RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 ZNF385CQ66K41 422 aaPredicted RBP1.84□□□□□ -2.12
LINC00643-201ENST00000334389 NEK5Q6P3R8 708 aa1.84□□□□□ -2.12
LINC00643-201ENST00000334389 Q6ZPB1 254 aaPredicted RBP1.84□□□□□ -2.12
LINC00643-201ENST00000334389 LIAT1Q6ZQX7 453 aa1.84□□□□□ -2.12
LINC00643-201ENST00000334389 ERICH6Q7L0X2 663 aa1.84□□□□□ -2.12
LINC00643-201ENST00000334389 SRGAP1Q7Z6B7 1085 aa1.84□□□□□ -2.12
LINC00643-201ENST00000334389 TXNRD3Q86VQ6 643 aa1.84□□□□□ -2.12
LINC00643-201ENST00000334389 SYT14Q8NB59 555 aa1.84□□□□□ -2.12
LINC00643-201ENST00000334389 CHDHQ8NE62 594 aaPredicted RBP1.84□□□□□ -2.12
LINC00643-201ENST00000334389 GDPD5Q8WTR4 605 aa1.84□□□□□ -2.12
LINC00643-201ENST00000334389 CRYGNQ8WXF5 182 aa1.84□□□□□ -2.12
LINC00643-201ENST00000334389 LENG1Q96BZ8 264 aaPredicted RBP1.84□□□□□ -2.12
LINC00643-201ENST00000334389 CEP89Q96ST8 783 aa1.84□□□□□ -2.12
LINC00643-201ENST00000334389 MPHOSPH8Q99549 860 aa1.84□□□□□ -2.12
LINC00643-201ENST00000334389 C19orf43Q9BQ61 176 aa1.84□□□□□ -2.12
LINC00643-201ENST00000334389 TIPINQ9BVW5 301 aa1.84□□□□□ -2.12
LINC00643-201ENST00000334389 SLC2A11Q9BYW1 496 aa1.84□□□□□ -2.12
LINC00643-201ENST00000334389 NT5C3AQ9H0P0 336 aa1.84□□□□□ -2.12
LINC00643-201ENST00000334389 EPB41L1Q9H4G0 881 aa1.84□□□□□ -2.12
LINC00643-201ENST00000334389 KCNK12Q9HB15 430 aa1.84□□□□□ -2.12
LINC00643-201ENST00000334389 ZDHHC4Q9NPG8 344 aa1.84□□□□□ -2.12
LINC00643-201ENST00000334389 DACT1Q9NYF0 836 aa1.84□□□□□ -2.12
LINC00643-201ENST00000334389 TRPM5Q9NZQ8 1165 aa1.84□□□□□ -2.12
LINC00643-201ENST00000334389 EXOC6BQ9Y2D4 811 aa1.84□□□□□ -2.12
LINC00643-201ENST00000334389 HUWE1Q7Z6Z7 4374 aaKnown RBP1.84□□□□□ -2.12
LINC00643-201ENST00000334389 A0A0U1RQF3 1178 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 KHNYNO15037 678 aaKnown RBP1.83□□□□□ -2.12
LINC00643-201ENST00000334389 LRCH4O75427 683 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 STAU1O95793 577 aaKnown RBP1.83□□□□□ -2.12
LINC00643-201ENST00000334389 CYP11A1P05108 521 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 CD63P08962 238 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 MS4A1P11836 297 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 XRCC6P12956 609 aaKnown RBP eCLIP1.83□□□□□ -2.12
LINC00643-201ENST00000334389 SCG2P13521 617 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 ENPP1P22413 925 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 USP5P45974 858 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 CXCL12P48061 93 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 PER3P56645 1201 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 TLE3Q04726 772 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 MTMR2Q13614 643 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 ELF2Q15723 593 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 KPRPQ5T749 579 aaPredicted RBP1.83□□□□□ -2.12
LINC00643-201ENST00000334389 FAM117BQ6P1L5 589 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 LVRNQ6Q4G3 990 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 IGFL2Q6UWQ7 119 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 LMBR1LQ6UX01 489 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 B3GNT9Q6UX72 402 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 DPP9Q86TI2 863 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 NT5DC4Q86YG4 428 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 NAXDQ8IW45 347 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 LIX1Q8N485 282 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 TMEM145Q8NBT3 493 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 GALNT6Q8NCL4 622 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 NUP43Q8NFH3 380 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 IGSF8Q969P0 613 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 RPS6KC1Q96S38 1066 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 AGAP2Q99490 1192 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 SPRY4Q9C004 299 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 INO80BQ9C086 356 aaPredicted RBP1.83□□□□□ -2.12
LINC00643-201ENST00000334389 RNF38Q9H0F5 515 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 ZFP64Q9NPA5 681 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 DDX4Q9NQI0 724 aaKnown RBP1.83□□□□□ -2.12
LINC00643-201ENST00000334389 BEX4Q9NWD9 120 aaPredicted RBP1.83□□□□□ -2.12
LINC00643-201ENST00000334389 IL37Q9NZH6 218 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 PRDM4Q9UKN5 801 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 CEP131Q9UPN4 1083 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 DMTF1Q9Y222 760 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 ATG2BQ96BY7 2078 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 FAT2Q9NYQ8 4349 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 PIEZO1Q92508 2521 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 WDR27A2RRH5 827 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 IGHDP01880 384 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 GLI1P08151 1106 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 TYRP1P17643 537 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 TYMPP19971 482 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 CYP2C19P33261 490 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 MPLP40238 635 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 EEF1A1P68104 462 aaKnown RBP1.83□□□□□ -2.12
LINC00643-201ENST00000334389 TFF2Q03403 129 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 EEF1A2Q05639 463 aaKnown RBP1.83□□□□□ -2.12
LINC00643-201ENST00000334389 PPP2R5BQ15173 497 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 PDCD2Q16342 344 aaPredicted RBP1.83□□□□□ -2.12
LINC00643-201ENST00000334389 EEF1A1P5Q5VTE0 462 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 SFMBT2Q5VUG0 894 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 MCTP1Q6DN14 999 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 SSX8Q7RTT4 187 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 SMAP1Q8IYB5 467 aaPredicted RBP1.83□□□□□ -2.12
LINC00643-201ENST00000334389 EID3Q8N140 333 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 AZIN2Q96A70 460 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 CDCA7LQ96GN5 454 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 PRR11Q96HE9 360 aaPredicted RBP1.83□□□□□ -2.12
LINC00643-201ENST00000334389 NAP1L4Q99733 375 aaKnown RBP1.83□□□□□ -2.12
LINC00643-201ENST00000334389 JADE2Q9NQC1 790 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 BIN2Q9UBW5 565 aaPredicted RBP1.83□□□□□ -2.12
LINC00643-201ENST00000334389 LIMD1Q9UGP4 676 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 STOML2Q9UJZ1 356 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 MMP17Q9ULZ9 603 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 SLC27A6Q9Y2P4 619 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 KMT2AQ03164 3969 aa1.83□□□□□ -2.12
LINC00643-201ENST00000334389 B4E171 279 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms