RNA–Protein interactions for RNA: ENST00000329291.5

PGBD2-201, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PGBD2, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-201ENST00000329291 OR5B17Q8NGF7 314 aa17.09■□□□□ 0.33
PGBD2-201ENST00000329291 SUCLA2Q9P2R7 463 aaPredicted RBP17.09■□□□□ 0.33
PGBD2-201ENST00000329291 TRPC6Q9Y210 931 aa17.09■□□□□ 0.33
PGBD2-201ENST00000329291 FAM110CQ1W6H9 321 aa17.08■□□□□ 0.33
PGBD2-201ENST00000329291 CDCA2Q69YH5 1023 aaPredicted RBP17.08■□□□□ 0.33
PGBD2-201ENST00000329291 CHADLQ6NUI6 762 aa17.08■□□□□ 0.33
PGBD2-201ENST00000329291 PEX26Q7Z412 305 aa17.08■□□□□ 0.33
PGBD2-201ENST00000329291 RHPN2Q8IUC4 686 aa17.08■□□□□ 0.33
PGBD2-201ENST00000329291 GSPT2Q8IYD1 628 aaKnown RBP17.08■□□□□ 0.33
PGBD2-201ENST00000329291 METTL13Q8N6R0 699 aa17.08■□□□□ 0.33
PGBD2-201ENST00000329291 ACO2Q99798 780 aaKnown RBP17.08■□□□□ 0.33
PGBD2-201ENST00000329291 SMARCAD1Q9H4L7 1026 aa17.08■□□□□ 0.33
PGBD2-201ENST00000329291 APOBEC3GQ9HC16 384 aaKnown RBP17.08■□□□□ 0.33
PGBD2-201ENST00000329291 VTA1Q9NP79 307 aa17.08■□□□□ 0.33
PGBD2-201ENST00000329291 PLXNB2O15031 1838 aa17.08■□□□□ 0.32
PGBD2-201ENST00000329291 CLCN3P51790 818 aa17.08■□□□□ 0.32
PGBD2-201ENST00000329291 CCNI2Q6ZMN8 369 aaPredicted RBP17.08■□□□□ 0.32
PGBD2-201ENST00000329291 GPR142Q7Z601 462 aa17.08■□□□□ 0.32
PGBD2-201ENST00000329291 ZNF467Q7Z7K2 595 aaPredicted RBP17.08■□□□□ 0.32
PGBD2-201ENST00000329291 DPP9Q86TI2 863 aa17.08■□□□□ 0.32
PGBD2-201ENST00000329291 KATNBL1Q9H079 304 aa17.08■□□□□ 0.32
PGBD2-201ENST00000329291 SIP14410 1827 aa17.07■□□□□ 0.32
PGBD2-201ENST00000329291 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.07■□□□□ 0.32
PGBD2-201ENST00000329291 ABLIM1O14639 778 aa17.07■□□□□ 0.32
PGBD2-201ENST00000329291 KIAA0391O15091 583 aaKnown RBP17.07■□□□□ 0.32
PGBD2-201ENST00000329291 CLDN3O15551 220 aa17.07■□□□□ 0.32
PGBD2-201ENST00000329291 SNAI1O95863 264 aaPredicted RBP17.07■□□□□ 0.32
PGBD2-201ENST00000329291 ITGBL1O95965 494 aaPredicted RBP17.07■□□□□ 0.32
PGBD2-201ENST00000329291 ADCYAP1R1P41586 468 aa17.07■□□□□ 0.32
PGBD2-201ENST00000329291 EFNA5P52803 228 aa17.07■□□□□ 0.32
PGBD2-201ENST00000329291 EFCAB12Q6NXP0 572 aa17.07■□□□□ 0.32
PGBD2-201ENST00000329291 EXOC8Q8IYI6 725 aa17.07■□□□□ 0.32
PGBD2-201ENST00000329291 LMBR1Q8WVP7 490 aa17.07■□□□□ 0.32
PGBD2-201ENST00000329291 UBXN6Q9BZV1 441 aa17.07■□□□□ 0.32
PGBD2-201ENST00000329291 MINDY3Q9H8M7 445 aa17.07■□□□□ 0.32
PGBD2-201ENST00000329291 RNF14Q9UBS8 474 aa17.07■□□□□ 0.32
PGBD2-201ENST00000329291 B4GALT5O43286 388 aa17.06■□□□□ 0.32
PGBD2-201ENST00000329291 ATMINO43313 823 aaPredicted RBP17.06■□□□□ 0.32
PGBD2-201ENST00000329291 RTN2O75298 545 aa17.06■□□□□ 0.32
PGBD2-201ENST00000329291 ERLIN1O75477 346 aa17.06■□□□□ 0.32
PGBD2-201ENST00000329291 TUBBP07437 444 aa17.06■□□□□ 0.32
PGBD2-201ENST00000329291 MAPK4P31152 587 aa17.06■□□□□ 0.32
PGBD2-201ENST00000329291 SLC26A2P50443 739 aa17.06■□□□□ 0.32
PGBD2-201ENST00000329291 IGBP1P78318 339 aa17.06■□□□□ 0.32
PGBD2-201ENST00000329291 GCNT1Q02742 428 aa17.06■□□□□ 0.32
PGBD2-201ENST00000329291 BIRC3Q13489 604 aa17.06■□□□□ 0.32
PGBD2-201ENST00000329291 MXD4Q14582 209 aaPredicted RBP17.06■□□□□ 0.32
PGBD2-201ENST00000329291 ZPBP2Q6X784 338 aa17.06■□□□□ 0.32
PGBD2-201ENST00000329291 PLEKHH3Q7Z736 793 aa17.06■□□□□ 0.32
PGBD2-201ENST00000329291 TCP11Q8WWU5 503 aa17.06■□□□□ 0.32
PGBD2-201ENST00000329291 TAF4BQ92750 862 aa17.06■□□□□ 0.32
PGBD2-201ENST00000329291 HES6Q96HZ4 224 aa17.06■□□□□ 0.32
PGBD2-201ENST00000329291 PLEKHA4Q9H4M7 779 aa17.06■□□□□ 0.32
PGBD2-201ENST00000329291 UMODL1Q5DID0 1318 aa17.06■□□□□ 0.32
PGBD2-201ENST00000329291 CEP104O60308 925 aa17.06■□□□□ 0.32
PGBD2-201ENST00000329291 LDHAP00338 332 aaKnown RBP17.06■□□□□ 0.32
PGBD2-201ENST00000329291 PRKCBP05771 671 aa17.06■□□□□ 0.32
PGBD2-201ENST00000329291 IQCF3P0C7M6 154 aa17.06■□□□□ 0.32
PGBD2-201ENST00000329291 KRT5P13647 590 aa17.06■□□□□ 0.32
PGBD2-201ENST00000329291 CDR2Q01850 454 aa17.06■□□□□ 0.32
PGBD2-201ENST00000329291 GRB14Q14449 540 aa17.06■□□□□ 0.32
PGBD2-201ENST00000329291 CDR2LQ86X02 465 aaPredicted RBP17.06■□□□□ 0.32
PGBD2-201ENST00000329291 USP38Q8NB14 1042 aa17.06■□□□□ 0.32
PGBD2-201ENST00000329291 AFG1LQ8WV93 481 aa17.06■□□□□ 0.32
PGBD2-201ENST00000329291 GDAP1L1Q96MZ0 367 aa17.06■□□□□ 0.32
PGBD2-201ENST00000329291 TCHPQ9BT92 498 aa17.06■□□□□ 0.32
PGBD2-201ENST00000329291 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.06■□□□□ 0.32
PGBD2-201ENST00000329291 HBP1O60381 514 aa17.05■□□□□ 0.32
PGBD2-201ENST00000329291 ZC3H11AO75152 810 aaKnown RBP eCLIP17.05■□□□□ 0.32
PGBD2-201ENST00000329291 CSDE1O75534 798 aaKnown RBP17.05■□□□□ 0.32
PGBD2-201ENST00000329291 TOM1L1O75674 476 aa17.05■□□□□ 0.32
PGBD2-201ENST00000329291 ECM2O94769 699 aaPredicted RBP17.05■□□□□ 0.32
PGBD2-201ENST00000329291 LGALS2P05162 132 aa17.05■□□□□ 0.32
PGBD2-201ENST00000329291 INSRRP14616 1297 aa17.05■□□□□ 0.32
PGBD2-201ENST00000329291 PIK3CAP42336 1068 aa17.05■□□□□ 0.32
PGBD2-201ENST00000329291 ZNF157P51786 506 aaPredicted RBP17.05■□□□□ 0.32
PGBD2-201ENST00000329291 LAMC2Q13753 1193 aa17.05■□□□□ 0.32
PGBD2-201ENST00000329291 KCTD19Q17RG1 926 aaPredicted RBP17.05■□□□□ 0.32
PGBD2-201ENST00000329291 NLRP4Q96MN2 994 aa17.05■□□□□ 0.32
PGBD2-201ENST00000329291 CGRRF1Q99675 332 aa17.05■□□□□ 0.32
PGBD2-201ENST00000329291 MRPL4Q9BYD3 311 aaKnown RBP17.05■□□□□ 0.32
PGBD2-201ENST00000329291 TMEM59LQ9UK28 342 aa17.05■□□□□ 0.32
PGBD2-201ENST00000329291 PLXNA1Q9UIW2 1896 aa17.05■□□□□ 0.32
PGBD2-201ENST00000329291 RBM47A0AV96 593 aaKnown RBP17.05■□□□□ 0.32
PGBD2-201ENST00000329291 DCAF8L1A6NGE4 600 aa17.05■□□□□ 0.32
PGBD2-201ENST00000329291 CES2O00748 559 aa17.05■□□□□ 0.32
PGBD2-201ENST00000329291 DDX3YO15523 660 aaKnown RBP17.05■□□□□ 0.32
PGBD2-201ENST00000329291 GAS2O43903 313 aaKnown RBP17.05■□□□□ 0.32
PGBD2-201ENST00000329291 C22orf31O95567 290 aa17.05■□□□□ 0.32
PGBD2-201ENST00000329291 CST3P01034 146 aaPredicted RBP17.05■□□□□ 0.32
PGBD2-201ENST00000329291 GZMAP12544 262 aa17.05■□□□□ 0.32
PGBD2-201ENST00000329291 ACO1P21399 889 aaKnown RBP17.05■□□□□ 0.32
PGBD2-201ENST00000329291 GPC5P78333 572 aa17.05■□□□□ 0.32
PGBD2-201ENST00000329291 HDXQ7Z353 690 aa17.05■□□□□ 0.32
PGBD2-201ENST00000329291 RASAL3Q86YV0 1011 aa17.05■□□□□ 0.32
PGBD2-201ENST00000329291 SYCE1Q8N0S2 351 aa17.05■□□□□ 0.32
PGBD2-201ENST00000329291 PBKQ96KB5 322 aa17.05■□□□□ 0.32
PGBD2-201ENST00000329291 PTPRHQ9HD43 1115 aa17.05■□□□□ 0.32
PGBD2-201ENST00000329291 C1orf112Q9NSG2 853 aa17.05■□□□□ 0.32
PGBD2-201ENST00000329291 ERAP1Q9NZ08 941 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms