RNA–Protein interactions for RNA: ENST00000341394.8

CAPRIN1-201, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-201ENST00000341394 PI4K2BG5E9Z4 385 aa11.16□□□□□ -0.62
CAPRIN1-201ENST00000341394 SOCS7O14512 581 aa11.16□□□□□ -0.62
CAPRIN1-201ENST00000341394 ATF2P15336 505 aa11.16□□□□□ -0.62
CAPRIN1-201ENST00000341394 CHN1P15882 459 aa11.16□□□□□ -0.62
CAPRIN1-201ENST00000341394 GBP1P32455 592 aa11.16□□□□□ -0.62
CAPRIN1-201ENST00000341394 ATXN3P54252 364 aaPredicted RBP11.16□□□□□ -0.62
CAPRIN1-201ENST00000341394 XKR9Q5GH70 373 aa11.16□□□□□ -0.62
CAPRIN1-201ENST00000341394 DPP9Q86TI2 863 aa11.16□□□□□ -0.62
CAPRIN1-201ENST00000341394 CDHR1Q96JP9 859 aa11.16□□□□□ -0.62
CAPRIN1-201ENST00000341394 RIT2Q99578 217 aa11.16□□□□□ -0.62
CAPRIN1-201ENST00000341394 LXNQ9BS40 222 aa11.16□□□□□ -0.62
CAPRIN1-201ENST00000341394 SLC40A1Q9NP59 571 aa11.16□□□□□ -0.62
CAPRIN1-201ENST00000341394 FGFR1OP2Q9NVK5 253 aa11.16□□□□□ -0.62
CAPRIN1-201ENST00000341394 MAD1L1Q9Y6D9 718 aa11.16□□□□□ -0.62
CAPRIN1-201ENST00000341394 EPHA7Q15375 998 aa11.16□□□□□ -0.62
CAPRIN1-201ENST00000341394 ARSHQ5FYA8 562 aa11.16□□□□□ -0.62
CAPRIN1-201ENST00000341394 WDR44Q5JSH3 913 aa11.16□□□□□ -0.62
CAPRIN1-201ENST00000341394 FAM182AQ5T1J6 154 aa11.16□□□□□ -0.62
CAPRIN1-201ENST00000341394 ZNF354CQ86Y25 554 aa11.16□□□□□ -0.62
CAPRIN1-201ENST00000341394 IRF2BP1Q8IU81 584 aa11.16□□□□□ -0.62
CAPRIN1-201ENST00000341394 PALM2Q8IXS6 379 aa11.16□□□□□ -0.62
CAPRIN1-201ENST00000341394 SAMD3Q8N6K7 520 aa11.16□□□□□ -0.62
CAPRIN1-201ENST00000341394 GPRC5AQ8NFJ5 357 aa11.16□□□□□ -0.62
CAPRIN1-201ENST00000341394 LRRC8CQ8TDW0 803 aa11.16□□□□□ -0.62
CAPRIN1-201ENST00000341394 TRIM6Q9C030 488 aaPredicted RBP11.16□□□□□ -0.62
CAPRIN1-201ENST00000341394 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.16□□□□□ -0.62
CAPRIN1-201ENST00000341394 SGK1O00141 431 aa11.16□□□□□ -0.62
CAPRIN1-201ENST00000341394 SLC25A27O95847 323 aa11.16□□□□□ -0.62
CAPRIN1-201ENST00000341394 HOXA7P31268 230 aaPredicted RBP11.16□□□□□ -0.62
CAPRIN1-201ENST00000341394 GJA5P36382 358 aa11.16□□□□□ -0.62
CAPRIN1-201ENST00000341394 YWHAGP61981 247 aaKnown RBP eCLIP11.16□□□□□ -0.62
CAPRIN1-201ENST00000341394 MYL7Q01449 175 aa11.16□□□□□ -0.62
CAPRIN1-201ENST00000341394 FYB2Q5VWT5 728 aa11.16□□□□□ -0.62
CAPRIN1-201ENST00000341394 UNC13DQ70J99 1090 aa11.16□□□□□ -0.62
CAPRIN1-201ENST00000341394 RIOX2Q8IUF8 465 aa11.16□□□□□ -0.62
CAPRIN1-201ENST00000341394 PDCD7Q8N8D1 485 aaKnown RBP11.16□□□□□ -0.62
CAPRIN1-201ENST00000341394 C7orf25Q9BPX7 421 aa11.16□□□□□ -0.62
CAPRIN1-201ENST00000341394 PITPNM3Q9BZ71 974 aa11.16□□□□□ -0.62
CAPRIN1-201ENST00000341394 IKZF4Q9H2S9 585 aa11.16□□□□□ -0.62
CAPRIN1-201ENST00000341394 LOC285556D6RIA3 1793 aa11.15□□□□□ -0.62
CAPRIN1-201ENST00000341394 HMGB1P1B2RPK0 211 aaPredicted RBP11.15□□□□□ -0.62
CAPRIN1-201ENST00000341394 ATP9AO75110 1047 aa11.15□□□□□ -0.62
CAPRIN1-201ENST00000341394 CNGA1P29973 690 aa11.15□□□□□ -0.62
CAPRIN1-201ENST00000341394 PTK2Q05397 1052 aa11.15□□□□□ -0.62
CAPRIN1-201ENST00000341394 DRAP1Q14919 205 aaPredicted RBP11.15□□□□□ -0.62
CAPRIN1-201ENST00000341394 TSNAXIP1Q2TAA8 658 aa11.15□□□□□ -0.62
CAPRIN1-201ENST00000341394 BBS9Q3SYG4 887 aa11.15□□□□□ -0.62
CAPRIN1-201ENST00000341394 LDLRAD1Q5T700 205 aa11.15□□□□□ -0.62
CAPRIN1-201ENST00000341394 CCDC62Q6P9F0 684 aa11.15□□□□□ -0.62
CAPRIN1-201ENST00000341394 TRAPPC11Q7Z392 1133 aa11.15□□□□□ -0.62
CAPRIN1-201ENST00000341394 C4orf33Q8N1A6 199 aa11.15□□□□□ -0.62
CAPRIN1-201ENST00000341394 AGR3Q8TD06 166 aa11.15□□□□□ -0.62
CAPRIN1-201ENST00000341394 SLC5A5Q92911 643 aa11.15□□□□□ -0.62
CAPRIN1-201ENST00000341394 DNAJC19Q96DA6 116 aa11.15□□□□□ -0.62
CAPRIN1-201ENST00000341394 SEC16BQ96JE7 1060 aa11.15□□□□□ -0.62
CAPRIN1-201ENST00000341394 PFASO15067 1338 aa11.15□□□□□ -0.62
CAPRIN1-201ENST00000341394 MYH11P35749 1972 aa11.15□□□□□ -0.62
CAPRIN1-201ENST00000341394 TMEM150BA6NC51 233 aa11.15□□□□□ -0.62
CAPRIN1-201ENST00000341394 NOP56O00567 594 aaKnown RBP11.15□□□□□ -0.62
CAPRIN1-201ENST00000341394 BRAFP15056 766 aa11.15□□□□□ -0.62
CAPRIN1-201ENST00000341394 ZC3H18Q86VM9 953 aaKnown RBP11.15□□□□□ -0.62
CAPRIN1-201ENST00000341394 VSIG10LQ86VR7 867 aa11.15□□□□□ -0.62
CAPRIN1-201ENST00000341394 CCDC89Q8N998 374 aa11.15□□□□□ -0.62
CAPRIN1-201ENST00000341394 SAAL1Q96ER3 474 aa11.15□□□□□ -0.62
CAPRIN1-201ENST00000341394 ANAPC5Q9UJX4 755 aa11.15□□□□□ -0.62
CAPRIN1-201ENST00000341394 KCNH4Q9UQ05 1017 aa11.15□□□□□ -0.62
CAPRIN1-201ENST00000341394 CCDC195A0A1B0GUA6 201 aa11.15□□□□□ -0.63
CAPRIN1-201ENST00000341394 E2F8A0AVK6 867 aa11.15□□□□□ -0.63
CAPRIN1-201ENST00000341394 PSMD10O75832 226 aa11.15□□□□□ -0.63
CAPRIN1-201ENST00000341394 MAPK4P31152 587 aa11.15□□□□□ -0.63
CAPRIN1-201ENST00000341394 SLC8A1P32418 973 aa11.15□□□□□ -0.63
CAPRIN1-201ENST00000341394 CPA2P48052 419 aa11.15□□□□□ -0.63
CAPRIN1-201ENST00000341394 ITGB3BPQ13352 177 aaPredicted RBP11.15□□□□□ -0.63
CAPRIN1-201ENST00000341394 SCARA5Q6ZMJ2 495 aa11.15□□□□□ -0.63
CAPRIN1-201ENST00000341394 GSDMBQ8TAX9 411 aa11.15□□□□□ -0.63
CAPRIN1-201ENST00000341394 WHAMMQ8TF30 809 aa11.15□□□□□ -0.63
CAPRIN1-201ENST00000341394 POMGNT1Q8WZA1 660 aa11.15□□□□□ -0.63
CAPRIN1-201ENST00000341394 TTC17Q96AE7 1141 aa11.15□□□□□ -0.63
CAPRIN1-201ENST00000341394 ACSF2Q96CM8 615 aaPredicted RBP11.15□□□□□ -0.63
CAPRIN1-201ENST00000341394 AGO4Q9HCK5 861 aaKnown RBP11.15□□□□□ -0.63
CAPRIN1-201ENST00000341394 OSGEPQ9NPF4 335 aa11.15□□□□□ -0.63
CAPRIN1-201ENST00000341394 ADAMTS5Q9UNA0 930 aa11.15□□□□□ -0.63
CAPRIN1-201ENST00000341394 FIS1Q9Y3D6 152 aa11.15□□□□□ -0.63
CAPRIN1-201ENST00000341394 SCN4AP35499 1836 aa11.14□□□□□ -0.63
CAPRIN1-201ENST00000341394 WDR64B1ANS9 1081 aa11.14□□□□□ -0.63
CAPRIN1-201ENST00000341394 RSPH10B2B2RC85 870 aa11.14□□□□□ -0.63
CAPRIN1-201ENST00000341394 TRPA1O75762 1119 aa11.14□□□□□ -0.63
CAPRIN1-201ENST00000341394 RHOBTB3O94955 611 aa11.14□□□□□ -0.63
CAPRIN1-201ENST00000341394 FTLP02792 175 aaPredicted RBP11.14□□□□□ -0.63
CAPRIN1-201ENST00000341394 P4HBP07237 508 aaKnown RBP11.14□□□□□ -0.63
CAPRIN1-201ENST00000341394 RSPH10BP0C881 870 aa11.14□□□□□ -0.63
CAPRIN1-201ENST00000341394 FKBP1BP68106 108 aa11.14□□□□□ -0.63
CAPRIN1-201ENST00000341394 Q3C1V9 767 aa11.14□□□□□ -0.63
CAPRIN1-201ENST00000341394 MAML1Q92585 1016 aa11.14□□□□□ -0.63
CAPRIN1-201ENST00000341394 GBP5Q96PP8 586 aa11.14□□□□□ -0.63
CAPRIN1-201ENST00000341394 MAK16Q9BXY0 300 aaKnown RBP11.14□□□□□ -0.63
CAPRIN1-201ENST00000341394 EPN3Q9H201 632 aa11.14□□□□□ -0.63
CAPRIN1-201ENST00000341394 SMYD3Q9H7B4 428 aa11.14□□□□□ -0.63
CAPRIN1-201ENST00000341394 TXNDC16Q9P2K2 825 aa11.14□□□□□ -0.63
CAPRIN1-201ENST00000341394 A0A0G2JMZ2 1700 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms