RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 SEMA4DQ92854 862 aa15.9■□□□□ 0.14
CBX3-201ENST00000337620 CGRRF1Q99675 332 aa15.9■□□□□ 0.14
CBX3-201ENST00000337620 RPF1Q9H9Y2 349 aaKnown RBP15.9■□□□□ 0.14
CBX3-201ENST00000337620 DNAJC12Q9UKB3 198 aa15.9■□□□□ 0.14
CBX3-201ENST00000337620 CDY2AQ9Y6F7 541 aa15.9■□□□□ 0.14
CBX3-201ENST00000337620 USP27XA6NNY8 438 aa15.89■□□□□ 0.13
CBX3-201ENST00000337620 MTFR1Q15390 333 aa15.89■□□□□ 0.13
CBX3-201ENST00000337620 CCAR2Q8N163 923 aaKnown RBP15.89■□□□□ 0.13
CBX3-201ENST00000337620 DESI2Q9BSY9 194 aa15.89■□□□□ 0.13
CBX3-201ENST00000337620 UBE2TQ9NPD8 197 aaPredicted RBP15.89■□□□□ 0.13
CBX3-201ENST00000337620 TRMT13Q9NUP7 481 aaKnown RBP15.89■□□□□ 0.13
CBX3-201ENST00000337620 RAB20Q9NX57 234 aa15.89■□□□□ 0.13
CBX3-201ENST00000337620 COQ4Q9Y3A0 265 aa15.89■□□□□ 0.13
CBX3-201ENST00000337620 A0A1W2PQ45 241 aaPredicted RBP15.89■□□□□ 0.13
CBX3-201ENST00000337620 A0A1W2PQY0 241 aa15.89■□□□□ 0.13
CBX3-201ENST00000337620 NPTXRO95502 500 aa15.89■□□□□ 0.13
CBX3-201ENST00000337620 C4BPAP04003 597 aaKnown RBP15.89■□□□□ 0.13
CBX3-201ENST00000337620 CLTAP09496 248 aa15.89■□□□□ 0.13
CBX3-201ENST00000337620 CXCL8P10145 99 aa15.89■□□□□ 0.13
CBX3-201ENST00000337620 THPOP40225 353 aa15.89■□□□□ 0.13
CBX3-201ENST00000337620 SURF1Q15526 300 aa15.89■□□□□ 0.13
CBX3-201ENST00000337620 TDRD10Q5VZ19 366 aaKnown RBP15.89■□□□□ 0.13
CBX3-201ENST00000337620 NOTUMQ6P988 496 aa15.89■□□□□ 0.13
CBX3-201ENST00000337620 C15orf39Q6ZRI6 1047 aa15.89■□□□□ 0.13
CBX3-201ENST00000337620 OR5B17Q8NGF7 314 aa15.89■□□□□ 0.13
CBX3-201ENST00000337620 NHEJ1Q9H9Q4 299 aaPredicted RBP15.89■□□□□ 0.13
CBX3-201ENST00000337620 STARD7Q9NQZ5 370 aa15.89■□□□□ 0.13
CBX3-201ENST00000337620 PIN4Q9Y237 131 aaKnown RBP15.89■□□□□ 0.13
CBX3-201ENST00000337620 TRPV2Q9Y5S1 764 aa15.89■□□□□ 0.13
CBX3-201ENST00000337620 KBTBD13C9JR72 458 aa15.88■□□□□ 0.13
CBX3-201ENST00000337620 PLEKP08567 350 aaPredicted RBP15.88■□□□□ 0.13
CBX3-201ENST00000337620 ARHGAP44Q17R89 818 aa15.88■□□□□ 0.13
CBX3-201ENST00000337620 ZACNQ401N2 412 aa15.88■□□□□ 0.13
CBX3-201ENST00000337620 SLC27A1Q6PCB7 646 aa15.88■□□□□ 0.13
CBX3-201ENST00000337620 WDR49Q8IV35 697 aa15.88■□□□□ 0.13
CBX3-201ENST00000337620 ARHGEF19Q8IW93 802 aa15.88■□□□□ 0.13
CBX3-201ENST00000337620 DNAJC5GQ8N7S2 189 aa15.88■□□□□ 0.13
CBX3-201ENST00000337620 SYN2Q92777 582 aaPredicted RBP15.88■□□□□ 0.13
CBX3-201ENST00000337620 DEFB118Q96PH6 123 aa15.88■□□□□ 0.13
CBX3-201ENST00000337620 PHACTR2O75167 634 aa15.88■□□□□ 0.13
CBX3-201ENST00000337620 CDK17Q00537 523 aa15.88■□□□□ 0.13
CBX3-201ENST00000337620 ASIC2Q16515 512 aa15.88■□□□□ 0.13
CBX3-201ENST00000337620 KYAT1Q16773 422 aa15.88■□□□□ 0.13
CBX3-201ENST00000337620 DCAF4L1Q3SXM0 396 aa15.88■□□□□ 0.13
CBX3-201ENST00000337620 APBB1IPQ7Z5R6 666 aaPredicted RBP15.88■□□□□ 0.13
CBX3-201ENST00000337620 ELMO3Q96BJ8 720 aa15.88■□□□□ 0.13
CBX3-201ENST00000337620 CCDC42Q96M95 316 aa15.88■□□□□ 0.13
CBX3-201ENST00000337620 PI4K2AQ9BTU6 479 aa15.88■□□□□ 0.13
CBX3-201ENST00000337620 STK33Q9BYT3 514 aa15.88■□□□□ 0.13
CBX3-201ENST00000337620 RNF208Q9H0X6 261 aa15.88■□□□□ 0.13
CBX3-201ENST00000337620 SPTLC3Q9NUV7 552 aa15.88■□□□□ 0.13
CBX3-201ENST00000337620 ARHGAP20Q9P2F6 1191 aa15.88■□□□□ 0.13
CBX3-201ENST00000337620 PPP2R2CQ9Y2T4 447 aa15.88■□□□□ 0.13
CBX3-201ENST00000337620 NOC2LQ9Y3T9 749 aaKnown RBP15.88■□□□□ 0.13
CBX3-201ENST00000337620 EPN1Q9Y6I3 576 aaPredicted RBP15.88■□□□□ 0.13
CBX3-201ENST00000337620 IL18RAPO95256 599 aa15.87■□□□□ 0.13
CBX3-201ENST00000337620 HLA-DRAP01903 254 aa15.87■□□□□ 0.13
CBX3-201ENST00000337620 CHRNA1P02708 482 aa15.87■□□□□ 0.13
CBX3-201ENST00000337620 PNMA6AP0CW24 399 aaPredicted RBP15.87■□□□□ 0.13
CBX3-201ENST00000337620 AXLP30530 894 aa15.87■□□□□ 0.13
CBX3-201ENST00000337620 PIK3CAP42336 1068 aa15.87■□□□□ 0.13
CBX3-201ENST00000337620 JAM2P57087 298 aa15.87■□□□□ 0.13
CBX3-201ENST00000337620 TFAMQ00059 246 aaKnown RBP15.87■□□□□ 0.13
CBX3-201ENST00000337620 PTPN11Q06124 597 aaPredicted RBP15.87■□□□□ 0.13
CBX3-201ENST00000337620 DRAP1Q14919 205 aaPredicted RBP15.87■□□□□ 0.13
CBX3-201ENST00000337620 DUOXA2Q1HG44 320 aa15.87■□□□□ 0.13
CBX3-201ENST00000337620 TDRD12Q587J7 1177 aaKnown RBP15.87■□□□□ 0.13
CBX3-201ENST00000337620 PPM1KQ8N3J5 372 aa15.87■□□□□ 0.13
CBX3-201ENST00000337620 ACAP3Q96P50 834 aa15.87■□□□□ 0.13
CBX3-201ENST00000337620 EIF2AQ9BY44 585 aaKnown RBP15.87■□□□□ 0.13
CBX3-201ENST00000337620 TRIM6Q9C030 488 aaPredicted RBP15.87■□□□□ 0.13
CBX3-201ENST00000337620 DEF6Q9H4E7 631 aa15.87■□□□□ 0.13
CBX3-201ENST00000337620 AIPL1Q9NZN9 384 aa15.87■□□□□ 0.13
CBX3-201ENST00000337620 MYO6Q9UM54 1294 aa15.87■□□□□ 0.13
CBX3-201ENST00000337620 LACTBL1A8MY62 500 aa15.86■□□□□ 0.13
CBX3-201ENST00000337620 ZSCAN12O43309 604 aa15.86■□□□□ 0.13
CBX3-201ENST00000337620 CLSTN1O94985 981 aa15.86■□□□□ 0.13
CBX3-201ENST00000337620 NDUFA10O95299 355 aa15.86■□□□□ 0.13
CBX3-201ENST00000337620 SERPING1P05155 500 aa15.86■□□□□ 0.13
CBX3-201ENST00000337620 RPLP2P05387 115 aaKnown RBP15.86■□□□□ 0.13
CBX3-201ENST00000337620 CCL5P13501 91 aa15.86■□□□□ 0.13
CBX3-201ENST00000337620 RFX1P22670 979 aa15.86■□□□□ 0.13
CBX3-201ENST00000337620 EIF4A3P38919 411 aaKnown RBP15.86■□□□□ 0.13
CBX3-201ENST00000337620 STAT1P42224 750 aa15.86■□□□□ 0.13
CBX3-201ENST00000337620 AP3M2P53677 418 aa15.86■□□□□ 0.13
CBX3-201ENST00000337620 PTK7Q13308 1070 aa15.86■□□□□ 0.13
CBX3-201ENST00000337620 RPAINQ86UA6 219 aa15.86■□□□□ 0.13
CBX3-201ENST00000337620 FAM228AQ86W67 206 aa15.86■□□□□ 0.13
CBX3-201ENST00000337620 NT5C1BQ96P26 610 aa15.86■□□□□ 0.13
CBX3-201ENST00000337620 MTMR12Q9C0I1 747 aa15.86■□□□□ 0.13
CBX3-201ENST00000337620 PAK6Q9NQU5 681 aaPredicted RBP15.86■□□□□ 0.13
CBX3-201ENST00000337620 ADGRG1Q9Y653 693 aa15.86■□□□□ 0.13
CBX3-201ENST00000337620 CCP110O43303 1012 aa15.86■□□□□ 0.13
CBX3-201ENST00000337620 RPS6KA5O75582 802 aa15.86■□□□□ 0.13
CBX3-201ENST00000337620 VNN1O95497 513 aa15.86■□□□□ 0.13
CBX3-201ENST00000337620 CCDC175P0C221 793 aa15.86■□□□□ 0.13
CBX3-201ENST00000337620 TMEM191BP0C7N4 346 aa15.86■□□□□ 0.13
CBX3-201ENST00000337620 CYLC1P35663 651 aaPredicted RBP15.86■□□□□ 0.13
CBX3-201ENST00000337620 KLHL30Q0D2K2 578 aa15.86■□□□□ 0.13
CBX3-201ENST00000337620 WDR44Q5JSH3 913 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms