RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 PRKAB2O43741 272 aa7.52□□□□□ -1.21
CSTF3-201ENST00000323959 MBD4O95243 580 aa7.52□□□□□ -1.21
CSTF3-201ENST00000323959 TLE1Q04724 770 aa7.52□□□□□ -1.21
CSTF3-201ENST00000323959 ARHGAP40Q5TG30 622 aa7.52□□□□□ -1.21
CSTF3-201ENST00000323959 FBXL16Q8N461 479 aa7.52□□□□□ -1.21
CSTF3-201ENST00000323959 URGCPQ8TCY9 931 aa7.52□□□□□ -1.21
CSTF3-201ENST00000323959 MCRS1Q96EZ8 462 aa7.52□□□□□ -1.21
CSTF3-201ENST00000323959 SPACA7Q96KW9 195 aa7.52□□□□□ -1.21
CSTF3-201ENST00000323959 HHIPQ96QV1 700 aa7.52□□□□□ -1.21
CSTF3-201ENST00000323959 SENP7Q9BQF6 1050 aa7.52□□□□□ -1.21
CSTF3-201ENST00000323959 REPIN1Q9BWE0 567 aaKnown RBP7.52□□□□□ -1.21
CSTF3-201ENST00000323959 TRAIPQ9BWF2 469 aa7.52□□□□□ -1.21
CSTF3-201ENST00000323959 DPH1Q9BZG8 443 aa7.52□□□□□ -1.21
CSTF3-201ENST00000323959 IL1RAPL2Q9NP60 686 aa7.52□□□□□ -1.21
CSTF3-201ENST00000323959 TMPRSS4Q9NRS4 437 aa7.52□□□□□ -1.21
CSTF3-201ENST00000323959 DACT1Q9NYF0 836 aa7.52□□□□□ -1.21
CSTF3-201ENST00000323959 MRPL11Q9Y3B7 192 aaKnown RBP7.52□□□□□ -1.21
CSTF3-201ENST00000323959 DNHD1Q96M86 4753 aa7.52□□□□□ -1.21
CSTF3-201ENST00000323959 PLK4O00444 970 aa7.52□□□□□ -1.21
CSTF3-201ENST00000323959 SORBS3O60504 671 aa7.52□□□□□ -1.21
CSTF3-201ENST00000323959 LRG1P02750 347 aa7.52□□□□□ -1.21
CSTF3-201ENST00000323959 ZFYP08048 801 aaPredicted RBP7.52□□□□□ -1.21
CSTF3-201ENST00000323959 EML3Q32P44 896 aa7.52□□□□□ -1.21
CSTF3-201ENST00000323959 HIST2H2BCQ6DN03 193 aa7.52□□□□□ -1.21
CSTF3-201ENST00000323959 CLEC17AQ6ZS10 378 aa7.52□□□□□ -1.21
CSTF3-201ENST00000323959 RASSF3Q86WH2 238 aa7.52□□□□□ -1.21
CSTF3-201ENST00000323959 ERICH1Q86X53 443 aa7.52□□□□□ -1.21
CSTF3-201ENST00000323959 YAF2Q8IY57 180 aa7.52□□□□□ -1.21
CSTF3-201ENST00000323959 KBTBD3Q8NAB2 608 aa7.52□□□□□ -1.21
CSTF3-201ENST00000323959 OLIG1Q8TAK6 271 aa7.52□□□□□ -1.21
CSTF3-201ENST00000323959 SMARCD2Q92925 531 aa7.52□□□□□ -1.21
CSTF3-201ENST00000323959 CNOT6LQ96LI5 555 aaKnown RBP7.52□□□□□ -1.21
CSTF3-201ENST00000323959 ASB16Q96NS5 453 aa7.52□□□□□ -1.21
CSTF3-201ENST00000323959 LGMNQ99538 433 aa7.52□□□□□ -1.21
CSTF3-201ENST00000323959 FAN1Q9Y2M0 1017 aa7.52□□□□□ -1.21
CSTF3-201ENST00000323959 PCDHA1Q9Y5I3 950 aa7.52□□□□□ -1.21
CSTF3-201ENST00000323959 AK5Q9Y6K8 562 aa7.52□□□□□ -1.21
CSTF3-201ENST00000323959 SPATA31C2B4DYI2 1134 aa7.51□□□□□ -1.21
CSTF3-201ENST00000323959 ZNF197O14709 1029 aa7.51□□□□□ -1.21
CSTF3-201ENST00000323959 HOXC13P31276 330 aa7.51□□□□□ -1.21
CSTF3-201ENST00000323959 MFAP1P55081 439 aaKnown RBP7.51□□□□□ -1.21
CSTF3-201ENST00000323959 OXCT1P55809 520 aa7.51□□□□□ -1.21
CSTF3-201ENST00000323959 PCBP4P57723 403 aaKnown RBP7.51□□□□□ -1.21
CSTF3-201ENST00000323959 TMEM62Q0P6H9 643 aa7.51□□□□□ -1.21
CSTF3-201ENST00000323959 FBXO43Q4G163 708 aa7.51□□□□□ -1.21
CSTF3-201ENST00000323959 CCDC26Q8TAB7 109 aa7.51□□□□□ -1.21
CSTF3-201ENST00000323959 CHST7Q9NS84 486 aa7.51□□□□□ -1.21
CSTF3-201ENST00000323959 COL1A2P08123 1366 aa7.51□□□□□ -1.21
CSTF3-201ENST00000323959 USP9YO00507 2555 aaPredicted RBP7.51□□□□□ -1.21
CSTF3-201ENST00000323959 WDR27A2RRH5 827 aa7.51□□□□□ -1.21
CSTF3-201ENST00000323959 FIBPO43427 364 aa7.51□□□□□ -1.21
CSTF3-201ENST00000323959 TSPY3P0CV98 308 aa7.51□□□□□ -1.21
CSTF3-201ENST00000323959 TSPY8P0CW00 308 aa7.51□□□□□ -1.21
CSTF3-201ENST00000323959 BCKDHBP21953 392 aa7.51□□□□□ -1.21
CSTF3-201ENST00000323959 NOVP48745 357 aa7.51□□□□□ -1.21
CSTF3-201ENST00000323959 NT5C2P49902 561 aa7.51□□□□□ -1.21
CSTF3-201ENST00000323959 HSD17B4P51659 736 aa7.51□□□□□ -1.21
CSTF3-201ENST00000323959 SEMG2Q02383 582 aa7.51□□□□□ -1.21
CSTF3-201ENST00000323959 PON2Q15165 354 aa7.51□□□□□ -1.21
CSTF3-201ENST00000323959 FAM78AQ5JUQ0 283 aa7.51□□□□□ -1.21
CSTF3-201ENST00000323959 PALB2Q86YC2 1186 aa7.51□□□□□ -1.21
CSTF3-201ENST00000323959 HIC2Q96JB3 615 aa7.51□□□□□ -1.21
CSTF3-201ENST00000323959 KANSL3Q9P2N6 904 aa7.51□□□□□ -1.21
CSTF3-201ENST00000323959 SSUH2Q9Y2M2 353 aa7.51□□□□□ -1.21
CSTF3-201ENST00000323959 CACNA1EQ15878 2313 aa7.5□□□□□ -1.21
CSTF3-201ENST00000323959 ALDH2P05091 517 aa7.5□□□□□ -1.21
CSTF3-201ENST00000323959 SPATA31D3P0C874 917 aa7.5□□□□□ -1.21
CSTF3-201ENST00000323959 PDIA4P13667 645 aaKnown RBP7.5□□□□□ -1.21
CSTF3-201ENST00000323959 INSRRP14616 1297 aa7.5□□□□□ -1.21
CSTF3-201ENST00000323959 NBR1Q14596 966 aa7.5□□□□□ -1.21
CSTF3-201ENST00000323959 SPATA31D4Q6ZUB0 917 aa7.5□□□□□ -1.21
CSTF3-201ENST00000323959 FLRT2O43155 660 aa7.5□□□□□ -1.21
CSTF3-201ENST00000323959 ATXN1LP0C7T5 689 aaKnown RBP7.5□□□□□ -1.21
CSTF3-201ENST00000323959 MYCLP12524 364 aaPredicted RBP7.5□□□□□ -1.21
CSTF3-201ENST00000323959 CEBPBP17676 345 aa7.5□□□□□ -1.21
CSTF3-201ENST00000323959 DCTP40126 519 aa7.5□□□□□ -1.21
CSTF3-201ENST00000323959 DGKEP52429 567 aa7.5□□□□□ -1.21
CSTF3-201ENST00000323959 GRSF1Q12849 480 aaKnown RBP eCLIP7.5□□□□□ -1.21
CSTF3-201ENST00000323959 NECTIN1Q15223 517 aa7.5□□□□□ -1.21
CSTF3-201ENST00000323959 TMEM196Q5HYL7 178 aa7.5□□□□□ -1.21
CSTF3-201ENST00000323959 PKN3Q6P5Z2 889 aa7.5□□□□□ -1.21
CSTF3-201ENST00000323959 HAUS6Q7Z4H7 955 aa7.5□□□□□ -1.21
CSTF3-201ENST00000323959 ING5Q8WYH8 240 aa7.5□□□□□ -1.21
CSTF3-201ENST00000323959 ZNF578Q96N58 590 aaPredicted RBP7.5□□□□□ -1.21
CSTF3-201ENST00000323959 DSCC1Q9BVC3 393 aa7.5□□□□□ -1.21
CSTF3-201ENST00000323959 ADAMTS9Q9P2N4 1935 aa7.5□□□□□ -1.21
CSTF3-201ENST00000323959 DNMT3BQ9UBC3 853 aaKnown RBP7.5□□□□□ -1.21
CSTF3-201ENST00000323959 PCDHGA1Q9Y5H4 931 aa7.5□□□□□ -1.21
CSTF3-201ENST00000323959 SLC4A4Q9Y6R1 1079 aa7.5□□□□□ -1.21
CSTF3-201ENST00000323959 AHCTF1Q8WYP5 2266 aa7.5□□□□□ -1.21
CSTF3-201ENST00000323959 CCL16O15467 120 aa7.49□□□□□ -1.21
CSTF3-201ENST00000323959 TNFSF14O43557 240 aa7.49□□□□□ -1.21
CSTF3-201ENST00000323959 TCF7P36402 384 aaPredicted RBP7.49□□□□□ -1.21
CSTF3-201ENST00000323959 CUL4AQ13619 759 aa7.49□□□□□ -1.21
CSTF3-201ENST00000323959 PGM5Q15124 567 aa7.49□□□□□ -1.21
CSTF3-201ENST00000323959 ARHGAP29Q52LW3 1261 aa7.49□□□□□ -1.21
CSTF3-201ENST00000323959 ZMYM1Q5SVZ6 1142 aa7.49□□□□□ -1.21
CSTF3-201ENST00000323959 MTHFD1LQ6UB35 978 aa7.49□□□□□ -1.21
CSTF3-201ENST00000323959 STOX1Q6ZVD7 989 aa7.49□□□□□ -1.21
CSTF3-201ENST00000323959 CYFIP1Q7L576 1253 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms