RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 TTC7BQ86TV6 843 aa10.25□□□□□ -0.77
PTCHD4-201ENST00000339488 TBC1D10CQ8IV04 446 aa10.25□□□□□ -0.77
PTCHD4-201ENST00000339488 SLC38A6Q8IZM9 456 aa10.25□□□□□ -0.77
PTCHD4-201ENST00000339488 BAP1Q92560 729 aa10.25□□□□□ -0.77
PTCHD4-201ENST00000339488 GPATCH1Q9BRR8 931 aaKnown RBP10.25□□□□□ -0.77
PTCHD4-201ENST00000339488 DCUN1D5Q9BTE7 237 aa10.25□□□□□ -0.77
PTCHD4-201ENST00000339488 RBM38Q9H0Z9 239 aaKnown RBP10.25□□□□□ -0.77
PTCHD4-201ENST00000339488 EHD1Q9H4M9 534 aa10.25□□□□□ -0.77
PTCHD4-201ENST00000339488 ARMCX1Q9P291 453 aa10.25□□□□□ -0.77
PTCHD4-201ENST00000339488 ITGB1BP2Q9UKP3 347 aa10.25□□□□□ -0.77
PTCHD4-201ENST00000339488 ANGPTL2Q9UKU9 493 aa10.25□□□□□ -0.77
PTCHD4-201ENST00000339488 NALCNQ8IZF0 1738 aa10.25□□□□□ -0.77
PTCHD4-201ENST00000339488 NWD1Q149M9 1564 aa10.25□□□□□ -0.77
PTCHD4-201ENST00000339488 FAM47E-STBD1D6RA91 191 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 CYP26A1O43174 497 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 GTPBP6O43824 516 aaPredicted RBP10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 MGEA5O60502 916 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 GUCY1B2O75343 617 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 WDR4P57081 412 aaKnown RBP10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 TIMM10P62072 90 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 PLCB3Q01970 1234 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 TCIRG1Q13488 830 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 ACVR2BQ13705 512 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 PLEKHG4Q58EX7 1191 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 SLC27A3Q5K4L6 730 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 RIPOR1Q6ZS17 1223 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 CLNKQ7Z7G1 428 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 IL17REQ8NFR9 667 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 GABPB2Q8TAK5 448 aaPredicted RBP10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 C10orf82Q8WW14 230 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 IRGQQ8WZA9 623 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 C18orf8Q96DM3 657 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 COX4I2Q96KJ9 171 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 GCNAQ96QF7 691 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 BTBD10Q9BSF8 475 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 TANGO6Q9C0B7 1094 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 SENP6Q9GZR1 1112 aaPredicted RBP10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 AIPL1Q9NZN9 384 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 ARMCX3Q9UH62 379 aaPredicted RBP10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 SERPINA10Q9UK55 444 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 PTPN22Q9Y2R2 807 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 USP31Q70CQ4 1352 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 SOS2Q07890 1332 aaPredicted RBP10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 CBFA2T3O75081 653 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 PABPC1P11940 636 aaKnown RBP10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 BDNFP23560 247 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 RPL21P46778 160 aaKnown RBP10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 CCT8P50990 548 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 VCPP55072 806 aaKnown RBP10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 IFIT5Q13325 482 aaKnown RBP10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 MOGSQ13724 837 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 KYNUQ16719 465 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 TMTC4Q5T4D3 741 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 ITPRIPL1Q6GPH6 555 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 NLRX1Q86UT6 975 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 FAM20CQ8IXL6 584 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 CRACR2BQ8N4Y2 399 aaPredicted RBP10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 EIF1ADQ8N9N8 165 aaKnown RBP10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 PLEKHO2Q8TD55 490 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 BHMTQ93088 406 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 TMIGD2Q96BF3 282 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 MRRFQ96E11 262 aaKnown RBP10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 MAGEB18Q96M61 343 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 PWWP2AQ96N64 755 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 TMOD2Q9NZR1 351 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 POU2F3Q9UKI9 436 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 GRID1Q9ULK0 1009 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 SIK3Q9Y2K2 1263 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 ECM29Q5VYK3 1845 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 A0A0G2JND7 137 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 PRAMEF22A3QJZ6 481 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 TNFRSF10AO00220 468 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 PSMA7O14818 248 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 PLSCR1O15162 318 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 PRPF3O43395 683 aaKnown RBP10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 ESRRAP11474 423 aaPredicted RBP10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 FCER1AP12319 257 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 VCLP18206 1134 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 CRABP2P29373 138 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 PGM1P36871 562 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 CHN2P52757 468 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 SLC5A3P53794 718 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 FKBP4Q02790 459 aaKnown RBP eCLIP10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 RAPGEF1Q13905 1077 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 ARL13BQ3SXY8 428 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 WDR45BQ5MNZ6 344 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 DTX3Q8N9I9 347 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 DDHD1Q8NEL9 900 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 RFWD2Q8NHY2 731 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 PANX3Q96QZ0 392 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 TLE6Q9H808 572 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 HACD3Q9P035 362 aa10.24□□□□□ -0.77
PTCHD4-201ENST00000339488 GOLGA8TH3BQL2 631 aa10.23□□□□□ -0.77
PTCHD4-201ENST00000339488 GRM8O00222 908 aa10.23□□□□□ -0.77
PTCHD4-201ENST00000339488 TRPA1O75762 1119 aa10.23□□□□□ -0.77
PTCHD4-201ENST00000339488 DCTN3O75935 186 aa10.23□□□□□ -0.77
PTCHD4-201ENST00000339488 EYA4O95677 639 aa10.23□□□□□ -0.77
PTCHD4-201ENST00000339488 GAS8O95995 478 aa10.23□□□□□ -0.77
PTCHD4-201ENST00000339488 GOLGA8HP0CJ92 632 aa10.23□□□□□ -0.77
PTCHD4-201ENST00000339488 FGFR1P11362 822 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms