15.84■□□□□ 0.13
UBE3B-202ENST00000342494 MAP4P27816 1152 aaKnown RBP15.84■□□□□ 0.13
UBE3B-202ENST00000342494 SV2CQ496J9 727 aa15.84■□□□□ 0.13
UBE3B-202ENST00000342494 ATP11CQ8NB49 1132 aa15.84■□□□□ 0.13
UBE3B-202ENST00000342494 POLR3CQ9BUI4 534 aaPredicted RBP15.84■□□□□ 0.13
UBE3B-202ENST00000342494 USP31Q70CQ4 1352 aa15.84■□□□□ 0.13
UBE3B-202ENST00000342494 RRN3P2A6NIE6 340 aa15.84■□□□□ 0.13
UBE3B-202ENST00000342494 C3orf70A6NLC5 250 aaPredicted RBP15.84■□□□□ 0.13
UBE3B-202ENST00000342494 GRAMD1BQ3KR37 738 aa15.84■□□□□ 0.13
UBE3B-202ENST00000342494 ATF7IP2Q5U623 682 aa15.84■□□□□ 0.13
UBE3B-202ENST00000342494 NRBF2Q96F24 287 aa15.84■□□□□ 0.13
UBE3B-202ENST00000342494 TSSK1BQ9BXA7 367 aa15.84■□□□□ 0.13
UBE3B-202ENST00000342494 WDR35Q9P2L0 1181 aa15.84■□□□□ 0.13
UBE3B-202ENST00000342494 MMEP08473 750 aa15.84■□□□□ 0.13
UBE3B-202ENST00000342494 DDX5P17844 614 aaKnown RBP15.84■□□□□ 0.13
UBE3B-202ENST00000342494 MAP2K2P36507 400 aa15.84■□□□□ 0.13
UBE3B-202ENST00000342494 EIF3EP60228 445 aaKnown RBP15.84■□□□□ 0.13
UBE3B-202ENST00000342494 SARM1Q6SZW1 724 aa15.84■□□□□ 0.13
UBE3B-202ENST00000342494 FAM47EQ6ZV65 393 aa15.84■□□□□ 0.13
UBE3B-202ENST00000342494 ATG4CQ96DT6 458 aa15.84■□□□□ 0.13
UBE3B-202ENST00000342494 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.84■□□□□ 0.131e-6■■■■■ 33.9
UBE3B-202ENST00000342494 MOV10L1Q9BXT6 1211 aaKnown RBP15.84■□□□□ 0.13
UBE3B-202ENST00000342494 HIST1H2AGP0C0S8 130 aaPredicted RBP15.84■□□□□ 0.13
UBE3B-202ENST00000342494 HIST1H2ADP20671 130 aa15.84■□□□□ 0.13
UBE3B-202ENST00000342494 ALDH1A3P47895 512 aa15.84■□□□□ 0.13
UBE3B-202ENST00000342494 LAMC2Q13753 1193 aa15.84■□□□□ 0.13
UBE3B-202ENST00000342494 TMEM259Q4ZIN3 620 aa15.84■□□□□ 0.13
UBE3B-202ENST00000342494 ATPAF2Q8N5M1 289 aa15.84■□□□□ 0.13
UBE3B-202ENST00000342494 HIST1H2AHQ96KK5 128 aa15.84■□□□□ 0.13
UBE3B-202ENST00000342494 HIST1H2AJQ99878 128 aa15.84■□□□□ 0.13
UBE3B-202ENST00000342494 H2AFJQ9BTM1 129 aa15.84■□□□□ 0.13
UBE3B-202ENST00000342494 ASPSCR1Q9BZE9 553 aa15.84■□□□□ 0.13
UBE3B-202ENST00000342494 AAASQ9NRG9 546 aa15.84■□□□□ 0.13
UBE3B-202ENST00000342494 SFMBT1Q9UHJ3 866 aa15.84■□□□□ 0.13
UBE3B-202ENST00000342494 MAFGO15525 162 aa15.83■□□□□ 0.13
UBE3B-202ENST00000342494 IL18RAPO95256 599 aa15.83■□□□□ 0.13
UBE3B-202ENST00000342494 PMS2P54278 862 aa15.83■□□□□ 0.13
UBE3B-202ENST00000342494 ARHGEF7Q14155 803 aa15.83■□□□□ 0.13
UBE3B-202ENST00000342494 EZH2Q15910 746 aaKnown RBP15.83■□□□□ 0.13
UBE3B-202ENST00000342494 PLA2G4FQ68DD2 849 aa15.83■□□□□ 0.13
UBE3B-202ENST00000342494 DDIASQ8IXT1 998 aa15.83■□□□□ 0.13
UBE3B-202ENST00000342494 LRRC71Q8N4P6 559 aa15.83■□□□□ 0.13
UBE3B-202ENST00000342494 PABPC5Q96DU9 382 aaKnown RBP15.83■□□□□ 0.13
UBE3B-202ENST00000342494 FOPNLQ96NB1 174 aa15.83■□□□□ 0.13
UBE3B-202ENST00000342494 PRMT7Q9NVM4 692 aaPredicted RBP15.83■□□□□ 0.13
UBE3B-202ENST00000342494 SENP1Q9P0U3 644 aa15.83■□□□□ 0.13
UBE3B-202ENST00000342494 TPX2Q9ULW0 747 aaKnown RBP15.83■□□□□ 0.13
UBE3B-202ENST00000342494 CYP2C19P33261 490 aa15.83■□□□□ 0.13
UBE3B-202ENST00000342494 WASHC5Q12768 1159 aa15.83■□□□□ 0.13
UBE3B-202ENST00000342494 ADCK2Q7Z695 626 aa15.83■□□□□ 0.13
UBE3B-202ENST00000342494 C1orf54Q8WWF1 131 aa15.83■□□□□ 0.13
UBE3B-202ENST00000342494 SNF8Q96H20 258 aa15.83■□□□□ 0.13
UBE3B-202ENST00000342494 ELAC2Q9BQ52 826 aaKnown RBP15.83■□□□□ 0.13
UBE3B-202ENST00000342494 YIPF2Q9BWQ6 316 aa15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms