RNA–Protein interactions for RNA: ENST00000319518.12

CPNE7-202, Transcript of copine 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE7, Length 2,409 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-202ENST00000319518 AAASQ9NRG9 546 aa22.22■■□□□ 1.15
CPNE7-202ENST00000319518 MTRF1LQ9UGC7 380 aaKnown RBP22.22■■□□□ 1.15
CPNE7-202ENST00000319518 DBR1Q9UK59 544 aaKnown RBP22.22■■□□□ 1.15
CPNE7-202ENST00000319518 UBIAD1Q9Y5Z9 338 aa22.22■■□□□ 1.15
CPNE7-202ENST00000319518 LOXHD1Q8IVV2 1947 aa22.22■■□□□ 1.15
CPNE7-202ENST00000319518 CHUKO15111 745 aa22.22■■□□□ 1.15
CPNE7-202ENST00000319518 RARGP13631 454 aa22.22■■□□□ 1.15
CPNE7-202ENST00000319518 PLS3P13797 630 aa22.22■■□□□ 1.15
CPNE7-202ENST00000319518 PTPRAP18433 802 aa22.22■■□□□ 1.15
CPNE7-202ENST00000319518 BACE1P56817 501 aa22.22■■□□□ 1.15
CPNE7-202ENST00000319518 PGM5Q15124 567 aa22.22■■□□□ 1.15
CPNE7-202ENST00000319518 CCDC38Q502W7 563 aa22.22■■□□□ 1.15
CPNE7-202ENST00000319518 SCYL3Q8IZE3 742 aa22.22■■□□□ 1.15
CPNE7-202ENST00000319518 PPM1KQ8N3J5 372 aa22.22■■□□□ 1.15
CPNE7-202ENST00000319518 NCAPGQ9BPX3 1015 aa22.22■■□□□ 1.15
CPNE7-202ENST00000319518 GPRC5CQ9NQ84 441 aa22.22■■□□□ 1.15
CPNE7-202ENST00000319518 USP20Q9Y2K6 914 aa22.22■■□□□ 1.15
CPNE7-202ENST00000319518 CCT8L1PA6NM43 557 aa22.21■■□□□ 1.15
CPNE7-202ENST00000319518 CDR1P51861 262 aa22.21■■□□□ 1.15
CPNE7-202ENST00000319518 MAP2K1Q02750 393 aaPredicted RBP22.21■■□□□ 1.15
CPNE7-202ENST00000319518 PCNX4Q63HM2 1172 aa22.21■■□□□ 1.15
CPNE7-202ENST00000319518 PSPC1Q8WXF1 523 aaKnown RBP22.21■■□□□ 1.15
CPNE7-202ENST00000319518 SHC3Q92529 594 aa22.21■■□□□ 1.15
CPNE7-202ENST00000319518 SGSM3Q96HU1 749 aa22.21■■□□□ 1.15
CPNE7-202ENST00000319518 RMDN3Q96TC7 470 aa22.21■■□□□ 1.15
CPNE7-202ENST00000319518 DDX23Q9BUQ8 820 aaKnown RBP22.21■■□□□ 1.15
CPNE7-202ENST00000319518 INTS9Q9NV88 658 aaKnown RBP22.21■■□□□ 1.15
CPNE7-202ENST00000319518 PARP2Q9UGN5 583 aa22.21■■□□□ 1.15
CPNE7-202ENST00000319518 ASAP2O43150 1006 aa22.21■■□□□ 1.15
CPNE7-202ENST00000319518 SPOPO43791 374 aa22.21■■□□□ 1.15
CPNE7-202ENST00000319518 ZBED4O75132 1171 aa22.21■■□□□ 1.15
CPNE7-202ENST00000319518 MAPTP10636 758 aaKnown RBP22.21■■□□□ 1.15
CPNE7-202ENST00000319518 GHRP10912 638 aa22.21■■□□□ 1.15
CPNE7-202ENST00000319518 ADSSP30520 456 aa22.21■■□□□ 1.15
CPNE7-202ENST00000319518 GTF2BQ00403 316 aa22.21■■□□□ 1.15
CPNE7-202ENST00000319518 RNF207Q6ZRF8 634 aa22.21■■□□□ 1.15
CPNE7-202ENST00000319518 HAUS6Q7Z4H7 955 aa22.21■■□□□ 1.15
CPNE7-202ENST00000319518 CBWD2Q8IUF1 395 aa22.21■■□□□ 1.15
CPNE7-202ENST00000319518 PARP9Q8IXQ6 854 aa22.21■■□□□ 1.15
CPNE7-202ENST00000319518 VTI1AQ96AJ9 217 aa22.21■■□□□ 1.15
CPNE7-202ENST00000319518 CCDC134Q9H6E4 229 aa22.21■■□□□ 1.15
CPNE7-202ENST00000319518 CD2APQ9Y5K6 639 aa22.21■■□□□ 1.15
CPNE7-202ENST00000319518 P4HBP07237 508 aaKnown RBP22.2■■□□□ 1.14
CPNE7-202ENST00000319518 GBP1P32455 592 aa22.2■■□□□ 1.14
CPNE7-202ENST00000319518 UGCGQ16739 394 aa22.2■■□□□ 1.14
CPNE7-202ENST00000319518 C12orf50Q8NA57 414 aaPredicted RBP22.2■■□□□ 1.14
CPNE7-202ENST00000319518 ZNF280CQ8ND82 737 aa22.2■■□□□ 1.14
CPNE7-202ENST00000319518 P3H4Q92791 437 aa22.2■■□□□ 1.14
CPNE7-202ENST00000319518 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.2■■□□□ 1.14
CPNE7-202ENST00000319518 RASGRF2O14827 1237 aa22.2■■□□□ 1.14
CPNE7-202ENST00000319518 CYP11B1P15538 503 aa22.2■■□□□ 1.14
CPNE7-202ENST00000319518 BAATQ14032 418 aaPredicted RBP22.2■■□□□ 1.14
CPNE7-202ENST00000319518 CCDC91Q7Z6B0 441 aa22.2■■□□□ 1.14
CPNE7-202ENST00000319518 EXOC3L1Q86VI1 746 aa22.2■■□□□ 1.14
CPNE7-202ENST00000319518 HELQQ8TDG4 1101 aa22.2■■□□□ 1.14
CPNE7-202ENST00000319518 MORC4Q8TE76 937 aa22.2■■□□□ 1.14
CPNE7-202ENST00000319518 ZNF653Q96CK0 615 aa22.2■■□□□ 1.14
CPNE7-202ENST00000319518 PICK1Q9NRD5 415 aa22.2■■□□□ 1.14
CPNE7-202ENST00000319518 GGA3Q9NZ52 723 aa22.2■■□□□ 1.14
CPNE7-202ENST00000319518 TPX2Q9ULW0 747 aaKnown RBP22.2■■□□□ 1.14
CPNE7-202ENST00000319518 LTBP3Q9NS15 1303 aa22.2■■□□□ 1.14
CPNE7-202ENST00000319518 TESPA1A2RU30 521 aaPredicted RBP22.19■■□□□ 1.14
CPNE7-202ENST00000319518 PMM2O15305 246 aa22.19■■□□□ 1.14
CPNE7-202ENST00000319518 SLC16A4O15374 487 aa22.19■■□□□ 1.14
CPNE7-202ENST00000319518 CLDN3O15551 220 aa22.19■■□□□ 1.14
CPNE7-202ENST00000319518 GRIN3BO60391 1043 aa22.19■■□□□ 1.14
CPNE7-202ENST00000319518 DNAJC8O75937 253 aaPredicted RBP22.19■■□□□ 1.14
CPNE7-202ENST00000319518 CALCAP01258 141 aa22.19■■□□□ 1.14
CPNE7-202ENST00000319518 IFNAR2P48551 515 aa22.19■■□□□ 1.14
CPNE7-202ENST00000319518 SLMAPQ14BN4 828 aa22.19■■□□□ 1.14
CPNE7-202ENST00000319518 CNGA2Q16280 664 aa22.19■■□□□ 1.14
CPNE7-202ENST00000319518 DCAF15Q66K64 600 aa22.19■■□□□ 1.14
CPNE7-202ENST00000319518 CCDC25Q86WR0 208 aa22.19■■□□□ 1.14
CPNE7-202ENST00000319518 DDX1Q92499 740 aaKnown RBP22.19■■□□□ 1.14
CPNE7-202ENST00000319518 RNF146Q9NTX7 359 aa22.19■■□□□ 1.14
CPNE7-202ENST00000319518 GTF3C4Q9UKN8 822 aa22.19■■□□□ 1.14
CPNE7-202ENST00000319518 DOCK1Q14185 1865 aa22.19■■□□□ 1.14
CPNE7-202ENST00000319518 DLATP10515 647 aaKnown RBP22.19■■□□□ 1.14
CPNE7-202ENST00000319518 CREB1P16220 341 aa22.19■■□□□ 1.14
CPNE7-202ENST00000319518 GHRHRQ02643 423 aa22.19■■□□□ 1.14
CPNE7-202ENST00000319518 ALCAMQ13740 583 aa22.19■■□□□ 1.14
CPNE7-202ENST00000319518 MFSD5Q6N075 450 aa22.19■■□□□ 1.14
CPNE7-202ENST00000319518 CYFIP1Q7L576 1253 aa22.19■■□□□ 1.14
CPNE7-202ENST00000319518 C1orf54Q8WWF1 131 aa22.19■■□□□ 1.14
CPNE7-202ENST00000319518 PDCD2LQ9BRP1 358 aa22.19■■□□□ 1.14
CPNE7-202ENST00000319518 LRRC19Q9H756 370 aa22.19■■□□□ 1.14
CPNE7-202ENST00000319518 PXMP2Q9NR77 195 aa22.19■■□□□ 1.14
CPNE7-202ENST00000319518 HIRAP54198 1017 aaPredicted RBP22.18■■□□□ 1.14
CPNE7-202ENST00000319518 LONRF1Q17RB8 773 aa22.18■■□□□ 1.14
CPNE7-202ENST00000319518 DHX38Q92620 1227 aaKnown RBP22.18■■□□□ 1.14
CPNE7-202ENST00000319518 ELAC2Q9BQ52 826 aaKnown RBP22.18■■□□□ 1.14
CPNE7-202ENST00000319518 HERPUD2Q9BSE4 406 aa22.18■■□□□ 1.14
CPNE7-202ENST00000319518 CDC42EP4Q9H3Q1 356 aaKnown RBP22.18■■□□□ 1.14
CPNE7-202ENST00000319518 TOPORSQ9NS56 1045 aaPredicted RBP22.18■■□□□ 1.14
CPNE7-202ENST00000319518 ZNF112Q9UJU3 913 aa22.18■■□□□ 1.14
CPNE7-202ENST00000319518 MTUS1Q9ULD2 1270 aa22.18■■□□□ 1.14
CPNE7-202ENST00000319518 PASKQ96RG2 1323 aa22.18■■□□□ 1.14
CPNE7-202ENST00000319518 MAPK13O15264 365 aa22.18■■□□□ 1.14
CPNE7-202ENST00000319518 PEX3P56589 373 aa22.18■■□□□ 1.14
CPNE7-202ENST00000319518 RWDD2BP57060 319 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms