RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 LIG4P49917 911 aa15.63■□□□□ 0.09
TPM3-206ENST00000330188 POLGP54098 1239 aaPredicted RBP15.63■□□□□ 0.09
TPM3-206ENST00000330188 ZNF844Q08AG5 666 aa15.63■□□□□ 0.09
TPM3-206ENST00000330188 FSTL1Q12841 308 aa15.63■□□□□ 0.09
TPM3-206ENST00000330188 PSMD6Q15008 389 aa15.63■□□□□ 0.09
TPM3-206ENST00000330188 CYFIP1Q7L576 1253 aa15.63■□□□□ 0.09
TPM3-206ENST00000330188 UBLCP1Q8WVY7 318 aaPredicted RBP15.63■□□□□ 0.09
TPM3-206ENST00000330188 KIAA1586Q9HCI6 787 aa15.63■□□□□ 0.09
TPM3-206ENST00000330188 ZDHHC18Q9NUE0 388 aa15.63■□□□□ 0.09
TPM3-206ENST00000330188 MAFBQ9Y5Q3 323 aaPredicted RBP15.63■□□□□ 0.09
TPM3-206ENST00000330188 STYXL1Q9Y6J8 313 aa15.63■□□□□ 0.09
TPM3-206ENST00000330188 CALCAP01258 141 aa15.62■□□□□ 0.09
TPM3-206ENST00000330188 OATP04181 439 aa15.62■□□□□ 0.09
TPM3-206ENST00000330188 PYGMP11217 842 aa15.62■□□□□ 0.09
TPM3-206ENST00000330188 KRT5P13647 590 aa15.62■□□□□ 0.09
TPM3-206ENST00000330188 CHRNA3P32297 505 aa15.62■□□□□ 0.09
TPM3-206ENST00000330188 WNT7BP56706 349 aa15.62■□□□□ 0.09
TPM3-206ENST00000330188 STXBP2Q15833 593 aa15.62■□□□□ 0.09
TPM3-206ENST00000330188 LMBRD2Q68DH5 695 aaPredicted RBP15.62■□□□□ 0.09
TPM3-206ENST00000330188 DNERQ8NFT8 737 aa15.62■□□□□ 0.09
TPM3-206ENST00000330188 ASAP3Q8TDY4 903 aa15.62■□□□□ 0.09
TPM3-206ENST00000330188 KCNN1Q92952 543 aa15.62■□□□□ 0.09
TPM3-206ENST00000330188 TMEM143Q96AN5 459 aa15.62■□□□□ 0.09
TPM3-206ENST00000330188 C18orf8Q96DM3 657 aa15.62■□□□□ 0.09
TPM3-206ENST00000330188 FMO2Q99518 471 aa15.62■□□□□ 0.09
TPM3-206ENST00000330188 TXLNGYQ9BZA5 131 aa15.62■□□□□ 0.09
TPM3-206ENST00000330188 DHX33Q9H6R0 707 aaKnown RBP15.62■□□□□ 0.09
TPM3-206ENST00000330188 ZNF302Q9NR11 478 aa15.62■□□□□ 0.09
TPM3-206ENST00000330188 C1orf112Q9NSG2 853 aa15.62■□□□□ 0.09
TPM3-206ENST00000330188 PCDHA3Q9Y5H8 950 aa15.62■□□□□ 0.09
TPM3-206ENST00000330188 PTPRFP10586 1907 aa15.62■□□□□ 0.09
TPM3-206ENST00000330188 GOLGA6L10A6NI86 522 aa15.62■□□□□ 0.09
TPM3-206ENST00000330188 MYO1FO00160 1098 aa15.62■□□□□ 0.09
TPM3-206ENST00000330188 SPOPO43791 374 aa15.62■□□□□ 0.09
TPM3-206ENST00000330188 PPFIA2O75334 1257 aa15.62■□□□□ 0.09
TPM3-206ENST00000330188 MYZAPP0CAP1 466 aa15.62■□□□□ 0.09
TPM3-206ENST00000330188 NLRP11P59045 1033 aaKnown RBP15.62■□□□□ 0.09
TPM3-206ENST00000330188 CNTN2Q02246 1040 aa15.62■□□□□ 0.09
TPM3-206ENST00000330188 DHX9Q08211 1270 aaKnown RBP15.62■□□□□ 0.09
TPM3-206ENST00000330188 SH3D19Q5HYK7 790 aa15.62■□□□□ 0.09
TPM3-206ENST00000330188 BCAS4Q8TDM0 211 aa15.62■□□□□ 0.09
TPM3-206ENST00000330188 PSPC1Q8WXF1 523 aaKnown RBP15.62■□□□□ 0.09
TPM3-206ENST00000330188 HAPLN2Q9GZV7 340 aa15.62■□□□□ 0.09
TPM3-206ENST00000330188 CNOT8Q9UFF9 292 aaKnown RBP15.62■□□□□ 0.09
TPM3-206ENST00000330188 PCYOX1Q9UHG3 505 aa15.62■□□□□ 0.09
TPM3-206ENST00000330188 KCNG1Q9UIX4 513 aa15.62■□□□□ 0.09
TPM3-206ENST00000330188 KIAA0391O15091 583 aaKnown RBP15.61■□□□□ 0.09
TPM3-206ENST00000330188 C4BPAP04003 597 aaKnown RBP15.61■□□□□ 0.09
TPM3-206ENST00000330188 UNGP13051 313 aaPredicted RBP15.61■□□□□ 0.09
TPM3-206ENST00000330188 GLRA2P23416 452 aa15.61■□□□□ 0.09
TPM3-206ENST00000330188 DRG2P55039 364 aaKnown RBP15.61■□□□□ 0.09
TPM3-206ENST00000330188 STRN3Q13033 797 aa15.61■□□□□ 0.09
TPM3-206ENST00000330188 ZACNQ401N2 412 aa15.61■□□□□ 0.09
TPM3-206ENST00000330188 TTC27Q6P3X3 843 aa15.61■□□□□ 0.09
TPM3-206ENST00000330188 CRELD2Q6UXH1 353 aaPredicted RBP15.61■□□□□ 0.09
TPM3-206ENST00000330188 CHST13Q8NET6 341 aa15.61■□□□□ 0.09
TPM3-206ENST00000330188 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.61■□□□□ 0.09
TPM3-206ENST00000330188 FAM81BQ96LP2 452 aa15.61■□□□□ 0.09
TPM3-206ENST00000330188 CEP89Q96ST8 783 aa15.61■□□□□ 0.09
TPM3-206ENST00000330188 PORCNQ9H237 461 aa15.61■□□□□ 0.09
TPM3-206ENST00000330188 RASAL2Q9UJF2 1139 aa15.61■□□□□ 0.09
TPM3-206ENST00000330188 AGO2Q9UKV8 859 aaKnown RBP15.61■□□□□ 0.09
TPM3-206ENST00000330188 PPP2R3BQ9Y5P8 575 aa15.61■□□□□ 0.09
TPM3-206ENST00000330188 A0A0G2JMZ2 1700 aa15.61■□□□□ 0.09
TPM3-206ENST00000330188 MYO1CO00159 1063 aa15.61■□□□□ 0.09
TPM3-206ENST00000330188 PIGRP01833 764 aa15.61■□□□□ 0.09
TPM3-206ENST00000330188 HLA-DRAP01903 254 aa15.61■□□□□ 0.09
TPM3-206ENST00000330188 POLR2AP24928 1970 aaKnown RBP15.61■□□□□ 0.09
TPM3-206ENST00000330188 ARL2P36404 184 aa15.61■□□□□ 0.09
TPM3-206ENST00000330188 NAMPTP43490 491 aa15.61■□□□□ 0.09
TPM3-206ENST00000330188 PTPRJQ12913 1337 aa15.61■□□□□ 0.09
TPM3-206ENST00000330188 PRKG1Q13976 671 aa15.61■□□□□ 0.09
TPM3-206ENST00000330188 CYP1B1Q16678 543 aa15.61■□□□□ 0.09
TPM3-206ENST00000330188 SPDYCQ5MJ68 293 aa15.61■□□□□ 0.09
TPM3-206ENST00000330188 TDRD10Q5VZ19 366 aaKnown RBP15.61■□□□□ 0.09
TPM3-206ENST00000330188 SLC13A5Q86YT5 568 aaPredicted RBP15.61■□□□□ 0.09
TPM3-206ENST00000330188 EFCAB13Q8IY85 973 aa15.61■□□□□ 0.09
TPM3-206ENST00000330188 MAGOHBQ96A72 148 aaKnown RBP15.61■□□□□ 0.09
TPM3-206ENST00000330188 FNBP1Q96RU3 617 aa15.61■□□□□ 0.09
TPM3-206ENST00000330188 RABEP2Q9H5N1 569 aa15.61■□□□□ 0.09
TPM3-206ENST00000330188 GPRC5DQ9NZD1 345 aa15.61■□□□□ 0.09
TPM3-206ENST00000330188 IGKV6D-21A0A0A0MT36 114 aa15.6■□□□□ 0.09
TPM3-206ENST00000330188 TCRBV7S2A1N4TA0A589 114 aa15.6■□□□□ 0.09
TPM3-206ENST00000330188 TNNI1P19237 187 aa15.6■□□□□ 0.09
TPM3-206ENST00000330188 CCT5P48643 541 aa15.6■□□□□ 0.09
TPM3-206ENST00000330188 ACOT2P49753 483 aa15.6■□□□□ 0.09
TPM3-206ENST00000330188 ALDH5A1P51649 535 aaPredicted RBP15.6■□□□□ 0.09
TPM3-206ENST00000330188 HIRAP54198 1017 aaPredicted RBP15.6■□□□□ 0.09
TPM3-206ENST00000330188 SIX1Q15475 284 aaPredicted RBP15.6■□□□□ 0.09
TPM3-206ENST00000330188 ZDHHC24Q6UX98 284 aa15.6■□□□□ 0.09
TPM3-206ENST00000330188 SEPT14Q6ZU15 432 aa15.6■□□□□ 0.09
TPM3-206ENST00000330188 ZBTB45Q96K62 511 aaPredicted RBP15.6■□□□□ 0.09
TPM3-206ENST00000330188 SNX24Q9Y343 169 aa15.6■□□□□ 0.09
TPM3-206ENST00000330188 LRRIQ4A6NIV6 560 aa15.59■□□□□ 0.09
TPM3-206ENST00000330188 PEX10O60683 326 aa15.59■□□□□ 0.09
TPM3-206ENST00000330188 VNN1O95497 513 aa15.59■□□□□ 0.09
TPM3-206ENST00000330188 PIK3CAP42336 1068 aa15.59■□□□□ 0.09
TPM3-206ENST00000330188 RWDD2BP57060 319 aa15.59■□□□□ 0.09
TPM3-206ENST00000330188 GUCY1A3Q02108 690 aa15.59■□□□□ 0.09
TPM3-206ENST00000330188 BIRC3Q13489 604 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms