RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 GNPTABQ3T906 1256 aa9.5□□□□□ -0.89
SNCA-201ENST00000336904 MIS18BP1Q6P0N0 1132 aa9.5□□□□□ -0.89
SNCA-201ENST00000336904 DPH6Q7L8W6 267 aa9.5□□□□□ -0.89
SNCA-201ENST00000336904 THNSL1Q8IYQ7 743 aa9.5□□□□□ -0.89
SNCA-201ENST00000336904 SYCE1Q8N0S2 351 aa9.5□□□□□ -0.89
SNCA-201ENST00000336904 TAB3Q8N5C8 712 aaPredicted RBP9.5□□□□□ -0.89
SNCA-201ENST00000336904 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.5□□□□□ -0.89
SNCA-201ENST00000336904 SHC3Q92529 594 aa9.5□□□□□ -0.89
SNCA-201ENST00000336904 MSTO1Q9BUK6 570 aa9.5□□□□□ -0.89
SNCA-201ENST00000336904 TMEM8AQ9HCN3 771 aa9.5□□□□□ -0.89
SNCA-201ENST00000336904 RBAKQ9NYW8 714 aaPredicted RBP9.5□□□□□ -0.89
SNCA-201ENST00000336904 ZNF112Q9UJU3 913 aa9.5□□□□□ -0.89
SNCA-201ENST00000336904 EXOC7Q9UPT5 735 aa9.5□□□□□ -0.89
SNCA-201ENST00000336904 NCANO14594 1321 aa9.5□□□□□ -0.89
SNCA-201ENST00000336904 DOCK1Q14185 1865 aa9.5□□□□□ -0.89
SNCA-201ENST00000336904 SPATA31C2B4DYI2 1134 aa9.5□□□□□ -0.89
SNCA-201ENST00000336904 B4GALT5O43286 388 aa9.5□□□□□ -0.89
SNCA-201ENST00000336904 OATP04181 439 aa9.5□□□□□ -0.89
SNCA-201ENST00000336904 TCF4P15884 667 aa9.5□□□□□ -0.89
SNCA-201ENST00000336904 FGFR4P22455 802 aa9.5□□□□□ -0.89
SNCA-201ENST00000336904 ALDH5A1P51649 535 aaPredicted RBP9.5□□□□□ -0.89
SNCA-201ENST00000336904 STRN3Q13033 797 aa9.5□□□□□ -0.89
SNCA-201ENST00000336904 MTM1Q13496 603 aa9.5□□□□□ -0.89
SNCA-201ENST00000336904 APOBEC3FQ8IUX4 373 aaKnown RBP9.5□□□□□ -0.89
SNCA-201ENST00000336904 SPIRE2Q8WWL2 714 aa9.5□□□□□ -0.89
SNCA-201ENST00000336904 KIFAP3Q92845 792 aa9.5□□□□□ -0.89
SNCA-201ENST00000336904 MAGOHBQ96A72 148 aaKnown RBP9.5□□□□□ -0.89
SNCA-201ENST00000336904 C1orf112Q9NSG2 853 aa9.5□□□□□ -0.89
SNCA-201ENST00000336904 RNF181Q9P0P0 153 aa9.5□□□□□ -0.89
SNCA-201ENST00000336904 GSTTP1A0A1W2PQM5 241 aa9.49□□□□□ -0.89
SNCA-201ENST00000336904 BTNL10A8MVZ5 291 aa9.49□□□□□ -0.89
SNCA-201ENST00000336904 PI4K2BG5E9Z4 385 aa9.49□□□□□ -0.89
SNCA-201ENST00000336904 VNN1O95497 513 aa9.49□□□□□ -0.89
SNCA-201ENST00000336904 CST3P01034 146 aaPredicted RBP9.49□□□□□ -0.89
SNCA-201ENST00000336904 CYP2C8P10632 490 aa9.49□□□□□ -0.89
SNCA-201ENST00000336904 IRX3P78415 501 aaPredicted RBP9.49□□□□□ -0.89
SNCA-201ENST00000336904 CAPSQ13938 189 aa9.49□□□□□ -0.89
SNCA-201ENST00000336904 ATP13A4Q4VNC1 1196 aa9.49□□□□□ -0.89
SNCA-201ENST00000336904 CRELD2Q6UXH1 353 aaPredicted RBP9.49□□□□□ -0.89
SNCA-201ENST00000336904 FBXO25Q8TCJ0 367 aa9.49□□□□□ -0.89
SNCA-201ENST00000336904 PRPF31Q8WWY3 499 aaKnown RBP9.49□□□□□ -0.89
SNCA-201ENST00000336904 SLC7A3Q8WY07 619 aa9.49□□□□□ -0.89
SNCA-201ENST00000336904 CAVIN3Q969G5 261 aa9.49□□□□□ -0.89
SNCA-201ENST00000336904 CAPS2Q9BXY5 557 aa9.49□□□□□ -0.89
SNCA-201ENST00000336904 MTMR12Q9C0I1 747 aa9.49□□□□□ -0.89
SNCA-201ENST00000336904 PCDHB4Q9Y5E5 795 aa9.49□□□□□ -0.89
SNCA-201ENST00000336904 PIK3R2O00459 728 aa9.49□□□□□ -0.89
SNCA-201ENST00000336904 RTN2O75298 545 aa9.49□□□□□ -0.89
SNCA-201ENST00000336904 WEE2P0C1S8 567 aa9.49□□□□□ -0.89
SNCA-201ENST00000336904 CCDC172P0C7W6 258 aa9.49□□□□□ -0.89
SNCA-201ENST00000336904 IRAK1P51617 712 aa9.49□□□□□ -0.89
SNCA-201ENST00000336904 EAPPQ56P03 285 aaPredicted RBP9.49□□□□□ -0.89
SNCA-201ENST00000336904 RHPN2Q8IUC4 686 aa9.49□□□□□ -0.89
SNCA-201ENST00000336904 CCDC50Q8IVM0 306 aa9.49□□□□□ -0.89
SNCA-201ENST00000336904 TMEM192Q8IY95 271 aa9.49□□□□□ -0.89
SNCA-201ENST00000336904 IQCKQ8N0W5 287 aa9.49□□□□□ -0.89
SNCA-201ENST00000336904 PRELID2Q8N945 189 aa9.49□□□□□ -0.89
SNCA-201ENST00000336904 ATP8B4Q8TF62 1192 aa9.49□□□□□ -0.89
SNCA-201ENST00000336904 ZSWIM1Q9BR11 485 aa9.49□□□□□ -0.89
SNCA-201ENST00000336904 ISCUQ9H1K1 167 aa9.49□□□□□ -0.89
SNCA-201ENST00000336904 HOXC10Q9NYD6 342 aa9.49□□□□□ -0.89
SNCA-201ENST00000336904 NUB1Q9Y5A7 615 aa9.49□□□□□ -0.89
SNCA-201ENST00000336904 PARP14Q460N5 1801 aa9.49□□□□□ -0.89
SNCA-201ENST00000336904 A0A0A6YYK5 440 aaPredicted RBP9.48□□□□□ -0.89
SNCA-201ENST00000336904 RAP1GAPP47736 663 aa9.48□□□□□ -0.89
SNCA-201ENST00000336904 CLCN3P51790 818 aa9.48□□□□□ -0.89
SNCA-201ENST00000336904 ADCY1Q08828 1119 aa9.48□□□□□ -0.89
SNCA-201ENST00000336904 ODF2Q5BJF6 829 aa9.48□□□□□ -0.89
SNCA-201ENST00000336904 XKR3Q5GH77 459 aa9.48□□□□□ -0.89
SNCA-201ENST00000336904 HP1BP3Q5SSJ5 553 aaPredicted RBP9.48□□□□□ -0.89
SNCA-201ENST00000336904 JAMLQ86YT9 394 aa9.48□□□□□ -0.89
SNCA-201ENST00000336904 CCDC105Q8IYK2 499 aa9.48□□□□□ -0.89
SNCA-201ENST00000336904 RNF149Q8NC42 400 aa9.48□□□□□ -0.89
SNCA-201ENST00000336904 BCAS4Q8TDM0 211 aa9.48□□□□□ -0.89
SNCA-201ENST00000336904 DDX1Q92499 740 aaKnown RBP9.48□□□□□ -0.89
SNCA-201ENST00000336904 HAUS1Q96CS2 278 aa9.48□□□□□ -0.89
SNCA-201ENST00000336904 ADAM33Q9BZ11 813 aa9.48□□□□□ -0.89
SNCA-201ENST00000336904 VPS33BQ9H267 617 aa9.48□□□□□ -0.89
SNCA-201ENST00000336904 ARHGAP28Q9P2N2 729 aa9.48□□□□□ -0.89
SNCA-201ENST00000336904 RNF14Q9UBS8 474 aa9.48□□□□□ -0.89
SNCA-201ENST00000336904 GINS2Q9Y248 185 aa9.48□□□□□ -0.89
SNCA-201ENST00000336904 UTP11Q9Y3A2 253 aaKnown RBP9.48□□□□□ -0.89
SNCA-201ENST00000336904 CSADQ9Y600 493 aa9.48□□□□□ -0.89
SNCA-201ENST00000336904 LCTP09848 1927 aa9.48□□□□□ -0.89
SNCA-201ENST00000336904 GRIN3BO60391 1043 aa9.48□□□□□ -0.89
SNCA-201ENST00000336904 FARP2O94887 1054 aaPredicted RBP9.48□□□□□ -0.89
SNCA-201ENST00000336904 STAT5BP51692 787 aa9.48□□□□□ -0.89
SNCA-201ENST00000336904 TFAMQ00059 246 aaKnown RBP9.48□□□□□ -0.89
SNCA-201ENST00000336904 CDR2Q01850 454 aa9.48□□□□□ -0.89
SNCA-201ENST00000336904 GHRHRQ02643 423 aa9.48□□□□□ -0.89
SNCA-201ENST00000336904 CCDC38Q502W7 563 aa9.48□□□□□ -0.89
SNCA-201ENST00000336904 GLE1Q53GS7 698 aaKnown RBP9.48□□□□□ -0.89
SNCA-201ENST00000336904 KAZNQ674X7 775 aa9.48□□□□□ -0.89
SNCA-201ENST00000336904 MMS22LQ6ZRQ5 1243 aa9.48□□□□□ -0.89
SNCA-201ENST00000336904 B4GALNT4Q76KP1 1039 aa9.48□□□□□ -0.89
SNCA-201ENST00000336904 SULF1Q8IWU6 871 aa9.48□□□□□ -0.89
SNCA-201ENST00000336904 RASGEF1CQ8N431 466 aa9.48□□□□□ -0.89
SNCA-201ENST00000336904 MCPH1Q8NEM0 835 aa9.48□□□□□ -0.89
SNCA-201ENST00000336904 MDM1Q8TC05 714 aa9.48□□□□□ -0.89
SNCA-201ENST00000336904 MFSD14AQ96MC6 490 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms