RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 SKIDA1Q1XH10 827 aa15.95■□□□□ 0.14
CLCNKA-201ENST00000331433 TDRD10Q5VZ19 366 aaKnown RBP15.95■□□□□ 0.14
CLCNKA-201ENST00000331433 EEPD1Q7L9B9 569 aa15.95■□□□□ 0.14
CLCNKA-201ENST00000331433 ZDHHC14Q8IZN3 488 aa15.95■□□□□ 0.14
CLCNKA-201ENST00000331433 DEPTORQ8TB45 409 aa15.95■□□□□ 0.14
CLCNKA-201ENST00000331433 ATP8B4Q8TF62 1192 aa15.95■□□□□ 0.14
CLCNKA-201ENST00000331433 SLC7A3Q8WY07 619 aa15.95■□□□□ 0.14
CLCNKA-201ENST00000331433 CD101Q93033 1021 aa15.95■□□□□ 0.14
CLCNKA-201ENST00000331433 C18orf8Q96DM3 657 aa15.95■□□□□ 0.14
CLCNKA-201ENST00000331433 TARS2Q9BW92 718 aaKnown RBP15.95■□□□□ 0.14
CLCNKA-201ENST00000331433 R3HDMLQ9H3Y0 253 aa15.95■□□□□ 0.14
CLCNKA-201ENST00000331433 LOC285556D6RIA3 1793 aa15.95■□□□□ 0.14
CLCNKA-201ENST00000331433 PTPRFP10586 1907 aa15.95■□□□□ 0.14
CLCNKA-201ENST00000331433 K7ERI5 159 aa15.94■□□□□ 0.14
CLCNKA-201ENST00000331433 PYGMP11217 842 aa15.94■□□□□ 0.14
CLCNKA-201ENST00000331433 ATP1A2P50993 1020 aa15.94■□□□□ 0.14
CLCNKA-201ENST00000331433 IRAK1P51617 712 aa15.94■□□□□ 0.14
CLCNKA-201ENST00000331433 BIRC3Q13489 604 aa15.94■□□□□ 0.14
CLCNKA-201ENST00000331433 PSMD6Q15008 389 aa15.94■□□□□ 0.14
CLCNKA-201ENST00000331433 CRELD2Q6UXH1 353 aaPredicted RBP15.94■□□□□ 0.14
CLCNKA-201ENST00000331433 NCAPG2Q86XI2 1143 aa15.94■□□□□ 0.14
CLCNKA-201ENST00000331433 CD302Q8IX05 232 aa15.94■□□□□ 0.14
CLCNKA-201ENST00000331433 LRRC45Q96CN5 670 aa15.94■□□□□ 0.14
CLCNKA-201ENST00000331433 PCYT2Q99447 389 aa15.94■□□□□ 0.14
CLCNKA-201ENST00000331433 RABEP2Q9H5N1 569 aa15.94■□□□□ 0.14
CLCNKA-201ENST00000331433 CWC15Q9P013 229 aaKnown RBP15.94■□□□□ 0.14
CLCNKA-201ENST00000331433 GSTTP1A0A1W2PQM5 241 aa15.94■□□□□ 0.14
CLCNKA-201ENST00000331433 TCRBV7S2A1N4TA0A589 114 aa15.94■□□□□ 0.14
CLCNKA-201ENST00000331433 FARP2O94887 1054 aaPredicted RBP15.94■□□□□ 0.14
CLCNKA-201ENST00000331433 HLA-DRAP01903 254 aa15.94■□□□□ 0.14
CLCNKA-201ENST00000331433 IVLP07476 585 aa15.94■□□□□ 0.14
CLCNKA-201ENST00000331433 ARL2P36404 184 aa15.94■□□□□ 0.14
CLCNKA-201ENST00000331433 GNGT1P63211 74 aa15.94■□□□□ 0.14
CLCNKA-201ENST00000331433 CLEC16AQ2KHT3 1053 aa15.94■□□□□ 0.14
CLCNKA-201ENST00000331433 ZACNQ401N2 412 aa15.94■□□□□ 0.14
CLCNKA-201ENST00000331433 SEZ6Q53EL9 994 aa15.94■□□□□ 0.14
CLCNKA-201ENST00000331433 ACAD10Q6JQN1 1059 aa15.94■□□□□ 0.14
CLCNKA-201ENST00000331433 PHLDB2Q86SQ0 1253 aa15.94■□□□□ 0.14
CLCNKA-201ENST00000331433 UBLCP1Q8WVY7 318 aaPredicted RBP15.94■□□□□ 0.14
CLCNKA-201ENST00000331433 CEP89Q96ST8 783 aa15.94■□□□□ 0.14
CLCNKA-201ENST00000331433 CNOT8Q9UFF9 292 aaKnown RBP15.94■□□□□ 0.14
CLCNKA-201ENST00000331433 FBXO40Q9UH90 709 aa15.94■□□□□ 0.14
CLCNKA-201ENST00000331433 SOWAHBA6NEL2 793 aa15.93■□□□□ 0.14
CLCNKA-201ENST00000331433 HARSP12081 509 aaKnown RBP15.93■□□□□ 0.14
CLCNKA-201ENST00000331433 CTNNA1P35221 906 aaKnown RBP15.93■□□□□ 0.14
CLCNKA-201ENST00000331433 PIK3CAP42336 1068 aa15.93■□□□□ 0.14
CLCNKA-201ENST00000331433 NAMPTP43490 491 aa15.93■□□□□ 0.14
CLCNKA-201ENST00000331433 CLDN10P78369 228 aa15.93■□□□□ 0.14
CLCNKA-201ENST00000331433 DRP2Q13474 957 aa15.93■□□□□ 0.14
CLCNKA-201ENST00000331433 LLGL1Q15334 1064 aa15.93■□□□□ 0.14
CLCNKA-201ENST00000331433 C2CD6Q53TS8 623 aa15.93■□□□□ 0.14
CLCNKA-201ENST00000331433 GADL1Q6ZQY3 521 aa15.93■□□□□ 0.14
CLCNKA-201ENST00000331433 TMC3Q7Z5M5 1100 aa15.93■□□□□ 0.14
CLCNKA-201ENST00000331433 PRELID2Q8N945 189 aa15.93■□□□□ 0.14
CLCNKA-201ENST00000331433 PAGR1Q9BTK6 254 aa15.93■□□□□ 0.14
CLCNKA-201ENST00000331433 WNT8AQ9H1J5 351 aa15.93■□□□□ 0.14
CLCNKA-201ENST00000331433 CENPHQ9H3R5 247 aa15.93■□□□□ 0.14
CLCNKA-201ENST00000331433 FAM114A2Q9NRY5 505 aa15.93■□□□□ 0.14
CLCNKA-201ENST00000331433 RBAKQ9NYW8 714 aaPredicted RBP15.93■□□□□ 0.14
CLCNKA-201ENST00000331433 STYXL1Q9Y6J8 313 aa15.93■□□□□ 0.14
CLCNKA-201ENST00000331433 ADM5C9JUS6 153 aa15.93■□□□□ 0.14
CLCNKA-201ENST00000331433 H0YGN5 161 aa15.93■□□□□ 0.14
CLCNKA-201ENST00000331433 ZC3H11AO75152 810 aaKnown RBP eCLIP15.93■□□□□ 0.14
CLCNKA-201ENST00000331433 VNN1O95497 513 aa15.93■□□□□ 0.14
CLCNKA-201ENST00000331433 C4BPAP04003 597 aaKnown RBP15.93■□□□□ 0.14
CLCNKA-201ENST00000331433 WDR44Q5JSH3 913 aa15.93■□□□□ 0.14
CLCNKA-201ENST00000331433 SEL1L2Q5TEA6 688 aa15.93■□□□□ 0.14
CLCNKA-201ENST00000331433 LLGL2Q6P1M3 1020 aa15.93■□□□□ 0.14
CLCNKA-201ENST00000331433 ENOSF1Q7L5Y1 443 aa15.93■□□□□ 0.14
CLCNKA-201ENST00000331433 JAMLQ86YT9 394 aa15.93■□□□□ 0.14
CLCNKA-201ENST00000331433 CPA5Q8WXQ8 436 aa15.93■□□□□ 0.14
CLCNKA-201ENST00000331433 ERP44Q9BS26 406 aa15.93■□□□□ 0.14
CLCNKA-201ENST00000331433 MSTO1Q9BUK6 570 aa15.93■□□□□ 0.14
CLCNKA-201ENST00000331433 TRIM7Q9C029 511 aa15.93■□□□□ 0.14
CLCNKA-201ENST00000331433 RAB17Q9H0T7 212 aa15.93■□□□□ 0.14
CLCNKA-201ENST00000331433 KIAA1586Q9HCI6 787 aa15.93■□□□□ 0.14
CLCNKA-201ENST00000331433 UVRAGQ9P2Y5 699 aa15.93■□□□□ 0.14
CLCNKA-201ENST00000331433 NFS1Q9Y697 457 aa15.93■□□□□ 0.14
CLCNKA-201ENST00000331433 GRIN2DO15399 1336 aa15.93■□□□□ 0.14
CLCNKA-201ENST00000331433 IGKV6D-21A0A0A0MT36 114 aa15.92■□□□□ 0.14
CLCNKA-201ENST00000331433 DHX9Q08211 1270 aaKnown RBP15.92■□□□□ 0.14
CLCNKA-201ENST00000331433 PDCLQ13371 301 aa15.92■□□□□ 0.14
CLCNKA-201ENST00000331433 DUPD1Q68J44 220 aa15.92■□□□□ 0.14
CLCNKA-201ENST00000331433 RIOX2Q8IUF8 465 aa15.92■□□□□ 0.14
CLCNKA-201ENST00000331433 NIFKQ9BYG3 293 aaKnown RBP15.92■□□□□ 0.14
CLCNKA-201ENST00000331433 SPATC1LQ9H0A9 340 aa15.92■□□□□ 0.14
CLCNKA-201ENST00000331433 APOBEC3GQ9HC16 384 aaKnown RBP15.92■□□□□ 0.14
CLCNKA-201ENST00000331433 TTLL13PA6NNM8 815 aa15.92■□□□□ 0.14
CLCNKA-201ENST00000331433 PHF2O75151 1096 aa15.92■□□□□ 0.14
CLCNKA-201ENST00000331433 DDNO94850 711 aaPredicted RBP15.92■□□□□ 0.14
CLCNKA-201ENST00000331433 UNGP13051 313 aaPredicted RBP15.92■□□□□ 0.14
CLCNKA-201ENST00000331433 ENPEPQ07075 957 aa15.92■□□□□ 0.14
CLCNKA-201ENST00000331433 CAPSQ13938 189 aa15.92■□□□□ 0.14
CLCNKA-201ENST00000331433 PPP2R5EQ16537 467 aa15.92■□□□□ 0.14
CLCNKA-201ENST00000331433 SCARA3Q6AZY7 606 aa15.92■□□□□ 0.14
CLCNKA-201ENST00000331433 TTC27Q6P3X3 843 aa15.92■□□□□ 0.14
CLCNKA-201ENST00000331433 MAGOHBQ96A72 148 aaKnown RBP15.92■□□□□ 0.14
CLCNKA-201ENST00000331433 ATP6V1G3Q96LB4 118 aa15.92■□□□□ 0.14
CLCNKA-201ENST00000331433 SNX24Q9Y343 169 aa15.92■□□□□ 0.14
CLCNKA-201ENST00000331433 SSTR3P32745 418 aaPredicted RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms