RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 TRIM7Q9C029 511 aa16.63■□□□□ 0.25
MBD1-203ENST00000339998 STYXL1Q9Y6J8 313 aa16.63■□□□□ 0.25
MBD1-203ENST00000339998 ADCY6O43306 1168 aa16.63■□□□□ 0.25
MBD1-203ENST00000339998 INSRRP14616 1297 aa16.63■□□□□ 0.25
MBD1-203ENST00000339998 SMC1AQ14683 1233 aaKnown RBP16.63■□□□□ 0.25
MBD1-203ENST00000339998 PSMD6Q15008 389 aa16.63■□□□□ 0.25
MBD1-203ENST00000339998 DAB2IPQ5VWQ8 1189 aa16.63■□□□□ 0.25
MBD1-203ENST00000339998 WDR93Q6P2C0 686 aa16.63■□□□□ 0.25
MBD1-203ENST00000339998 MMGT1Q8N4V1 131 aa16.63■□□□□ 0.25
MBD1-203ENST00000339998 GBA2Q9HCG7 927 aaPredicted RBP16.63■□□□□ 0.25
MBD1-203ENST00000339998 STXBP5LQ9Y2K9 1186 aa16.63■□□□□ 0.25
MBD1-203ENST00000339998 ADGRA2Q96PE1 1338 aa16.63■□□□□ 0.25
MBD1-203ENST00000339998 CNTNAP2Q9UHC6 1331 aa16.63■□□□□ 0.25
MBD1-203ENST00000339998 ANKRD62A6NC57 917 aa16.62■□□□□ 0.25
MBD1-203ENST00000339998 LGR5O75473 907 aa16.62■□□□□ 0.25
MBD1-203ENST00000339998 PRKCBP05771 671 aa16.62■□□□□ 0.25
MBD1-203ENST00000339998 CCDC172P0C7W6 258 aa16.62■□□□□ 0.25
MBD1-203ENST00000339998 MESDQ14696 234 aa16.62■□□□□ 0.25
MBD1-203ENST00000339998 CPA5Q8WXQ8 436 aa16.62■□□□□ 0.25
MBD1-203ENST00000339998 RIN2Q8WYP3 895 aaPredicted RBP16.62■□□□□ 0.25
MBD1-203ENST00000339998 DDX1Q92499 740 aaKnown RBP16.62■□□□□ 0.25
MBD1-203ENST00000339998 KRT35Q92764 455 aa16.62■□□□□ 0.25
MBD1-203ENST00000339998 MTMR12Q9C0I1 747 aa16.62■□□□□ 0.25
MBD1-203ENST00000339998 NUB1Q9Y5A7 615 aa16.62■□□□□ 0.25
MBD1-203ENST00000339998 MAP2K7O14733 419 aa16.62■□□□□ 0.25
MBD1-203ENST00000339998 SNAI1O95863 264 aaPredicted RBP16.62■□□□□ 0.25
MBD1-203ENST00000339998 VTNP04004 478 aa16.62■□□□□ 0.25
MBD1-203ENST00000339998 ZNF792Q3KQV3 632 aa16.62■□□□□ 0.25
MBD1-203ENST00000339998 ZNF394Q53GI3 561 aa16.62■□□□□ 0.25
MBD1-203ENST00000339998 C8orf74Q6P047 294 aa16.62■□□□□ 0.25
MBD1-203ENST00000339998 CCNI2Q6ZMN8 369 aaPredicted RBP16.62■□□□□ 0.25
MBD1-203ENST00000339998 SLFN11Q7Z7L1 901 aa16.62■□□□□ 0.25
MBD1-203ENST00000339998 SCFD2Q8WU76 684 aa16.62■□□□□ 0.25
MBD1-203ENST00000339998 ALG3Q92685 438 aa16.62■□□□□ 0.25
MBD1-203ENST00000339998 DDX47Q9H0S4 455 aaKnown RBP16.62■□□□□ 0.25
MBD1-203ENST00000339998 CPA4Q9UI42 421 aa16.62■□□□□ 0.25
MBD1-203ENST00000339998 GRIN3BO60391 1043 aa16.62■□□□□ 0.25
MBD1-203ENST00000339998 ERLIN1O75477 346 aa16.62■□□□□ 0.25
MBD1-203ENST00000339998 OAS2P29728 719 aaKnown RBP16.62■□□□□ 0.25
MBD1-203ENST00000339998 TMEM132AQ24JP5 1023 aa16.62■□□□□ 0.25
MBD1-203ENST00000339998 DPP9Q86TI2 863 aa16.62■□□□□ 0.25
MBD1-203ENST00000339998 USP38Q8NB14 1042 aa16.62■□□□□ 0.25
MBD1-203ENST00000339998 HNRNPLLQ8WVV9 542 aaKnown RBP16.62■□□□□ 0.25
MBD1-203ENST00000339998 RPGRIP1Q96KN7 1286 aa16.62■□□□□ 0.25
MBD1-203ENST00000339998 C1orf112Q9NSG2 853 aa16.62■□□□□ 0.25
MBD1-203ENST00000339998 LGALS2P05162 132 aa16.61■□□□□ 0.25
MBD1-203ENST00000339998 CETPP11597 493 aa16.61■□□□□ 0.25
MBD1-203ENST00000339998 RFX1P22670 979 aa16.61■□□□□ 0.25
MBD1-203ENST00000339998 IFT81Q8WYA0 676 aa16.61■□□□□ 0.25
MBD1-203ENST00000339998 MPHOSPH6Q99547 160 aaKnown RBP16.61■□□□□ 0.25
MBD1-203ENST00000339998 ACO2Q99798 780 aaKnown RBP16.61■□□□□ 0.25
MBD1-203ENST00000339998 CCDC113Q9H0I3 377 aa16.61■□□□□ 0.25
MBD1-203ENST00000339998 ISCUQ9H1K1 167 aa16.61■□□□□ 0.25
MBD1-203ENST00000339998 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.61■□□□□ 0.25
MBD1-203ENST00000339998 PNMA3Q9UL41 463 aa16.61■□□□□ 0.25
MBD1-203ENST00000339998 NOC2LQ9Y3T9 749 aaKnown RBP16.61■□□□□ 0.25
MBD1-203ENST00000339998 ALG6Q9Y672 507 aa16.61■□□□□ 0.25
MBD1-203ENST00000339998 FAM189A1O60320 539 aa16.61■□□□□ 0.25
MBD1-203ENST00000339998 PDE6CP51160 858 aa16.61■□□□□ 0.25
MBD1-203ENST00000339998 IER5Q5VY09 327 aa16.61■□□□□ 0.25
MBD1-203ENST00000339998 TMEM270Q6UE05 265 aa16.61■□□□□ 0.25
MBD1-203ENST00000339998 GPR142Q7Z601 462 aa16.61■□□□□ 0.25
MBD1-203ENST00000339998 TSKSQ9UJT2 592 aa16.61■□□□□ 0.25
MBD1-203ENST00000339998 AMFRQ9UKV5 643 aa16.61■□□□□ 0.25
MBD1-203ENST00000339998 ZHX1Q9UKY1 873 aaPredicted RBP16.61■□□□□ 0.25
MBD1-203ENST00000339998 GINS2Q9Y248 185 aa16.61■□□□□ 0.25
MBD1-203ENST00000339998 IVNS1ABPQ9Y6Y0 642 aa16.61■□□□□ 0.25
MBD1-203ENST00000339998 NCANO14594 1321 aa16.6■□□□□ 0.25
MBD1-203ENST00000339998 H0YCG3 227 aa16.6■□□□□ 0.25
MBD1-203ENST00000339998 PMM2O15305 246 aa16.6■□□□□ 0.25
MBD1-203ENST00000339998 RAD51CO43502 376 aa16.6■□□□□ 0.25
MBD1-203ENST00000339998 CD58P19256 250 aa16.6■□□□□ 0.25
MBD1-203ENST00000339998 FGFR4P22455 802 aa16.6■□□□□ 0.25
MBD1-203ENST00000339998 CARSP49589 748 aaKnown RBP16.6■□□□□ 0.25
MBD1-203ENST00000339998 FAM193AP78312 1265 aa16.6■□□□□ 0.25
MBD1-203ENST00000339998 GUCY2DQ02846 1103 aa16.6■□□□□ 0.25
MBD1-203ENST00000339998 TMEM62Q0P6H9 643 aa16.6■□□□□ 0.25
MBD1-203ENST00000339998 ILDR2Q71H61 639 aa16.6■□□□□ 0.25
MBD1-203ENST00000339998 ZNF572Q7Z3I7 529 aaPredicted RBP16.6■□□□□ 0.25
MBD1-203ENST00000339998 CPB2Q96IY4 423 aa16.6■□□□□ 0.25
MBD1-203ENST00000339998 SMARCAD1Q9H4L7 1026 aa16.6■□□□□ 0.25
MBD1-203ENST00000339998 IGKV6-21A0A0C4DH24 114 aa16.6■□□□□ 0.25
MBD1-203ENST00000339998 GJB6O95452 261 aa16.6■□□□□ 0.25
MBD1-203ENST00000339998 PIGRP01833 764 aa16.6■□□□□ 0.25
MBD1-203ENST00000339998 ANXA13P27216 316 aa16.6■□□□□ 0.25
MBD1-203ENST00000339998 MAPK6Q16659 721 aa16.6■□□□□ 0.25
MBD1-203ENST00000339998 PLPPR4Q7Z2D5 763 aa16.6■□□□□ 0.25
MBD1-203ENST00000339998 HDXQ7Z353 690 aa16.6■□□□□ 0.25
MBD1-203ENST00000339998 DDX42Q86XP3 938 aaKnown RBP eCLIP16.6■□□□□ 0.25
MBD1-203ENST00000339998 NPLOC4Q8TAT6 608 aa16.6■□□□□ 0.25
MBD1-203ENST00000339998 ZNF653Q96CK0 615 aa16.6■□□□□ 0.25
MBD1-203ENST00000339998 MAF1Q9H063 256 aa16.6■□□□□ 0.25
MBD1-203ENST00000339998 EPB41L5Q9HCM4 733 aa16.6■□□□□ 0.25
MBD1-203ENST00000339998 RNF19AQ9NV58 838 aa16.6■□□□□ 0.25
MBD1-203ENST00000339998 INTUQ9ULD6 942 aa16.6■□□□□ 0.25
MBD1-203ENST00000339998 MGAMO43451 1857 aa16.6■□□□□ 0.25
MBD1-203ENST00000339998 PLXNA1Q9UIW2 1896 aa16.6■□□□□ 0.25
MBD1-203ENST00000339998 A0A087WZ62 844 aa16.59■□□□□ 0.25
MBD1-203ENST00000339998 A0A0A6YYK5 440 aaPredicted RBP16.59■□□□□ 0.25
MBD1-203ENST00000339998 ASB14A6NK59 587 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms