RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 LMCD1Q9NZU5 365 aa11.93□□□□□ -0.5
POLR1B-202ENST00000333990 KRT3P12035 628 aa11.93□□□□□ -0.5
POLR1B-202ENST00000333990 GRIK1P39086 918 aa11.93□□□□□ -0.5
POLR1B-202ENST00000333990 ZNF280AP59817 542 aaPredicted RBP11.93□□□□□ -0.5
POLR1B-202ENST00000333990 TRAPPC11Q7Z392 1133 aa11.93□□□□□ -0.5
POLR1B-202ENST00000333990 PDE11AQ9HCR9 933 aa11.93□□□□□ -0.5
POLR1B-202ENST00000333990 MKRN1Q9UHC7 482 aaKnown RBP11.93□□□□□ -0.5
POLR1B-202ENST00000333990 PCDHAC2Q9Y5I4 1007 aa11.93□□□□□ -0.5
POLR1B-202ENST00000333990 ADGRG1Q9Y653 693 aa11.93□□□□□ -0.5
POLR1B-202ENST00000333990 TMEM88BA6NKF7 163 aa11.92□□□□□ -0.5
POLR1B-202ENST00000333990 NDUFAB1O14561 156 aa11.92□□□□□ -0.5
POLR1B-202ENST00000333990 ZC3H11AO75152 810 aaKnown RBP eCLIP11.92□□□□□ -0.5
POLR1B-202ENST00000333990 SERPINB6P35237 376 aa11.92□□□□□ -0.5
POLR1B-202ENST00000333990 RAB27AP51159 221 aa11.92□□□□□ -0.5
POLR1B-202ENST00000333990 KPNA2P52292 529 aaKnown RBP11.92□□□□□ -0.5
POLR1B-202ENST00000333990 PLTPP55058 493 aa11.92□□□□□ -0.5
POLR1B-202ENST00000333990 DR1Q01658 176 aa11.92□□□□□ -0.5
POLR1B-202ENST00000333990 RAD51Q06609 339 aa11.92□□□□□ -0.5
POLR1B-202ENST00000333990 SLC18A3Q16572 532 aa11.92□□□□□ -0.5
POLR1B-202ENST00000333990 KIZQ2M2Z5 673 aa11.92□□□□□ -0.5
POLR1B-202ENST00000333990 GLE1Q53GS7 698 aaKnown RBP11.92□□□□□ -0.5
POLR1B-202ENST00000333990 B4GALNT4Q76KP1 1039 aa11.92□□□□□ -0.5
POLR1B-202ENST00000333990 CCDC13Q8IYE1 715 aa11.92□□□□□ -0.5
POLR1B-202ENST00000333990 TMC2Q8TDI7 906 aa11.92□□□□□ -0.5
POLR1B-202ENST00000333990 SPIRE2Q8WWL2 714 aa11.92□□□□□ -0.5
POLR1B-202ENST00000333990 LSM7Q9UK45 103 aaKnown RBP11.92□□□□□ -0.5
POLR1B-202ENST00000333990 FAM86B1E9PN63 330 aa11.92□□□□□ -0.5
POLR1B-202ENST00000333990 RNF40O75150 1001 aa11.92□□□□□ -0.5
POLR1B-202ENST00000333990 FAM86B2P0C5J1 330 aa11.92□□□□□ -0.5
POLR1B-202ENST00000333990 ZBTB48P10074 688 aaPredicted RBP11.92□□□□□ -0.5
POLR1B-202ENST00000333990 GRIK4Q16099 956 aa11.92□□□□□ -0.5
POLR1B-202ENST00000333990 LY6KQ17RY6 165 aa11.92□□□□□ -0.5
POLR1B-202ENST00000333990 ZNF720Q7Z2F6 126 aa11.92□□□□□ -0.5
POLR1B-202ENST00000333990 PPP4R1Q8TF05 950 aa11.92□□□□□ -0.5
POLR1B-202ENST00000333990 CFAP57Q96MR6 1250 aa11.92□□□□□ -0.5
POLR1B-202ENST00000333990 ERGIC2Q96RQ1 377 aa11.92□□□□□ -0.5
POLR1B-202ENST00000333990 UBN1Q9NPG3 1134 aa11.92□□□□□ -0.5
POLR1B-202ENST00000333990 GPRC5CQ9NQ84 441 aa11.92□□□□□ -0.5
POLR1B-202ENST00000333990 RSPH14Q9UHP6 348 aa11.92□□□□□ -0.5
POLR1B-202ENST00000333990 KIAA1257Q9ULG3 409 aa11.92□□□□□ -0.5
POLR1B-202ENST00000333990 FARP1Q9Y4F1 1045 aaPredicted RBP11.92□□□□□ -0.5
POLR1B-202ENST00000333990 ZNF541Q9H0D2 1346 aa11.92□□□□□ -0.5
POLR1B-202ENST00000333990 CA4P22748 312 aa11.92□□□□□ -0.5
POLR1B-202ENST00000333990 MAP2K5Q13163 448 aa11.92□□□□□ -0.5
POLR1B-202ENST00000333990 THOC5Q13769 683 aaKnown RBP11.92□□□□□ -0.5
POLR1B-202ENST00000333990 LLGL1Q15334 1064 aa11.92□□□□□ -0.5
POLR1B-202ENST00000333990 CC2D1AQ6P1N0 951 aaPredicted RBP11.92□□□□□ -0.5
POLR1B-202ENST00000333990 EXOC4Q96A65 974 aa11.92□□□□□ -0.5
POLR1B-202ENST00000333990 EPAS1Q99814 870 aa11.92□□□□□ -0.5
POLR1B-202ENST00000333990 KLHL8Q9P2G9 620 aaPredicted RBP11.92□□□□□ -0.5
POLR1B-202ENST00000333990 KLRG2A4D1S0 409 aaPredicted RBP11.91□□□□□ -0.5
POLR1B-202ENST00000333990 GOLGA8KD6RF30 607 aa11.91□□□□□ -0.5
POLR1B-202ENST00000333990 BCAR1P56945 870 aa11.91□□□□□ -0.5
POLR1B-202ENST00000333990 ELAVL2Q12926 359 aaKnown RBP11.91□□□□□ -0.5
POLR1B-202ENST00000333990 CAPN12Q6ZSI9 719 aa11.91□□□□□ -0.5
POLR1B-202ENST00000333990 ZC3H4Q9UPT8 1303 aaKnown RBP11.91□□□□□ -0.5
POLR1B-202ENST00000333990 ROBO3Q96MS0 1386 aa11.91□□□□□ -0.5
POLR1B-202ENST00000333990 ODC1P11926 461 aa11.91□□□□□ -0.5
POLR1B-202ENST00000333990 FSCN1Q16658 493 aaKnown RBP11.91□□□□□ -0.5
POLR1B-202ENST00000333990 CENPUQ71F23 418 aa11.91□□□□□ -0.5
POLR1B-202ENST00000333990 ZNF410Q86VK4 478 aa11.91□□□□□ -0.5
POLR1B-202ENST00000333990 GDAP1L1Q96MZ0 367 aa11.91□□□□□ -0.5
POLR1B-202ENST00000333990 LOC102724159A0A0B4J2E5 919 aa11.91□□□□□ -0.5
POLR1B-202ENST00000333990 A0A1W2PQJ5 194 aa11.91□□□□□ -0.5
POLR1B-202ENST00000333990 PPP1R3GB7ZBB8 358 aa11.91□□□□□ -0.5
POLR1B-202ENST00000333990 PRRG1O14668 218 aa11.91□□□□□ -0.5
POLR1B-202ENST00000333990 EVI5O60447 810 aa11.91□□□□□ -0.5
POLR1B-202ENST00000333990 CYBBP04839 570 aa11.91□□□□□ -0.5
POLR1B-202ENST00000333990 TROVE2P10155 538 aaKnown RBP eCLIP11.91□□□□□ -0.5
POLR1B-202ENST00000333990 AXLP30530 894 aa11.91□□□□□ -0.5
POLR1B-202ENST00000333990 HSD17B4P51659 736 aa11.91□□□□□ -0.5
POLR1B-202ENST00000333990 NR1I3Q14994 352 aa11.91□□□□□ -0.5
POLR1B-202ENST00000333990 PWP2Q15269 919 aaKnown RBP11.91□□□□□ -0.5
POLR1B-202ENST00000333990 FAM117BQ6P1L5 589 aa11.91□□□□□ -0.5
POLR1B-202ENST00000333990 PCGF5Q86SE9 256 aa11.91□□□□□ -0.5
POLR1B-202ENST00000333990 STKLD1Q8NE28 680 aa11.91□□□□□ -0.5
POLR1B-202ENST00000333990 KIFC3Q9BVG8 833 aa11.91□□□□□ -0.5
POLR1B-202ENST00000333990 MED4Q9NPJ6 270 aa11.91□□□□□ -0.5
POLR1B-202ENST00000333990 TJP2Q9UDY2 1190 aa11.91□□□□□ -0.5
POLR1B-202ENST00000333990 PCSK1NQ9UHG2 260 aa11.91□□□□□ -0.5
POLR1B-202ENST00000333990 LTBP3Q9NS15 1303 aa11.91□□□□□ -0.5
POLR1B-202ENST00000333990 RSPH10B2B2RC85 870 aa11.9□□□□□ -0.5
POLR1B-202ENST00000333990 RSPH10BP0C881 870 aa11.9□□□□□ -0.5
POLR1B-202ENST00000333990 PSEN2P49810 448 aa11.9□□□□□ -0.5
POLR1B-202ENST00000333990 CUL1Q13616 776 aa11.9□□□□□ -0.5
POLR1B-202ENST00000333990 MFSD10Q14728 455 aa11.9□□□□□ -0.5
POLR1B-202ENST00000333990 FAM110CQ1W6H9 321 aa11.9□□□□□ -0.5
POLR1B-202ENST00000333990 WHAMMQ8TF30 809 aa11.9□□□□□ -0.5
POLR1B-202ENST00000333990 DDX27Q96GQ7 796 aaKnown RBP11.9□□□□□ -0.5
POLR1B-202ENST00000333990 APBA2Q99767 749 aa11.9□□□□□ -0.5
POLR1B-202ENST00000333990 KANSL3Q9P2N6 904 aa11.9□□□□□ -0.5
POLR1B-202ENST00000333990 MAGED2Q9UNF1 606 aaPredicted RBP11.9□□□□□ -0.5
POLR1B-202ENST00000333990 A0A087WZ62 844 aa11.9□□□□□ -0.5
POLR1B-202ENST00000333990 ADCY3O60266 1144 aa11.9□□□□□ -0.5
POLR1B-202ENST00000333990 B3GAT3O94766 335 aa11.9□□□□□ -0.5
POLR1B-202ENST00000333990 ASPHQ12797 758 aa11.9□□□□□ -0.5
POLR1B-202ENST00000333990 ANKRD20A3Q5VUR7 823 aa11.9□□□□□ -0.5
POLR1B-202ENST00000333990 CENPPQ6IPU0 288 aa11.9□□□□□ -0.5
POLR1B-202ENST00000333990 NFRKBQ6P4R8 1299 aa11.9□□□□□ -0.5
POLR1B-202ENST00000333990 ZPBP2Q6X784 338 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms