RNA–Protein interactions for RNA: ENST00000334464.6

PDZD8-201, Transcript of PDZ domain containing 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD8, Length 9,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD8-201ENST00000334464 HIST1H2ADP20671 130 aa17.52■□□□□ 0.39
PDZD8-201ENST00000334464 TRMT2AQ8IZ69 625 aaKnown RBP17.52■□□□□ 0.39
PDZD8-201ENST00000334464 STKLD1Q8NE28 680 aa17.52■□□□□ 0.39
PDZD8-201ENST00000334464 HIST1H2AHQ96KK5 128 aa17.52■□□□□ 0.39
PDZD8-201ENST00000334464 HIST1H2AJQ99878 128 aa17.52■□□□□ 0.39
PDZD8-201ENST00000334464 H2AFJQ9BTM1 129 aa17.52■□□□□ 0.39
PDZD8-201ENST00000334464 TARBP1Q13395 1621 aaKnown RBP17.52■□□□□ 0.39
PDZD8-201ENST00000334464 MICAL3Q7RTP6 2002 aa17.52■□□□□ 0.39
PDZD8-201ENST00000334464 SPDYE5A6NIY4 337 aa17.52■□□□□ 0.39
PDZD8-201ENST00000334464 FTLP02792 175 aaPredicted RBP17.52■□□□□ 0.39
PDZD8-201ENST00000334464 GGCXP38435 758 aa17.52■□□□□ 0.39
PDZD8-201ENST00000334464 RGS4P49798 205 aa17.52■□□□□ 0.39
PDZD8-201ENST00000334464 SPDYE7PQ495Y7 208 aa17.52■□□□□ 0.39
PDZD8-201ENST00000334464 LRRC8EQ6NSJ5 796 aa17.52■□□□□ 0.39
PDZD8-201ENST00000334464 SRPK1Q96SB4 655 aaKnown RBP17.52■□□□□ 0.39
PDZD8-201ENST00000334464 C11orf70Q9BRQ4 267 aa17.52■□□□□ 0.39
PDZD8-201ENST00000334464 ADAM21Q9UKJ8 722 aa17.52■□□□□ 0.39
PDZD8-201ENST00000334464 MRFAP1Q9Y605 127 aa17.52■□□□□ 0.39
PDZD8-201ENST00000334464 DFFAO00273 331 aa17.52■□□□□ 0.39
PDZD8-201ENST00000334464 KRT14P02533 472 aa17.52■□□□□ 0.39
PDZD8-201ENST00000334464 RMDN1Q96DB5 314 aa17.52■□□□□ 0.39
PDZD8-201ENST00000334464 ALDH8A1Q9H2A2 487 aaPredicted RBP17.52■□□□□ 0.39
PDZD8-201ENST00000334464 INPP5FQ9Y2H2 1132 aa17.52■□□□□ 0.39
PDZD8-201ENST00000334464 POTEMA6NI47 508 aa17.51■□□□□ 0.39
PDZD8-201ENST00000334464 BRAFP15056 766 aa17.51■□□□□ 0.39
PDZD8-201ENST00000334464 WRNIP1Q96S55 665 aa17.51■□□□□ 0.39
PDZD8-201ENST00000334464 KRCC1Q9NPI7 259 aaPredicted RBP17.51■□□□□ 0.39
PDZD8-201ENST00000334464 MAGEB2O15479 319 aa17.51■□□□□ 0.39
PDZD8-201ENST00000334464 KCNJ6P48051 423 aa17.51■□□□□ 0.39
PDZD8-201ENST00000334464 SNX24Q9Y343 169 aa17.51■□□□□ 0.39
PDZD8-201ENST00000334464 PCDHA10Q9Y5I2 948 aa17.51■□□□□ 0.39
PDZD8-201ENST00000334464 CCDC195A0A1B0GUA6 201 aa17.51■□□□□ 0.39
PDZD8-201ENST00000334464 PDXKO00764 312 aa17.51■□□□□ 0.39
PDZD8-201ENST00000334464 PRKCQQ04759 706 aa17.51■□□□□ 0.39
PDZD8-201ENST00000334464 SH3RF3Q8TEJ3 882 aaPredicted RBP17.51■□□□□ 0.39
PDZD8-201ENST00000334464 DHX35Q9H5Z1 703 aaKnown RBP17.51■□□□□ 0.39
PDZD8-201ENST00000334464 MYH7P12883 1935 aa17.51■□□□□ 0.39
PDZD8-201ENST00000334464 ABCC3O15438 1527 aa17.51■□□□□ 0.39
PDZD8-201ENST00000334464 CLTCL1P53675 1640 aa17.51■□□□□ 0.39
PDZD8-201ENST00000334464 PRR23D1E9PI22 279 aaPredicted RBP17.51■□□□□ 0.39
PDZD8-201ENST00000334464 PRR23D2P0DMB1 279 aaPredicted RBP17.51■□□□□ 0.39
PDZD8-201ENST00000334464 HMOX2P30519 316 aa17.51■□□□□ 0.39
PDZD8-201ENST00000334464 HPCAP84074 193 aa17.51■□□□□ 0.39
PDZD8-201ENST00000334464 SCFD2Q8WU76 684 aa17.51■□□□□ 0.39
PDZD8-201ENST00000334464 CCDC90BQ9GZT6 254 aa17.51■□□□□ 0.39
PDZD8-201ENST00000334464 NMRK1Q9NWW6 199 aa17.51■□□□□ 0.39
PDZD8-201ENST00000334464 METP08581 1390 aa17.51■□□□□ 0.39
PDZD8-201ENST00000334464 CDH16O75309 829 aa17.51■□□□□ 0.39
PDZD8-201ENST00000334464 ACCSLQ4AC99 568 aa17.51■□□□□ 0.39
PDZD8-201ENST00000334464 UNC5CLQ8IV45 518 aa17.51■□□□□ 0.39
PDZD8-201ENST00000334464 SPATA16Q9BXB7 569 aa17.51■□□□□ 0.39
PDZD8-201ENST00000334464 PLEKHA5Q9HAU0 1116 aa17.51■□□□□ 0.39
PDZD8-201ENST00000334464 ORC4O43929 436 aa17.51■□□□□ 0.39
PDZD8-201ENST00000334464 TLR2O60603 784 aa17.51■□□□□ 0.39
PDZD8-201ENST00000334464 TRPC1P48995 793 aa17.51■□□□□ 0.39
PDZD8-201ENST00000334464 PDCLQ13371 301 aa17.51■□□□□ 0.39
PDZD8-201ENST00000334464 TEX2Q8IWB9 1127 aa17.51■□□□□ 0.39
PDZD8-201ENST00000334464 VPS37AQ8NEZ2 397 aa17.51■□□□□ 0.39
PDZD8-201ENST00000334464 SENP7Q9BQF6 1050 aa17.51■□□□□ 0.39
PDZD8-201ENST00000334464 SATB2Q9UPW6 733 aa17.51■□□□□ 0.39
PDZD8-201ENST00000334464 MMP10P09238 476 aa17.51■□□□□ 0.39
PDZD8-201ENST00000334464 PTPN12Q05209 780 aaKnown RBP17.51■□□□□ 0.39
PDZD8-201ENST00000334464 HIPK4Q8NE63 616 aa17.51■□□□□ 0.39
PDZD8-201ENST00000334464 PGBD4Q96DM1 585 aa17.51■□□□□ 0.39
PDZD8-201ENST00000334464 CLCA2Q9UQC9 943 aa17.51■□□□□ 0.39
PDZD8-201ENST00000334464 TRAF3IP3Q9Y228 551 aa17.51■□□□□ 0.39
PDZD8-201ENST00000334464 GFPT1Q06210 699 aaPredicted RBP17.5■□□□□ 0.39
PDZD8-201ENST00000334464 DEPDC1Q5TB30 811 aa17.5■□□□□ 0.39
PDZD8-201ENST00000334464 ZFP42Q96MM3 310 aa17.5■□□□□ 0.39
PDZD8-201ENST00000334464 HINFPQ9BQA5 517 aa17.5■□□□□ 0.39
PDZD8-201ENST00000334464 TMEM47Q9BQJ4 181 aa17.5■□□□□ 0.39
PDZD8-201ENST00000334464 POLE3Q9NRF9 147 aa17.5■□□□□ 0.39
PDZD8-201ENST00000334464 SEPT3Q9UH03 358 aa17.5■□□□□ 0.39
PDZD8-201ENST00000334464 CDY2AQ9Y6F7 541 aa17.5■□□□□ 0.39
PDZD8-201ENST00000334464 CDY1Q9Y6F8 540 aa17.5■□□□□ 0.39
PDZD8-201ENST00000334464 LLGL1Q15334 1064 aa17.5■□□□□ 0.39
PDZD8-201ENST00000334464 TEX9Q8N6V9 391 aa17.5■□□□□ 0.39
PDZD8-201ENST00000334464 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.5■□□□□ 0.39
PDZD8-201ENST00000334464 NARFQ9UHQ1 456 aa17.5■□□□□ 0.39
PDZD8-201ENST00000334464 H2AFYO75367 372 aaKnown RBP17.5■□□□□ 0.39
PDZD8-201ENST00000334464 PRCPP42785 496 aa17.5■□□□□ 0.39
PDZD8-201ENST00000334464 ARSEP51690 589 aa17.5■□□□□ 0.39
PDZD8-201ENST00000334464 RIBC1Q8N443 379 aaPredicted RBP17.5■□□□□ 0.39
PDZD8-201ENST00000334464 TTLL11Q8NHH1 800 aa17.5■□□□□ 0.39
PDZD8-201ENST00000334464 RUNX1T1Q06455 604 aa17.5■□□□□ 0.39
PDZD8-201ENST00000334464 FAM161BQ96MY7 647 aa17.5■□□□□ 0.39
PDZD8-201ENST00000334464 CASZ1Q86V15 1759 aa17.5■□□□□ 0.39
PDZD8-201ENST00000334464 PDS5AQ29RF7 1337 aaKnown RBP17.5■□□□□ 0.39
PDZD8-201ENST00000334464 PLEKHA8P1O95397 391 aa17.5■□□□□ 0.39
PDZD8-201ENST00000334464 AGTP01019 485 aa17.5■□□□□ 0.39
PDZD8-201ENST00000334464 ACADSBP45954 432 aa17.5■□□□□ 0.39
PDZD8-201ENST00000334464 DEFA1P59665 94 aa17.5■□□□□ 0.39
PDZD8-201ENST00000334464 DEFA3P59666 94 aa17.5■□□□□ 0.39
PDZD8-201ENST00000334464 FAM47EQ6ZV65 393 aa17.5■□□□□ 0.39
PDZD8-201ENST00000334464 TRAPPC11Q7Z392 1133 aa17.5■□□□□ 0.39
PDZD8-201ENST00000334464 ECT2Q9H8V3 914 aa17.5■□□□□ 0.39
PDZD8-201ENST00000334464 ECE2O60344 883 aa17.5■□□□□ 0.39
PDZD8-201ENST00000334464 SFSWAPQ12872 951 aaKnown RBP17.5■□□□□ 0.39
PDZD8-201ENST00000334464 ETNK1Q9HBU6 452 aa17.5■□□□□ 0.39
PDZD8-201ENST00000334464 SLC16A4O15374 487 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms