RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 RBAKQ9NYW8 714 aaPredicted RBP15.32■□□□□ 0.04
APOBEC3B-202ENST00000335760 FRMD4BQ9Y2L6 1034 aa15.32■□□□□ 0.04
APOBEC3B-202ENST00000335760 FNDC1Q4ZHG4 1894 aaPredicted RBP15.32■□□□□ 0.04
APOBEC3B-202ENST00000335760 COL4A6Q14031 1691 aa15.31■□□□□ 0.04
APOBEC3B-202ENST00000335760 A0A1W2PPC1 479 aa15.31■□□□□ 0.04
APOBEC3B-202ENST00000335760 LACTBL1A8MY62 500 aa15.31■□□□□ 0.04
APOBEC3B-202ENST00000335760 POMCP01189 267 aa15.31■□□□□ 0.04
APOBEC3B-202ENST00000335760 ERCC5P28715 1186 aaPredicted RBP15.31■□□□□ 0.04
APOBEC3B-202ENST00000335760 SCNN1GP51170 649 aa15.31■□□□□ 0.04
APOBEC3B-202ENST00000335760 FKBP3Q00688 224 aaKnown RBP15.31■□□□□ 0.04
APOBEC3B-202ENST00000335760 POU5F1Q01860 360 aaKnown RBP15.31■□□□□ 0.04
APOBEC3B-202ENST00000335760 PPP2R3AQ06190 1150 aa15.31■□□□□ 0.04
APOBEC3B-202ENST00000335760 BTG3Q14201 252 aaPredicted RBP15.31■□□□□ 0.04
APOBEC3B-202ENST00000335760 SNRNP35Q16560 246 aaKnown RBP15.31■□□□□ 0.04
APOBEC3B-202ENST00000335760 ALKAL1Q6UXT8 129 aa15.31■□□□□ 0.04
APOBEC3B-202ENST00000335760 C11orf57Q6ZUT1 292 aaPredicted RBP15.31■□□□□ 0.04
APOBEC3B-202ENST00000335760 BRSK2Q8IWQ3 736 aa15.31■□□□□ 0.04
APOBEC3B-202ENST00000335760 CMTR2Q8IYT2 770 aaKnown RBP15.31■□□□□ 0.04
APOBEC3B-202ENST00000335760 MED15Q96RN5 788 aa15.31■□□□□ 0.04
APOBEC3B-202ENST00000335760 FUCA2Q9BTY2 467 aa15.31■□□□□ 0.04
APOBEC3B-202ENST00000335760 DNAJC25Q9H1X3 360 aa15.31■□□□□ 0.04
APOBEC3B-202ENST00000335760 RC3H2Q9HBD1 1191 aaKnown RBP15.31■□□□□ 0.04
APOBEC3B-202ENST00000335760 CITO14578 2027 aa15.31■□□□□ 0.04
APOBEC3B-202ENST00000335760 TTC26A0AVF1 554 aa15.3■□□□□ 0.04
APOBEC3B-202ENST00000335760 PTGESO14684 152 aa15.3■□□□□ 0.04
APOBEC3B-202ENST00000335760 INPPL1O15357 1258 aa15.3■□□□□ 0.04
APOBEC3B-202ENST00000335760 ADRB2P07550 413 aa15.3■□□□□ 0.04
APOBEC3B-202ENST00000335760 MYOGP15173 224 aa15.3■□□□□ 0.04
APOBEC3B-202ENST00000335760 RNASELQ05823 741 aaKnown RBP15.3■□□□□ 0.04
APOBEC3B-202ENST00000335760 SPAG1Q07617 926 aa15.3■□□□□ 0.04
APOBEC3B-202ENST00000335760 ANO6Q4KMQ2 910 aa15.3■□□□□ 0.04
APOBEC3B-202ENST00000335760 XKR4Q5GH76 650 aa15.3■□□□□ 0.04
APOBEC3B-202ENST00000335760 GLRA4Q5JXX5 417 aa15.3■□□□□ 0.04
APOBEC3B-202ENST00000335760 FOXR2Q6PJQ5 311 aa15.3■□□□□ 0.04
APOBEC3B-202ENST00000335760 ZC3H3Q8IXZ2 948 aaKnown RBP15.3■□□□□ 0.04
APOBEC3B-202ENST00000335760 CSGALNACT2Q8N6G5 542 aa15.3■□□□□ 0.04
APOBEC3B-202ENST00000335760 GSTCDQ8NEC7 633 aa15.3■□□□□ 0.04
APOBEC3B-202ENST00000335760 RSPH1Q8WYR4 309 aa15.3■□□□□ 0.04
APOBEC3B-202ENST00000335760 MRPL9Q9BYD2 267 aaKnown RBP15.3■□□□□ 0.04
APOBEC3B-202ENST00000335760 TBC1D13Q9NVG8 400 aa15.3■□□□□ 0.04
APOBEC3B-202ENST00000335760 CNTN3Q9P232 1028 aa15.3■□□□□ 0.04
APOBEC3B-202ENST00000335760 KANSL3Q9P2N6 904 aa15.3■□□□□ 0.04
APOBEC3B-202ENST00000335760 PCDHA11Q9Y5I1 949 aa15.3■□□□□ 0.04
APOBEC3B-202ENST00000335760 RALGAPA2Q2PPJ7 1873 aa15.3■□□□□ 0.04
APOBEC3B-202ENST00000335760 GBF1Q92538 1859 aa15.3■□□□□ 0.04
APOBEC3B-202ENST00000335760 SMIM28A0A1B0GU29 152 aa15.29■□□□□ 0.04
APOBEC3B-202ENST00000335760 LCHNA4D1U4 455 aa15.29■□□□□ 0.04
APOBEC3B-202ENST00000335760 AKAP3O75969 853 aa15.29■□□□□ 0.04
APOBEC3B-202ENST00000335760 IL18RAPO95256 599 aa15.29■□□□□ 0.04
APOBEC3B-202ENST00000335760 THP07101 528 aa15.29■□□□□ 0.04
APOBEC3B-202ENST00000335760 PSMC2P35998 433 aaKnown RBP15.29■□□□□ 0.04
APOBEC3B-202ENST00000335760 PBX2P40425 430 aa15.29■□□□□ 0.04
APOBEC3B-202ENST00000335760 WNT7BP56706 349 aa15.29■□□□□ 0.04
APOBEC3B-202ENST00000335760 CYP24A1Q07973 514 aa15.29■□□□□ 0.04
APOBEC3B-202ENST00000335760 TPD52L1Q16890 204 aaPredicted RBP15.29■□□□□ 0.04
APOBEC3B-202ENST00000335760 LRRC55Q6ZSA7 311 aa15.29■□□□□ 0.04
APOBEC3B-202ENST00000335760 CD302Q8IX05 232 aa15.29■□□□□ 0.04
APOBEC3B-202ENST00000335760 FAM186BQ8IYM0 893 aa15.29■□□□□ 0.04
APOBEC3B-202ENST00000335760 LRRC43Q8N309 656 aa15.29■□□□□ 0.04
APOBEC3B-202ENST00000335760 FIBCD1Q8N539 461 aa15.29■□□□□ 0.04
APOBEC3B-202ENST00000335760 KIF12Q96FN5 646 aa15.29■□□□□ 0.04
APOBEC3B-202ENST00000335760 MFSD14AQ96MC6 490 aa15.29■□□□□ 0.04
APOBEC3B-202ENST00000335760 CEP63Q96MT8 703 aa15.29■□□□□ 0.04
APOBEC3B-202ENST00000335760 ZMAT2Q96NC0 199 aaKnown RBP15.29■□□□□ 0.04
APOBEC3B-202ENST00000335760 FAM193BQ96PV7 902 aaPredicted RBP15.29■□□□□ 0.04
APOBEC3B-202ENST00000335760 SRRTQ9BXP5 876 aaKnown RBP15.29■□□□□ 0.04
APOBEC3B-202ENST00000335760 PBX4Q9BYU1 374 aa15.29■□□□□ 0.04
APOBEC3B-202ENST00000335760 PDE11AQ9HCR9 933 aa15.29■□□□□ 0.04
APOBEC3B-202ENST00000335760 HCSTQ9UBK5 93 aa15.29■□□□□ 0.04
APOBEC3B-202ENST00000335760 MSRAQ9UJ68 235 aa15.29■□□□□ 0.04
APOBEC3B-202ENST00000335760 PLAGL2Q9UPG8 496 aa15.29■□□□□ 0.04
APOBEC3B-202ENST00000335760 TRIP11Q15643 1979 aa15.29■□□□□ 0.04
APOBEC3B-202ENST00000335760 ANK1P16157 1881 aa15.28■□□□□ 0.04
APOBEC3B-202ENST00000335760 MAPK13O15264 365 aa15.28■□□□□ 0.04
APOBEC3B-202ENST00000335760 FGFR1OPO95684 399 aaKnown RBP15.28■□□□□ 0.04
APOBEC3B-202ENST00000335760 EPB41P11171 864 aaKnown RBP15.28■□□□□ 0.04
APOBEC3B-202ENST00000335760 KCNE1P15382 129 aa15.28■□□□□ 0.04
APOBEC3B-202ENST00000335760 GRIK3Q13003 919 aa15.28■□□□□ 0.04
APOBEC3B-202ENST00000335760 PSMD6Q15008 389 aa15.28■□□□□ 0.04
APOBEC3B-202ENST00000335760 RAB30Q15771 203 aa15.28■□□□□ 0.04
APOBEC3B-202ENST00000335760 SPOUT1Q5T280 376 aaKnown RBP15.28■□□□□ 0.04
APOBEC3B-202ENST00000335760 JADE1Q6IE81 842 aa15.28■□□□□ 0.04
APOBEC3B-202ENST00000335760 ZNF280BQ86YH2 543 aa15.28■□□□□ 0.04
APOBEC3B-202ENST00000335760 SP7Q8TDD2 431 aaPredicted RBP15.28■□□□□ 0.04
APOBEC3B-202ENST00000335760 CCDC127Q96BQ5 260 aa15.28■□□□□ 0.04
APOBEC3B-202ENST00000335760 NAT10Q9H0A0 1025 aaKnown RBP15.28■□□□□ 0.04
APOBEC3B-202ENST00000335760 ASB7Q9H672 318 aa15.28■□□□□ 0.04
APOBEC3B-202ENST00000335760 YBX2Q9Y2T7 364 aaKnown RBP15.28■□□□□ 0.04
APOBEC3B-202ENST00000335760 MRPL42Q9Y6G3 142 aaKnown RBP15.28■□□□□ 0.04
APOBEC3B-202ENST00000335760 TDRD15B5MCY1 1934 aaKnown RBP15.28■□□□□ 0.04
APOBEC3B-202ENST00000335760 SLC16A3O15427 465 aaKnown RBP15.27■□□□□ 0.04
APOBEC3B-202ENST00000335760 DDHD2O94830 711 aa15.27■□□□□ 0.04
APOBEC3B-202ENST00000335760 CA3P07451 260 aa15.27■□□□□ 0.04
APOBEC3B-202ENST00000335760 NFICP08651 508 aa15.27■□□□□ 0.04
APOBEC3B-202ENST00000335760 SMAD3P84022 425 aaKnown RBP15.27■□□□□ 0.04
APOBEC3B-202ENST00000335760 TMEM132DQ14C87 1099 aa15.27■□□□□ 0.04
APOBEC3B-202ENST00000335760 SURF1Q15526 300 aa15.27■□□□□ 0.04
APOBEC3B-202ENST00000335760 LRIT3Q3SXY7 679 aa15.27■□□□□ 0.04
APOBEC3B-202ENST00000335760 SPATA1Q5VX52 437 aa15.27■□□□□ 0.04
APOBEC3B-202ENST00000335760 FILIP1Q7Z7B0 1213 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms