RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 USP17L15C9J2P7 530 aa21.91■■□□□ 1.1
CMTM4-201ENST00000330687 USP17L13C9JLJ4 530 aa21.91■■□□□ 1.1
CMTM4-201ENST00000330687 USP17L11C9JVI0 530 aa21.91■■□□□ 1.1
CMTM4-201ENST00000330687 USP17L18D6R9N7 530 aa21.91■■□□□ 1.1
CMTM4-201ENST00000330687 USP17L22D6RA61 530 aa21.91■■□□□ 1.1
CMTM4-201ENST00000330687 USP17L17D6RBQ6 530 aa21.91■■□□□ 1.1
CMTM4-201ENST00000330687 USP17L19D6RCP7 530 aa21.91■■□□□ 1.1
CMTM4-201ENST00000330687 USP17L20D6RJB6 530 aa21.91■■□□□ 1.1
CMTM4-201ENST00000330687 PLS3P13797 630 aa21.91■■□□□ 1.1
CMTM4-201ENST00000330687 PGM1P36871 562 aa21.91■■□□□ 1.1
CMTM4-201ENST00000330687 FXR2P51116 673 aaKnown RBP eCLIP21.91■■□□□ 1.1
CMTM4-201ENST00000330687 TMEM62Q0P6H9 643 aa21.91■■□□□ 1.1
CMTM4-201ENST00000330687 USP17L24Q0WX57 530 aa21.91■■□□□ 1.1
CMTM4-201ENST00000330687 USP17L6PQ6QN14 398 aa21.91■■□□□ 1.1
CMTM4-201ENST00000330687 RFWD2Q8NHY2 731 aa21.91■■□□□ 1.1
CMTM4-201ENST00000330687 HNRNPCP07910 306 aaKnown RBP eCLIP21.9■■□□□ 1.1
CMTM4-201ENST00000330687 SETSIPP0DME0 302 aa21.9■■□□□ 1.1
CMTM4-201ENST00000330687 SLC1A5Q15758 541 aa21.9■■□□□ 1.1
CMTM4-201ENST00000330687 PHLDB3Q6NSJ2 640 aa21.9■■□□□ 1.1
CMTM4-201ENST00000330687 OTOAQ7RTW8 1153 aa21.9■■□□□ 1.1
CMTM4-201ENST00000330687 SLC5A5Q92911 643 aa21.9■■□□□ 1.1
CMTM4-201ENST00000330687 FAM84BQ96KN1 310 aaPredicted RBP21.9■■□□□ 1.1
CMTM4-201ENST00000330687 RUSC1Q9BVN2 902 aa21.9■■□□□ 1.1
CMTM4-201ENST00000330687 DIS3Q9Y2L1 958 aaKnown RBP21.9■■□□□ 1.1
CMTM4-201ENST00000330687 KDSRQ06136 332 aa21.9■■□□□ 1.1
CMTM4-201ENST00000330687 FRMD5Q7Z6J6 570 aa21.9■■□□□ 1.1
CMTM4-201ENST00000330687 CEP70Q8NHQ1 597 aa21.9■■□□□ 1.1
CMTM4-201ENST00000330687 BHMT2Q9H2M3 363 aa21.9■■□□□ 1.1
CMTM4-201ENST00000330687 PALM3A6NDB9 673 aaPredicted RBP21.9■■□□□ 1.1
CMTM4-201ENST00000330687 ABLIM1O14639 778 aa21.9■■□□□ 1.1
CMTM4-201ENST00000330687 CCDC22O60826 627 aa21.9■■□□□ 1.1
CMTM4-201ENST00000330687 PGM3O95394 542 aa21.9■■□□□ 1.1
CMTM4-201ENST00000330687 GAS8O95995 478 aa21.9■■□□□ 1.1
CMTM4-201ENST00000330687 NMT1P30419 496 aaKnown RBP21.9■■□□□ 1.1
CMTM4-201ENST00000330687 NPEPPSP55786 919 aa21.9■■□□□ 1.1
CMTM4-201ENST00000330687 MYBPC3Q14896 1274 aa21.9■■□□□ 1.1
CMTM4-201ENST00000330687 TTC7BQ86TV6 843 aa21.9■■□□□ 1.1
CMTM4-201ENST00000330687 SYT2Q8N9I0 419 aaPredicted RBP21.9■■□□□ 1.1
CMTM4-201ENST00000330687 CENPKQ9BS16 269 aa21.9■■□□□ 1.1
CMTM4-201ENST00000330687 PCYOX1Q9UHG3 505 aa21.9■■□□□ 1.1
CMTM4-201ENST00000330687 MED24O75448 989 aa21.89■■□□□ 1.1
CMTM4-201ENST00000330687 CLNKQ7Z7G1 428 aa21.89■■□□□ 1.1
CMTM4-201ENST00000330687 MYCT1Q8N699 235 aa21.89■■□□□ 1.1
CMTM4-201ENST00000330687 ZNF653Q96CK0 615 aa21.89■■□□□ 1.1
CMTM4-201ENST00000330687 DHX36Q9H2U1 1008 aaKnown RBP21.89■■□□□ 1.1
CMTM4-201ENST00000330687 A0A1W2PPM1 405 aa21.89■■□□□ 1.09
CMTM4-201ENST00000330687 H3BRJ5 948 aa21.89■■□□□ 1.09
CMTM4-201ENST00000330687 OR6B1O95007 311 aa21.89■■□□□ 1.09
CMTM4-201ENST00000330687 BAG3O95817 575 aa21.89■■□□□ 1.09
CMTM4-201ENST00000330687 GIT2Q14161 759 aa21.89■■□□□ 1.09
CMTM4-201ENST00000330687 CBWD6Q4V339 395 aa21.89■■□□□ 1.09
CMTM4-201ENST00000330687 CBWD3Q5JTY5 395 aa21.89■■□□□ 1.09
CMTM4-201ENST00000330687 CBWD5Q5RIA9 395 aa21.89■■□□□ 1.09
CMTM4-201ENST00000330687 ENDOVQ8N8Q3 282 aaKnown RBP21.89■■□□□ 1.09
CMTM4-201ENST00000330687 SNF8Q96H20 258 aa21.89■■□□□ 1.09
CMTM4-201ENST00000330687 MPP4Q96JB8 637 aa21.89■■□□□ 1.09
CMTM4-201ENST00000330687 PHF12Q96QT6 1004 aa21.89■■□□□ 1.09
CMTM4-201ENST00000330687 FNBP1Q96RU3 617 aa21.89■■□□□ 1.09
CMTM4-201ENST00000330687 TMEM109Q9BVC6 243 aa21.89■■□□□ 1.09
CMTM4-201ENST00000330687 NUP85Q9BW27 656 aa21.89■■□□□ 1.09
CMTM4-201ENST00000330687 PCIF1Q9H4Z3 704 aa21.89■■□□□ 1.09
CMTM4-201ENST00000330687 PDP2Q9P2J9 529 aa21.89■■□□□ 1.09
CMTM4-201ENST00000330687 DDB1Q16531 1140 aa21.89■■□□□ 1.09
CMTM4-201ENST00000330687 KAZNQ674X7 775 aa21.89■■□□□ 1.09
CMTM4-201ENST00000330687 MAML1Q92585 1016 aa21.89■■□□□ 1.09
CMTM4-201ENST00000330687 RBM15Q96T37 977 aaKnown RBP eCLIP21.89■■□□□ 1.09
CMTM4-201ENST00000330687 USTQ9Y2C2 406 aa21.89■■□□□ 1.09
CMTM4-201ENST00000330687 MYO3BQ8WXR4 1341 aa21.88■■□□□ 1.09
CMTM4-201ENST00000330687 CHMP2AO43633 222 aa21.88■■□□□ 1.09
CMTM4-201ENST00000330687 CYP1A1P04798 512 aaPredicted RBP21.88■■□□□ 1.09
CMTM4-201ENST00000330687 ENO1P06733 434 aaKnown RBP21.88■■□□□ 1.09
CMTM4-201ENST00000330687 IL2RBP14784 551 aa21.88■■□□□ 1.09
CMTM4-201ENST00000330687 PRR16Q569H4 304 aa21.88■■□□□ 1.09
CMTM4-201ENST00000330687 SH3TC2Q8TF17 1288 aa21.88■■□□□ 1.09
CMTM4-201ENST00000330687 GRID1Q9ULK0 1009 aa21.88■■□□□ 1.09
CMTM4-201ENST00000330687 CALCAP01258 141 aa21.88■■□□□ 1.09
CMTM4-201ENST00000330687 MAGEA10P43363 369 aaPredicted RBP21.88■■□□□ 1.09
CMTM4-201ENST00000330687 BTKQ06187 659 aa21.88■■□□□ 1.09
CMTM4-201ENST00000330687 TMEM119Q4V9L6 283 aa21.88■■□□□ 1.09
CMTM4-201ENST00000330687 HAS1Q92839 578 aa21.88■■□□□ 1.09
CMTM4-201ENST00000330687 SPZ1Q9BXG8 430 aa21.88■■□□□ 1.09
CMTM4-201ENST00000330687 UBR1Q8IWV7 1749 aa21.88■■□□□ 1.09
CMTM4-201ENST00000330687 MIF4GDA9UHW6 222 aaKnown RBP21.87■■□□□ 1.09
CMTM4-201ENST00000330687 HSPA6P17066 643 aa21.87■■□□□ 1.09
CMTM4-201ENST00000330687 ADRA1DP25100 572 aa21.87■■□□□ 1.09
CMTM4-201ENST00000330687 STARD13Q9Y3M8 1113 aa21.87■■□□□ 1.09
CMTM4-201ENST00000330687 NUMBLQ9Y6R0 609 aa21.87■■□□□ 1.09
CMTM4-201ENST00000330687 GSC2O15499 205 aa21.87■■□□□ 1.09
CMTM4-201ENST00000330687 IFNB1P01574 187 aa21.87■■□□□ 1.09
CMTM4-201ENST00000330687 EEF2P13639 858 aaKnown RBP21.87■■□□□ 1.09
CMTM4-201ENST00000330687 GPC5P78333 572 aa21.87■■□□□ 1.09
CMTM4-201ENST00000330687 MAP7Q14244 749 aa21.87■■□□□ 1.09
CMTM4-201ENST00000330687 EDRF1Q3B7T1 1238 aa21.87■■□□□ 1.09
CMTM4-201ENST00000330687 IZUMO3Q5VZ72 239 aa21.87■■□□□ 1.09
CMTM4-201ENST00000330687 ANKMY2Q8IV38 441 aa21.87■■□□□ 1.09
CMTM4-201ENST00000330687 RHOT2Q8IXI1 618 aa21.87■■□□□ 1.09
CMTM4-201ENST00000330687 ZNF564Q8TBZ8 553 aaPredicted RBP21.87■■□□□ 1.09
CMTM4-201ENST00000330687 PTPRN2Q92932 1015 aa21.87■■□□□ 1.09
CMTM4-201ENST00000330687 CEP95Q96GE4 821 aa21.87■■□□□ 1.09
CMTM4-201ENST00000330687 AGPAT1Q99943 283 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms