RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 WNT8AQ9H1J5 351 aa13.2□□□□□ -0.3
VPS33B-201ENST00000333371 CCPG1Q9ULG6 757 aa13.2□□□□□ -0.3
VPS33B-201ENST00000333371 RFX1P22670 979 aa13.19□□□□□ -0.3
VPS33B-201ENST00000333371 IRX3P78415 501 aaPredicted RBP13.19□□□□□ -0.3
VPS33B-201ENST00000333371 MRPS9P82933 396 aaKnown RBP13.19□□□□□ -0.3
VPS33B-201ENST00000333371 ADCY2Q08462 1091 aa13.19□□□□□ -0.3
VPS33B-201ENST00000333371 LACTB2Q53H82 288 aaPredicted RBP13.19□□□□□ -0.3
VPS33B-201ENST00000333371 C6orf118Q5T5N4 469 aa13.19□□□□□ -0.3
VPS33B-201ENST00000333371 LMBRD2Q68DH5 695 aaPredicted RBP13.19□□□□□ -0.3
VPS33B-201ENST00000333371 HIBCHQ6NVY1 386 aaPredicted RBP13.19□□□□□ -0.3
VPS33B-201ENST00000333371 TMEM206Q9H813 350 aa13.19□□□□□ -0.3
VPS33B-201ENST00000333371 PCNTO95613 3336 aa13.19□□□□□ -0.3
VPS33B-201ENST00000333371 DOCK5Q9H7D0 1870 aa13.19□□□□□ -0.3
VPS33B-201ENST00000333371 CHUKO15111 745 aa13.19□□□□□ -0.3
VPS33B-201ENST00000333371 ATP9AO75110 1047 aa13.19□□□□□ -0.3
VPS33B-201ENST00000333371 AGTP01019 485 aa13.19□□□□□ -0.3
VPS33B-201ENST00000333371 GH1P01241 217 aa13.19□□□□□ -0.3
VPS33B-201ENST00000333371 RARGP13631 454 aa13.19□□□□□ -0.3
VPS33B-201ENST00000333371 EIF2AK2P19525 551 aaKnown RBP13.19□□□□□ -0.3
VPS33B-201ENST00000333371 YWHABP31946 246 aaKnown RBP13.19□□□□□ -0.3
VPS33B-201ENST00000333371 TGFB2P61812 414 aa13.19□□□□□ -0.3
VPS33B-201ENST00000333371 CNGA2Q16280 664 aa13.19□□□□□ -0.3
VPS33B-201ENST00000333371 PIGWQ7Z7B1 504 aa13.19□□□□□ -0.3
VPS33B-201ENST00000333371 ANKRD42Q8N9B4 389 aa13.19□□□□□ -0.3
VPS33B-201ENST00000333371 HELQQ8TDG4 1101 aa13.19□□□□□ -0.3
VPS33B-201ENST00000333371 PSPC1Q8WXF1 523 aaKnown RBP13.19□□□□□ -0.3
VPS33B-201ENST00000333371 SHC3Q92529 594 aa13.19□□□□□ -0.3
VPS33B-201ENST00000333371 SGSM3Q96HU1 749 aa13.19□□□□□ -0.3
VPS33B-201ENST00000333371 NCAPGQ9BPX3 1015 aa13.19□□□□□ -0.3
VPS33B-201ENST00000333371 ASIC3Q9UHC3 531 aa13.19□□□□□ -0.3
VPS33B-201ENST00000333371 FEM1BQ9UK73 627 aa13.19□□□□□ -0.3
VPS33B-201ENST00000333371 PASKQ96RG2 1323 aa13.18□□□□□ -0.3
VPS33B-201ENST00000333371 WDR81Q562E7 1941 aa13.18□□□□□ -0.3
VPS33B-201ENST00000333371 ECEL1O95672 775 aa13.18□□□□□ -0.3
VPS33B-201ENST00000333371 KRT5P13647 590 aa13.18□□□□□ -0.3
VPS33B-201ENST00000333371 RWDD2BP57060 319 aa13.18□□□□□ -0.3
VPS33B-201ENST00000333371 SNCBQ16143 134 aa13.18□□□□□ -0.3
VPS33B-201ENST00000333371 CYP1B1Q16678 543 aa13.18□□□□□ -0.3
VPS33B-201ENST00000333371 SGO2Q562F6 1265 aa13.18□□□□□ -0.3
VPS33B-201ENST00000333371 CCDC91Q7Z6B0 441 aa13.18□□□□□ -0.3
VPS33B-201ENST00000333371 GDAP1Q8TB36 358 aa13.18□□□□□ -0.3
VPS33B-201ENST00000333371 RIT2Q99578 217 aa13.18□□□□□ -0.3
VPS33B-201ENST00000333371 HEMGNQ9BXL5 484 aa13.18□□□□□ -0.3
VPS33B-201ENST00000333371 ZNF341Q9BYN7 854 aa13.18□□□□□ -0.3
VPS33B-201ENST00000333371 TBK1Q9UHD2 729 aa13.18□□□□□ -0.3
VPS33B-201ENST00000333371 ANAPC7Q9UJX3 599 aa13.18□□□□□ -0.3
VPS33B-201ENST00000333371 MTUS1Q9ULD2 1270 aa13.18□□□□□ -0.3
VPS33B-201ENST00000333371 AGAP1Q9UPQ3 857 aa13.18□□□□□ -0.3
VPS33B-201ENST00000333371 R3HDM2Q9Y2K5 976 aaKnown RBP13.18□□□□□ -0.3
VPS33B-201ENST00000333371 ZNF536O15090 1300 aa13.18□□□□□ -0.3
VPS33B-201ENST00000333371 ASTN2O75129 1339 aaPredicted RBP13.18□□□□□ -0.3
VPS33B-201ENST00000333371 CYP1A2P05177 515 aa13.18□□□□□ -0.3
VPS33B-201ENST00000333371 GZMAP12544 262 aa13.18□□□□□ -0.3
VPS33B-201ENST00000333371 HSPA6P17066 643 aa13.18□□□□□ -0.3
VPS33B-201ENST00000333371 MAP2K2P36507 400 aa13.18□□□□□ -0.3
VPS33B-201ENST00000333371 QARSP47897 775 aaKnown RBP13.18□□□□□ -0.3
VPS33B-201ENST00000333371 GTF2BQ00403 316 aa13.18□□□□□ -0.3
VPS33B-201ENST00000333371 KYNUQ16719 465 aa13.18□□□□□ -0.3
VPS33B-201ENST00000333371 TKFCQ3LXA3 575 aa13.18□□□□□ -0.3
VPS33B-201ENST00000333371 ARMC9Q7Z3E5 817 aa13.18□□□□□ -0.3
VPS33B-201ENST00000333371 CPA5Q8WXQ8 436 aa13.18□□□□□ -0.3
VPS33B-201ENST00000333371 KDM4CQ9H3R0 1056 aa13.18□□□□□ -0.3
VPS33B-201ENST00000333371 FGFR1OP2Q9NVK5 253 aa13.18□□□□□ -0.3
VPS33B-201ENST00000333371 CNOT7Q9UIV1 285 aaKnown RBP13.18□□□□□ -0.3
VPS33B-201ENST00000333371 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.18□□□□□ -0.3
VPS33B-201ENST00000333371 TELO2Q9Y4R8 837 aa13.18□□□□□ -0.3
VPS33B-201ENST00000333371 GRIN3BO60391 1043 aa13.17□□□□□ -0.3
VPS33B-201ENST00000333371 MYCLP12524 364 aaPredicted RBP13.17□□□□□ -0.3
VPS33B-201ENST00000333371 CALCOCO2Q13137 446 aa13.17□□□□□ -0.3
VPS33B-201ENST00000333371 XRCC4Q13426 336 aa13.17□□□□□ -0.3
VPS33B-201ENST00000333371 MPP2Q14168 576 aa13.17□□□□□ -0.3
VPS33B-201ENST00000333371 ZKSCAN8Q15776 578 aaPredicted RBP13.17□□□□□ -0.3
VPS33B-201ENST00000333371 TBC1D1Q86TI0 1168 aaPredicted RBP13.17□□□□□ -0.3
VPS33B-201ENST00000333371 FMNL3Q8IVF7 1028 aa13.17□□□□□ -0.3
VPS33B-201ENST00000333371 PARD3BQ8TEW8 1205 aa13.17□□□□□ -0.3
VPS33B-201ENST00000333371 DYDC1Q8WWB3 177 aa13.17□□□□□ -0.3
VPS33B-201ENST00000333371 TCP11Q8WWU5 503 aa13.17□□□□□ -0.3
VPS33B-201ENST00000333371 BSNDQ8WZ55 320 aa13.17□□□□□ -0.3
VPS33B-201ENST00000333371 DDX1Q92499 740 aaKnown RBP13.17□□□□□ -0.3
VPS33B-201ENST00000333371 TBC1D31Q96DN5 1066 aa13.17□□□□□ -0.3
VPS33B-201ENST00000333371 AGO4Q9HCK5 861 aaKnown RBP13.17□□□□□ -0.3
VPS33B-201ENST00000333371 GTF3C4Q9UKN8 822 aa13.17□□□□□ -0.3
VPS33B-201ENST00000333371 TMEM120BA0PK00 339 aa13.17□□□□□ -0.3
VPS33B-201ENST00000333371 TCP11X1B4DZS4 312 aa13.17□□□□□ -0.3
VPS33B-201ENST00000333371 SORBS3O60504 671 aa13.17□□□□□ -0.3
VPS33B-201ENST00000333371 MTA2O94776 668 aa13.17□□□□□ -0.3
VPS33B-201ENST00000333371 MUTP22033 750 aa13.17□□□□□ -0.3
VPS33B-201ENST00000333371 RDXP35241 583 aaKnown RBP13.17□□□□□ -0.3
VPS33B-201ENST00000333371 PDE6CP51160 858 aa13.17□□□□□ -0.3
VPS33B-201ENST00000333371 ELF3P78545 371 aaPredicted RBP13.17□□□□□ -0.3
VPS33B-201ENST00000333371 CDR2Q01850 454 aa13.17□□□□□ -0.3
VPS33B-201ENST00000333371 TNFAIP1Q13829 316 aa13.17□□□□□ -0.3
VPS33B-201ENST00000333371 XKR9Q5GH70 373 aa13.17□□□□□ -0.3
VPS33B-201ENST00000333371 TNFAIP8L3Q5GJ75 292 aa13.17□□□□□ -0.3
VPS33B-201ENST00000333371 TEX2Q8IWB9 1127 aa13.17□□□□□ -0.3
VPS33B-201ENST00000333371 CYP4X1Q8N118 509 aa13.17□□□□□ -0.3
VPS33B-201ENST00000333371 ARHGEF2Q92974 986 aaKnown RBP13.17□□□□□ -0.3
VPS33B-201ENST00000333371 YY1AP1Q9H869 796 aa13.17□□□□□ -0.3
VPS33B-201ENST00000333371 KCNK9Q9NPC2 374 aa13.17□□□□□ -0.3
VPS33B-201ENST00000333371 SAMD15Q9P1V8 674 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms