RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 CLDN3O15551 220 aa13.53□□□□□ -0.24
LIMK1-201ENST00000336180 VNN1O95497 513 aa13.53□□□□□ -0.24
LIMK1-201ENST00000336180 OSBPP22059 807 aa13.53□□□□□ -0.24
LIMK1-201ENST00000336180 ARL2P36404 184 aa13.53□□□□□ -0.24
LIMK1-201ENST00000336180 MFAP3P55082 362 aa13.53□□□□□ -0.24
LIMK1-201ENST00000336180 PLCB4Q15147 1175 aa13.53□□□□□ -0.24
LIMK1-201ENST00000336180 BRDTQ58F21 947 aaPredicted RBP13.53□□□□□ -0.24
LIMK1-201ENST00000336180 TRIM51Q9BSJ1 452 aa13.53□□□□□ -0.24
LIMK1-201ENST00000336180 FAM53CQ9NYF3 392 aa13.53□□□□□ -0.24
LIMK1-201ENST00000336180 SUCLA2Q9P2R7 463 aaPredicted RBP13.53□□□□□ -0.24
LIMK1-201ENST00000336180 TCRBV7S2A1N4TA0A589 114 aa13.52□□□□□ -0.24
LIMK1-201ENST00000336180 KRT19P08727 400 aa13.52□□□□□ -0.24
LIMK1-201ENST00000336180 WEE2P0C1S8 567 aa13.52□□□□□ -0.24
LIMK1-201ENST00000336180 IQCF3P0C7M6 154 aa13.52□□□□□ -0.24
LIMK1-201ENST00000336180 PPIL2Q13356 520 aa13.52□□□□□ -0.24
LIMK1-201ENST00000336180 KIF22Q14807 665 aa13.52□□□□□ -0.24
LIMK1-201ENST00000336180 CELF3Q5SZQ8 465 aaKnown RBP13.52□□□□□ -0.24
LIMK1-201ENST00000336180 TTC19Q6DKK2 380 aaPredicted RBP13.52□□□□□ -0.24
LIMK1-201ENST00000336180 EFCAB12Q6NXP0 572 aa13.52□□□□□ -0.24
LIMK1-201ENST00000336180 RNF217Q8TC41 542 aa13.52□□□□□ -0.24
LIMK1-201ENST00000336180 RFFLQ8WZ73 363 aa13.52□□□□□ -0.24
LIMK1-201ENST00000336180 MFSD14AQ96MC6 490 aa13.52□□□□□ -0.24
LIMK1-201ENST00000336180 SCLT1Q96NL6 688 aa13.52□□□□□ -0.24
LIMK1-201ENST00000336180 CEP89Q96ST8 783 aa13.52□□□□□ -0.24
LIMK1-201ENST00000336180 ST6GALNAC4Q9H4F1 302 aa13.52□□□□□ -0.24
LIMK1-201ENST00000336180 RRAGCQ9HB90 399 aa13.52□□□□□ -0.24
LIMK1-201ENST00000336180 ERVK-5Q9HDB9 667 aa13.52□□□□□ -0.24
LIMK1-201ENST00000336180 KLHL11Q9NVR0 708 aa13.52□□□□□ -0.24
LIMK1-201ENST00000336180 NOCTQ9UK39 431 aaKnown RBP13.52□□□□□ -0.24
LIMK1-201ENST00000336180 AMFRQ9UKV5 643 aa13.52□□□□□ -0.24
LIMK1-201ENST00000336180 NUB1Q9Y5A7 615 aa13.52□□□□□ -0.24
LIMK1-201ENST00000336180 PCDHB4Q9Y5E5 795 aa13.52□□□□□ -0.24
LIMK1-201ENST00000336180 OTOFQ9HC10 1997 aa13.52□□□□□ -0.24
LIMK1-201ENST00000336180 O00370 1275 aa13.52□□□□□ -0.24
LIMK1-201ENST00000336180 CXCL11O14625 94 aa13.52□□□□□ -0.24
LIMK1-201ENST00000336180 DKC1O60832 514 aaKnown RBP eCLIP13.52□□□□□ -0.24
LIMK1-201ENST00000336180 ATG7O95352 703 aa13.52□□□□□ -0.24
LIMK1-201ENST00000336180 EDNRBP24530 442 aa13.52□□□□□ -0.24
LIMK1-201ENST00000336180 ICAM3P32942 547 aa13.52□□□□□ -0.24
LIMK1-201ENST00000336180 SSR1P43307 286 aaKnown RBP13.52□□□□□ -0.24
LIMK1-201ENST00000336180 RAP1GAPP47736 663 aa13.52□□□□□ -0.24
LIMK1-201ENST00000336180 C1orf112Q9NSG2 853 aa13.52□□□□□ -0.24
LIMK1-201ENST00000336180 NXF1Q9UBU9 619 aaKnown RBP13.52□□□□□ -0.24
LIMK1-201ENST00000336180 CPA4Q9UI42 421 aa13.52□□□□□ -0.24
LIMK1-201ENST00000336180 NENFQ9UMX5 172 aa13.52□□□□□ -0.24
LIMK1-201ENST00000336180 ALG6Q9Y672 507 aa13.52□□□□□ -0.24
LIMK1-201ENST00000336180 GLTPD2A6NH11 291 aa13.52□□□□□ -0.25
LIMK1-201ENST00000336180 ZBTB42B2RXF5 422 aa13.52□□□□□ -0.25
LIMK1-201ENST00000336180 EXTL3O43909 919 aa13.52□□□□□ -0.25
LIMK1-201ENST00000336180 PDE6CP51160 858 aa13.52□□□□□ -0.25
LIMK1-201ENST00000336180 SNAPC2Q13487 334 aa13.52□□□□□ -0.25
LIMK1-201ENST00000336180 FAM160B1Q5W0V3 765 aa13.52□□□□□ -0.25
LIMK1-201ENST00000336180 C12orf56Q8IXR9 622 aa13.52□□□□□ -0.25
LIMK1-201ENST00000336180 FAM71AQ8IYT1 594 aa13.52□□□□□ -0.25
LIMK1-201ENST00000336180 USP38Q8NB14 1042 aa13.52□□□□□ -0.25
LIMK1-201ENST00000336180 CASKIN2Q8WXE0 1202 aa13.52□□□□□ -0.25
LIMK1-201ENST00000336180 PSPC1Q8WXF1 523 aaKnown RBP13.52□□□□□ -0.25
LIMK1-201ENST00000336180 BRI3BPQ8WY22 251 aa13.52□□□□□ -0.25
LIMK1-201ENST00000336180 CYFIP2Q96F07 1278 aa13.52□□□□□ -0.25
LIMK1-201ENST00000336180 NUP85Q9BW27 656 aa13.52□□□□□ -0.25
LIMK1-201ENST00000336180 STIM2Q9P246 746 aa13.52□□□□□ -0.25
LIMK1-201ENST00000336180 FBXL5Q9UKA1 691 aa13.52□□□□□ -0.25
LIMK1-201ENST00000336180 USTQ9Y2C2 406 aa13.52□□□□□ -0.25
LIMK1-201ENST00000336180 CELF2O95319 508 aaKnown RBP13.51□□□□□ -0.25
LIMK1-201ENST00000336180 COMTP21964 271 aa13.51□□□□□ -0.25
LIMK1-201ENST00000336180 GGCXP38435 758 aa13.51□□□□□ -0.25
LIMK1-201ENST00000336180 USP50Q70EL3 339 aaPredicted RBP13.51□□□□□ -0.25
LIMK1-201ENST00000336180 C11orf70Q9BRQ4 267 aa13.51□□□□□ -0.25
LIMK1-201ENST00000336180 MYPNQ86TC9 1320 aa13.51□□□□□ -0.25
LIMK1-201ENST00000336180 MAP2K7O14733 419 aa13.51□□□□□ -0.25
LIMK1-201ENST00000336180 TTI1O43156 1089 aa13.51□□□□□ -0.25
LIMK1-201ENST00000336180 PRKCBP05771 671 aa13.51□□□□□ -0.25
LIMK1-201ENST00000336180 MYL6P60660 151 aa13.51□□□□□ -0.25
LIMK1-201ENST00000336180 CCDC70Q6NSX1 233 aa13.51□□□□□ -0.25
LIMK1-201ENST00000336180 DPP9Q86TI2 863 aa13.51□□□□□ -0.25
LIMK1-201ENST00000336180 TXLNBQ8N3L3 684 aa13.51□□□□□ -0.25
LIMK1-201ENST00000336180 SHC3Q92529 594 aa13.51□□□□□ -0.25
LIMK1-201ENST00000336180 WDR90Q96KV7 1748 aa13.51□□□□□ -0.25
LIMK1-201ENST00000336180 FAM49AQ9H0Q0 323 aaPredicted RBP13.51□□□□□ -0.25
LIMK1-201ENST00000336180 AKT3Q9Y243 479 aa13.51□□□□□ -0.25
LIMK1-201ENST00000336180 PIK3R2O00459 728 aa13.51□□□□□ -0.25
LIMK1-201ENST00000336180 TMEM253P0C7T8 217 aa13.51□□□□□ -0.25
LIMK1-201ENST00000336180 INSRRP14616 1297 aa13.51□□□□□ -0.25
LIMK1-201ENST00000336180 NAMPTP43490 491 aa13.51□□□□□ -0.25
LIMK1-201ENST00000336180 TERF2Q15554 542 aa13.51□□□□□ -0.25
LIMK1-201ENST00000336180 KCTD16Q68DU8 428 aa13.51□□□□□ -0.25
LIMK1-201ENST00000336180 MMGT1Q8N4V1 131 aa13.51□□□□□ -0.25
LIMK1-201ENST00000336180 ACSF2Q96CM8 615 aaPredicted RBP13.51□□□□□ -0.25
LIMK1-201ENST00000336180 TIPINQ9BVW5 301 aa13.51□□□□□ -0.25
LIMK1-201ENST00000336180 CXCL16Q9H2A7 254 aa13.51□□□□□ -0.25
LIMK1-201ENST00000336180 CENPHQ9H3R5 247 aa13.51□□□□□ -0.25
LIMK1-201ENST00000336180 KCNH4Q9UQ05 1017 aa13.51□□□□□ -0.25
LIMK1-201ENST00000336180 PTPRFP10586 1907 aa13.5□□□□□ -0.25
LIMK1-201ENST00000336180 SPOPO43791 374 aa13.5□□□□□ -0.25
LIMK1-201ENST00000336180 ADCY3O60266 1144 aa13.5□□□□□ -0.25
LIMK1-201ENST00000336180 TARBP2Q15633 366 aaKnown RBP13.5□□□□□ -0.25
LIMK1-201ENST00000336180 WDR44Q5JSH3 913 aa13.5□□□□□ -0.25
LIMK1-201ENST00000336180 WDR93Q6P2C0 686 aa13.5□□□□□ -0.25
LIMK1-201ENST00000336180 WDR81Q562E7 1941 aa13.5□□□□□ -0.25
LIMK1-201ENST00000336180 A0A087WZ62 844 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms