RNA–Protein interactions for RNA: ENST00000332303.5

NSMCE3-201, Transcript of NSE3 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 BASIC

Gene NSMCE3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE3-201ENST00000332303 ZNF235Q14590 738 aa17.52■□□□□ 0.39
NSMCE3-201ENST00000332303 SNRNP35Q16560 246 aaKnown RBP17.52■□□□□ 0.39
NSMCE3-201ENST00000332303 E4F1Q66K89 784 aaPredicted RBP17.52■□□□□ 0.39
NSMCE3-201ENST00000332303 USP49Q70CQ1 688 aa17.52■□□□□ 0.39
NSMCE3-201ENST00000332303 FAM151AQ8WW52 585 aa17.52■□□□□ 0.39
NSMCE3-201ENST00000332303 TRIM54Q9BYV2 358 aa17.52■□□□□ 0.39
NSMCE3-201ENST00000332303 SMYD3Q9H7B4 428 aa17.52■□□□□ 0.39
NSMCE3-201ENST00000332303 ANLNQ9NQW6 1124 aa17.52■□□□□ 0.39
NSMCE3-201ENST00000332303 HACD3Q9P035 362 aa17.52■□□□□ 0.39
NSMCE3-201ENST00000332303 KDM6AO15550 1401 aaPredicted RBP17.52■□□□□ 0.39
NSMCE3-201ENST00000332303 NPHP3-ACAD11A0A0J9YXS1 232 aa17.51■□□□□ 0.39
NSMCE3-201ENST00000332303 TNPO2O14787 897 aaKnown RBP17.51■□□□□ 0.39
NSMCE3-201ENST00000332303 MAGEB2O15479 319 aa17.51■□□□□ 0.39
NSMCE3-201ENST00000332303 ANP32DO95626 131 aa17.51■□□□□ 0.39
NSMCE3-201ENST00000332303 KITP10721 976 aa17.51■□□□□ 0.39
NSMCE3-201ENST00000332303 RALAP11233 206 aa17.51■□□□□ 0.39
NSMCE3-201ENST00000332303 PDGFRAP16234 1089 aa17.51■□□□□ 0.39
NSMCE3-201ENST00000332303 POLE2P56282 527 aa17.51■□□□□ 0.39
NSMCE3-201ENST00000332303 NCOA4Q13772 614 aa17.51■□□□□ 0.39
NSMCE3-201ENST00000332303 FBXO33Q7Z6M2 555 aa17.51■□□□□ 0.39
NSMCE3-201ENST00000332303 CLEC10AQ8IUN9 316 aa17.51■□□□□ 0.39
NSMCE3-201ENST00000332303 ZNF280CQ8ND82 737 aa17.51■□□□□ 0.39
NSMCE3-201ENST00000332303 LRRC1Q9BTT6 524 aa17.51■□□□□ 0.39
NSMCE3-201ENST00000332303 MKNK1Q9BUB5 465 aa17.51■□□□□ 0.39
NSMCE3-201ENST00000332303 MOSPD1Q9UJG1 213 aa17.51■□□□□ 0.39
NSMCE3-201ENST00000332303 PIN4Q9Y237 131 aaKnown RBP17.51■□□□□ 0.39
NSMCE3-201ENST00000332303 SNX9Q9Y5X1 595 aa17.51■□□□□ 0.39
NSMCE3-201ENST00000332303 ATXN8OSP0DMR3 200 aa17.51■□□□□ 0.39
NSMCE3-201ENST00000332303 SGSM1Q2NKQ1 1148 aa17.51■□□□□ 0.39
NSMCE3-201ENST00000332303 RPAINQ86UA6 219 aa17.51■□□□□ 0.39
NSMCE3-201ENST00000332303 MICALL2Q8IY33 904 aa17.51■□□□□ 0.39
NSMCE3-201ENST00000332303 CNOT7Q9UIV1 285 aaKnown RBP17.51■□□□□ 0.39
NSMCE3-201ENST00000332303 STXBP3O00186 592 aa17.51■□□□□ 0.39
NSMCE3-201ENST00000332303 MAFGO15525 162 aa17.51■□□□□ 0.39
NSMCE3-201ENST00000332303 NR1I3Q14994 352 aa17.51■□□□□ 0.39
NSMCE3-201ENST00000332303 RAPGEF5Q92565 580 aa17.51■□□□□ 0.39
NSMCE3-201ENST00000332303 EGFL8Q99944 293 aa17.51■□□□□ 0.39
NSMCE3-201ENST00000332303 ZNF212Q9UDV6 495 aa17.51■□□□□ 0.39
NSMCE3-201ENST00000332303 RNF17Q9BXT8 1623 aaKnown RBP17.51■□□□□ 0.39
NSMCE3-201ENST00000332303 PITPNM2Q9BZ72 1349 aa17.51■□□□□ 0.39
NSMCE3-201ENST00000332303 CDH16O75309 829 aa17.51■□□□□ 0.39
NSMCE3-201ENST00000332303 EEF1DP29692 281 aaKnown RBP17.51■□□□□ 0.39
NSMCE3-201ENST00000332303 LRRC14Q15048 493 aa17.51■□□□□ 0.39
NSMCE3-201ENST00000332303 TMEM143Q96AN5 459 aa17.51■□□□□ 0.39
NSMCE3-201ENST00000332303 RPA1P27694 616 aa17.5■□□□□ 0.39
NSMCE3-201ENST00000332303 CAPRIN1Q14444 709 aaKnown RBP17.5■□□□□ 0.39
NSMCE3-201ENST00000332303 FASTKD1Q53R41 847 aaKnown RBP17.5■□□□□ 0.39
NSMCE3-201ENST00000332303 ZBTB41Q5SVQ8 909 aa17.5■□□□□ 0.39
NSMCE3-201ENST00000332303 EPB41L4AQ9HCS5 686 aaPredicted RBP17.5■□□□□ 0.39
NSMCE3-201ENST00000332303 AGPAT5Q9NUQ2 364 aa17.5■□□□□ 0.39
NSMCE3-201ENST00000332303 NDE1Q9NXR1 346 aa17.5■□□□□ 0.39
NSMCE3-201ENST00000332303 RNF103-CHMP3A0A140T963 221 aa17.5■□□□□ 0.39
NSMCE3-201ENST00000332303 AP3B1O00203 1094 aa17.5■□□□□ 0.39
NSMCE3-201ENST00000332303 ESRRBO95718 433 aa17.5■□□□□ 0.39
NSMCE3-201ENST00000332303 E2F4Q16254 413 aa17.5■□□□□ 0.39
NSMCE3-201ENST00000332303 MTHFD1LQ6UB35 978 aa17.5■□□□□ 0.39
NSMCE3-201ENST00000332303 CENPKQ9BS16 269 aa17.5■□□□□ 0.39
NSMCE3-201ENST00000332303 POLR3CQ9BUI4 534 aaPredicted RBP17.5■□□□□ 0.39
NSMCE3-201ENST00000332303 EFTUD2Q15029 972 aaKnown RBP eCLIP17.5■□□□□ 0.39
NSMCE3-201ENST00000332303 TMEM259Q4ZIN3 620 aa17.5■□□□□ 0.39
NSMCE3-201ENST00000332303 SLC35G2Q8TBE7 412 aa17.5■□□□□ 0.39
NSMCE3-201ENST00000332303 WWP1Q9H0M0 922 aa17.5■□□□□ 0.39
NSMCE3-201ENST00000332303 PCDHB2Q9Y5E7 798 aa17.5■□□□□ 0.39
NSMCE3-201ENST00000332303 UBA6A0AVT1 1052 aaPredicted RBP17.5■□□□□ 0.39
NSMCE3-201ENST00000332303 TPI1P60174 286 aa17.5■□□□□ 0.39
NSMCE3-201ENST00000332303 ING2Q9H160 280 aa17.5■□□□□ 0.39
NSMCE3-201ENST00000332303 TRPV6Q9H1D0 765 aa17.5■□□□□ 0.39
NSMCE3-201ENST00000332303 CCDC195A0A1B0GUA6 201 aa17.49■□□□□ 0.39
NSMCE3-201ENST00000332303 F5H423 210 aaPredicted RBP17.49■□□□□ 0.39
NSMCE3-201ENST00000332303 CHGBP05060 677 aa17.49■□□□□ 0.39
NSMCE3-201ENST00000332303 CCZ1BP86790 482 aa17.49■□□□□ 0.39
NSMCE3-201ENST00000332303 CCZ1P86791 482 aaPredicted RBP17.49■□□□□ 0.39
NSMCE3-201ENST00000332303 NAB2Q15742 525 aa17.49■□□□□ 0.39
NSMCE3-201ENST00000332303 SENP7Q9BQF6 1050 aa17.49■□□□□ 0.39
NSMCE3-201ENST00000332303 KIFC3Q9BVG8 833 aa17.49■□□□□ 0.39
NSMCE3-201ENST00000332303 TJP2Q9UDY2 1190 aa17.49■□□□□ 0.39
NSMCE3-201ENST00000332303 ATP9BO43861 1147 aa17.49■□□□□ 0.39
NSMCE3-201ENST00000332303 LCP1P13796 627 aa17.49■□□□□ 0.39
NSMCE3-201ENST00000332303 RBBP8NLQ8NC74 664 aaPredicted RBP17.49■□□□□ 0.39
NSMCE3-201ENST00000332303 OR6J1Q8NGC5 347 aa17.49■□□□□ 0.39
NSMCE3-201ENST00000332303 ASAP3Q8TDY4 903 aa17.49■□□□□ 0.39
NSMCE3-201ENST00000332303 RMDN1Q96DB5 314 aa17.49■□□□□ 0.39
NSMCE3-201ENST00000332303 PTPRUQ92729 1446 aa17.49■□□□□ 0.39
NSMCE3-201ENST00000332303 PIK3R2O00459 728 aa17.49■□□□□ 0.39
NSMCE3-201ENST00000332303 PPP1R37O75864 691 aa17.49■□□□□ 0.39
NSMCE3-201ENST00000332303 AGTP01019 485 aa17.49■□□□□ 0.39
NSMCE3-201ENST00000332303 SLC30A5Q8TAD4 765 aa17.49■□□□□ 0.39
NSMCE3-201ENST00000332303 N4BP2L2Q92802 583 aaPredicted RBP17.49■□□□□ 0.39
NSMCE3-201ENST00000332303 ZNF70Q9UC06 446 aaPredicted RBP17.49■□□□□ 0.39
NSMCE3-201ENST00000332303 CFAP73A6NFT4 308 aa17.49■□□□□ 0.39
NSMCE3-201ENST00000332303 ZBBXA8MT70 800 aa17.49■□□□□ 0.39
NSMCE3-201ENST00000332303 ZNF197O14709 1029 aa17.49■□□□□ 0.39
NSMCE3-201ENST00000332303 NTSR2O95665 410 aa17.49■□□□□ 0.39
NSMCE3-201ENST00000332303 ITIH2P19823 946 aa17.49■□□□□ 0.39
NSMCE3-201ENST00000332303 HSPA9P38646 679 aaKnown RBP17.49■□□□□ 0.39
NSMCE3-201ENST00000332303 SESN2P58004 480 aaPredicted RBP17.49■□□□□ 0.39
NSMCE3-201ENST00000332303 MAP3K20Q9NYL2 800 aaKnown RBP17.49■□□□□ 0.39
NSMCE3-201ENST00000332303 CFAP69A5D8W1 941 aa17.48■□□□□ 0.39
NSMCE3-201ENST00000332303 RARBP10826 455 aa17.48■□□□□ 0.39
NSMCE3-201ENST00000332303 RFC5P40937 340 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms