RNA–Protein interactions for RNA: ENST00000333130.3

MRPL40-201, Transcript of mitochondrial ribosomal protein L40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL40, Length 1,387 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-201ENST00000333130 IKZF4Q9H2S9 585 aa22.35■■□□□ 1.17
MRPL40-201ENST00000333130 NRDE2Q9H7Z3 1164 aa22.35■■□□□ 1.17
MRPL40-201ENST00000333130 RPF1Q9H9Y2 349 aaKnown RBP22.35■■□□□ 1.17
MRPL40-201ENST00000333130 SLC38A7Q9NVC3 462 aa22.35■■□□□ 1.17
MRPL40-201ENST00000333130 SPG21Q9NZD8 308 aa22.35■■□□□ 1.17
MRPL40-201ENST00000333130 TMEM63CQ9P1W3 806 aa22.35■■□□□ 1.17
MRPL40-201ENST00000333130 PLXNA4Q9HCM2 1894 aa22.34■■□□□ 1.17
MRPL40-201ENST00000333130 TRANK1O15050 2925 aa22.34■■□□□ 1.17
MRPL40-201ENST00000333130 FOSL2P15408 326 aa22.34■■□□□ 1.17
MRPL40-201ENST00000333130 KNOP1Q1ED39 458 aaKnown RBP22.34■■□□□ 1.17
MRPL40-201ENST00000333130 NELFCDQ8IXH7 590 aa22.34■■□□□ 1.17
MRPL40-201ENST00000333130 GUF1Q8N442 669 aaKnown RBP22.34■■□□□ 1.17
MRPL40-201ENST00000333130 TMEM169Q96HH4 297 aa22.34■■□□□ 1.17
MRPL40-201ENST00000333130 SNX27Q96L92 541 aa22.34■■□□□ 1.17
MRPL40-201ENST00000333130 HAPLN2Q9GZV7 340 aa22.34■■□□□ 1.17
MRPL40-201ENST00000333130 LMAN2LQ9H0V9 348 aa22.34■■□□□ 1.17
MRPL40-201ENST00000333130 PLEKHA5Q9HAU0 1116 aa22.34■■□□□ 1.17
MRPL40-201ENST00000333130 HCSTQ9UBK5 93 aa22.34■■□□□ 1.17
MRPL40-201ENST00000333130 STK39Q9UEW8 545 aa22.34■■□□□ 1.17
MRPL40-201ENST00000333130 PUF60Q9UHX1 559 aaKnown RBP22.34■■□□□ 1.17
MRPL40-201ENST00000333130 ANK1P16157 1881 aa22.33■■□□□ 1.17
MRPL40-201ENST00000333130 ALDH2P05091 517 aa22.33■■□□□ 1.17
MRPL40-201ENST00000333130 IGFBP4P22692 258 aa22.33■■□□□ 1.17
MRPL40-201ENST00000333130 UBE3AQ05086 875 aa22.33■■□□□ 1.17
MRPL40-201ENST00000333130 CD302Q8IX05 232 aa22.33■■□□□ 1.17
MRPL40-201ENST00000333130 SMYD4Q8IYR2 804 aaPredicted RBP22.33■■□□□ 1.17
MRPL40-201ENST00000333130 KLHL23Q8NBE8 558 aa22.33■■□□□ 1.17
MRPL40-201ENST00000333130 MYLIPQ8WY64 445 aa22.33■■□□□ 1.17
MRPL40-201ENST00000333130 GUCD1Q96NT3 240 aa22.33■■□□□ 1.17
MRPL40-201ENST00000333130 KCTD10Q9H3F6 313 aa22.33■■□□□ 1.17
MRPL40-201ENST00000333130 CNTN3Q9P232 1028 aa22.33■■□□□ 1.17
MRPL40-201ENST00000333130 FAN1Q9Y2M0 1017 aa22.33■■□□□ 1.17
MRPL40-201ENST00000333130 TISP43B9A030 160 aa22.32■■□□□ 1.16
MRPL40-201ENST00000333130 TGFB1I1O43294 461 aa22.32■■□□□ 1.16
MRPL40-201ENST00000333130 XPOTO43592 962 aaKnown RBP22.32■■□□□ 1.16
MRPL40-201ENST00000333130 FAM189A1O60320 539 aa22.32■■□□□ 1.16
MRPL40-201ENST00000333130 FGF18O76093 207 aa22.32■■□□□ 1.16
MRPL40-201ENST00000333130 CXCL8P10145 99 aa22.32■■□□□ 1.16
MRPL40-201ENST00000333130 ADSSP30520 456 aa22.32■■□□□ 1.16
MRPL40-201ENST00000333130 OR1G1P47890 313 aa22.32■■□□□ 1.16
MRPL40-201ENST00000333130 AFF1P51825 1210 aaKnown RBP22.32■■□□□ 1.16
MRPL40-201ENST00000333130 POU5F1Q01860 360 aaKnown RBP22.32■■□□□ 1.16
MRPL40-201ENST00000333130 TUSC3Q13454 348 aa22.32■■□□□ 1.16
MRPL40-201ENST00000333130 BMS1Q14692 1282 aaKnown RBP22.32■■□□□ 1.16
MRPL40-201ENST00000333130 SKOR2Q2VWA4 1001 aaPredicted RBP22.32■■□□□ 1.16
MRPL40-201ENST00000333130 SEZ6Q53EL9 994 aa22.32■■□□□ 1.16
MRPL40-201ENST00000333130 ZNF280BQ86YH2 543 aa22.32■■□□□ 1.16
MRPL40-201ENST00000333130 TSPAN18Q96SJ8 248 aa22.32■■□□□ 1.16
MRPL40-201ENST00000333130 LMCD1Q9NZU5 365 aa22.32■■□□□ 1.16
MRPL40-201ENST00000333130 EPOPA6NHQ4 379 aa22.31■■□□□ 1.16
MRPL40-201ENST00000333130 BIN1O00499 593 aa22.31■■□□□ 1.16
MRPL40-201ENST00000333130 PTGESO14684 152 aa22.31■■□□□ 1.16
MRPL40-201ENST00000333130 DDHD2O94830 711 aa22.31■■□□□ 1.16
MRPL40-201ENST00000333130 PRCPP42785 496 aa22.31■■□□□ 1.16
MRPL40-201ENST00000333130 DSC1Q08554 894 aa22.31■■□□□ 1.16
MRPL40-201ENST00000333130 CAVIN1Q6NZI2 390 aaKnown RBP22.31■■□□□ 1.16
MRPL40-201ENST00000333130 COLGALT2Q8IYK4 626 aa22.31■■□□□ 1.16
MRPL40-201ENST00000333130 GSTCDQ8NEC7 633 aa22.31■■□□□ 1.16
MRPL40-201ENST00000333130 NOC3LQ8WTT2 800 aaKnown RBP22.31■■□□□ 1.16
MRPL40-201ENST00000333130 TMEM174Q8WUU8 243 aa22.31■■□□□ 1.16
MRPL40-201ENST00000333130 SYAP1Q96A49 352 aaPredicted RBP22.31■■□□□ 1.16
MRPL40-201ENST00000333130 KIAA1586Q9HCI6 787 aa22.31■■□□□ 1.16
MRPL40-201ENST00000333130 MIOSQ9NXC5 875 aa22.31■■□□□ 1.16
MRPL40-201ENST00000333130 DNAJB4Q9UDY4 337 aa22.31■■□□□ 1.16
MRPL40-201ENST00000333130 CPSF3Q9UKF6 684 aaKnown RBP22.31■■□□□ 1.16
MRPL40-201ENST00000333130 PLAGL2Q9UPG8 496 aa22.31■■□□□ 1.16
MRPL40-201ENST00000333130 LZTS1Q9Y250 596 aa22.31■■□□□ 1.16
MRPL40-201ENST00000333130 RFXAPO00287 272 aa22.3■■□□□ 1.16
MRPL40-201ENST00000333130 ITGB1P05556 798 aa22.3■■□□□ 1.16
MRPL40-201ENST00000333130 GALTP07902 379 aa22.3■■□□□ 1.16
MRPL40-201ENST00000333130 KCNE1P15382 129 aa22.3■■□□□ 1.16
MRPL40-201ENST00000333130 PBX3P40426 434 aa22.3■■□□□ 1.16
MRPL40-201ENST00000333130 TNFSF9P41273 254 aa22.3■■□□□ 1.16
MRPL40-201ENST00000333130 SLC11A1P49279 550 aa22.3■■□□□ 1.16
MRPL40-201ENST00000333130 ACOT2P49753 483 aa22.3■■□□□ 1.16
MRPL40-201ENST00000333130 PLCB3Q01970 1234 aa22.3■■□□□ 1.16
MRPL40-201ENST00000333130 STIM1Q13586 685 aa22.3■■□□□ 1.16
MRPL40-201ENST00000333130 XKR4Q5GH76 650 aa22.3■■□□□ 1.16
MRPL40-201ENST00000333130 GLRA4Q5JXX5 417 aa22.3■■□□□ 1.16
MRPL40-201ENST00000333130 ISM2Q6H9L7 571 aa22.3■■□□□ 1.16
MRPL40-201ENST00000333130 ALKAL1Q6UXT8 129 aa22.3■■□□□ 1.16
MRPL40-201ENST00000333130 C12orf56Q8IXR9 622 aa22.3■■□□□ 1.16
MRPL40-201ENST00000333130 ADSSL1Q8N142 457 aa22.3■■□□□ 1.16
MRPL40-201ENST00000333130 SLC39A11Q8N1S5 342 aa22.3■■□□□ 1.16
MRPL40-201ENST00000333130 GPD1LQ8N335 351 aa22.3■■□□□ 1.16
MRPL40-201ENST00000333130 FAM212AQ96EL1 285 aa22.3■■□□□ 1.16
MRPL40-201ENST00000333130 UROC1Q96N76 676 aa22.3■■□□□ 1.16
MRPL40-201ENST00000333130 FAM213AQ9BRX8 229 aa22.3■■□□□ 1.16
MRPL40-201ENST00000333130 COLEC11Q9BWP8 271 aa22.3■■□□□ 1.16
MRPL40-201ENST00000333130 AGPAT3Q9NRZ7 376 aa22.3■■□□□ 1.16
MRPL40-201ENST00000333130 MAPK8IP1Q9UQF2 711 aa22.3■■□□□ 1.16
MRPL40-201ENST00000333130 SMIM28A0A1B0GU29 152 aa22.29■■□□□ 1.16
MRPL40-201ENST00000333130 PDXKO00764 312 aa22.29■■□□□ 1.16
MRPL40-201ENST00000333130 EXTL3O43909 919 aa22.29■■□□□ 1.16
MRPL40-201ENST00000333130 IL18RAPO95256 599 aa22.29■■□□□ 1.16
MRPL40-201ENST00000333130 PPP1R2P41236 205 aa22.29■■□□□ 1.16
MRPL40-201ENST00000333130 ENOX2Q16206 610 aaKnown RBP22.29■■□□□ 1.16
MRPL40-201ENST00000333130 SLC10A6Q3KNW5 377 aa22.29■■□□□ 1.16
MRPL40-201ENST00000333130 PPP2R3CQ969Q6 453 aa22.29■■□□□ 1.16
MRPL40-201ENST00000333130 MRPL38Q96DV4 380 aaKnown RBP22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms