RNA–Protein interactions for RNA: ENST00000317011.7

FOXR1-201, Transcript of forkhead box R1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXR1, Length 1,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-201ENST00000317011 NUBP1P53384 320 aa17.1■□□□□ 0.33
FOXR1-201ENST00000317011 CREMQ03060 361 aa17.1■□□□□ 0.33
FOXR1-201ENST00000317011 MCTP1Q6DN14 999 aa17.1■□□□□ 0.33
FOXR1-201ENST00000317011 DCLRE1AQ6PJP8 1040 aa17.1■□□□□ 0.33
FOXR1-201ENST00000317011 CCDC149Q6ZUS6 474 aa17.1■□□□□ 0.33
FOXR1-201ENST00000317011 PALB2Q86YC2 1186 aa17.1■□□□□ 0.33
FOXR1-201ENST00000317011 PRSS33Q8NF86 280 aa17.1■□□□□ 0.33
FOXR1-201ENST00000317011 ACSF2Q96CM8 615 aaPredicted RBP17.1■□□□□ 0.33
FOXR1-201ENST00000317011 DRC1Q96MC2 740 aa17.1■□□□□ 0.33
FOXR1-201ENST00000317011 KCNG1Q9UIX4 513 aa17.1■□□□□ 0.33
FOXR1-201ENST00000317011 SF3B1O75533 1304 aaKnown RBP eCLIP17.1■□□□□ 0.33
FOXR1-201ENST00000317011 PHLPP2Q6ZVD8 1323 aa17.1■□□□□ 0.33
FOXR1-201ENST00000317011 SMIM28A0A1B0GU29 152 aa17.09■□□□□ 0.33
FOXR1-201ENST00000317011 CCDC169A6NNP5 214 aa17.09■□□□□ 0.33
FOXR1-201ENST00000317011 SLC26A4O43511 780 aa17.09■□□□□ 0.33
FOXR1-201ENST00000317011 PDGFBP01127 241 aaPredicted RBP17.09■□□□□ 0.33
FOXR1-201ENST00000317011 SPATA31D3P0C874 917 aa17.09■□□□□ 0.33
FOXR1-201ENST00000317011 RPL17P18621 184 aaKnown RBP17.09■□□□□ 0.33
FOXR1-201ENST00000317011 LIG1P18858 919 aa17.09■□□□□ 0.33
FOXR1-201ENST00000317011 FGFR3P22607 806 aa17.09■□□□□ 0.33
FOXR1-201ENST00000317011 SLC12A3P55017 1021 aa17.09■□□□□ 0.33
FOXR1-201ENST00000317011 TCF15Q12870 199 aa17.09■□□□□ 0.33
FOXR1-201ENST00000317011 ELAVL2Q12926 359 aaKnown RBP17.09■□□□□ 0.33
FOXR1-201ENST00000317011 UPP1Q16831 310 aa17.09■□□□□ 0.33
FOXR1-201ENST00000317011 FAM171A1Q5VUB5 890 aa17.09■□□□□ 0.33
FOXR1-201ENST00000317011 ELMSAN1Q6PJG2 1045 aa17.09■□□□□ 0.33
FOXR1-201ENST00000317011 PRSS55Q6UWB4 352 aaPredicted RBP17.09■□□□□ 0.33
FOXR1-201ENST00000317011 SPATA31D4Q6ZUB0 917 aa17.09■□□□□ 0.33
FOXR1-201ENST00000317011 SUGP1Q8IWZ8 645 aaKnown RBP17.09■□□□□ 0.33
FOXR1-201ENST00000317011 PRKD2Q9BZL6 878 aa17.09■□□□□ 0.33
FOXR1-201ENST00000317011 CDT1Q9H211 546 aa17.09■□□□□ 0.33
FOXR1-201ENST00000317011 SMOC2Q9H3U7 446 aa17.09■□□□□ 0.33
FOXR1-201ENST00000317011 KCNK12Q9HB15 430 aa17.09■□□□□ 0.33
FOXR1-201ENST00000317011 KCND2Q9NZV8 630 aa17.09■□□□□ 0.33
FOXR1-201ENST00000317011 EPS15L1Q9UBC2 864 aa17.09■□□□□ 0.33
FOXR1-201ENST00000317011 GDAQ9Y2T3 454 aa17.09■□□□□ 0.33
FOXR1-201ENST00000317011 TDRD15B5MCY1 1934 aaKnown RBP17.08■□□□□ 0.33
FOXR1-201ENST00000317011 SFI1A8K8P3 1242 aa17.08■□□□□ 0.32
FOXR1-201ENST00000317011 ZMYND10O75800 440 aa17.08■□□□□ 0.32
FOXR1-201ENST00000317011 VCPP55072 806 aaKnown RBP17.08■□□□□ 0.32
FOXR1-201ENST00000317011 DMP1Q13316 513 aaPredicted RBP17.08■□□□□ 0.32
FOXR1-201ENST00000317011 TMEM132AQ24JP5 1023 aa17.08■□□□□ 0.32
FOXR1-201ENST00000317011 TMEM119Q4V9L6 283 aa17.08■□□□□ 0.32
FOXR1-201ENST00000317011 ARSHQ5FYA8 562 aa17.08■□□□□ 0.32
FOXR1-201ENST00000317011 APBB1IPQ7Z5R6 666 aaPredicted RBP17.08■□□□□ 0.32
FOXR1-201ENST00000317011 ZBTB33Q86T24 672 aa17.08■□□□□ 0.32
FOXR1-201ENST00000317011 TMEM161BQ8NDZ6 487 aa17.08■□□□□ 0.32
FOXR1-201ENST00000317011 TARS2Q9BW92 718 aaKnown RBP17.08■□□□□ 0.32
FOXR1-201ENST00000317011 MRPL4Q9BYD3 311 aaKnown RBP17.08■□□□□ 0.32
FOXR1-201ENST00000317011 KMT5AQ9NQR1 393 aa17.08■□□□□ 0.32
FOXR1-201ENST00000317011 IGSF9Q9P2J2 1179 aa17.08■□□□□ 0.32
FOXR1-201ENST00000317011 CACNA1HO95180 2353 aa17.08■□□□□ 0.32
FOXR1-201ENST00000317011 MEFVO15553 781 aaPredicted RBP17.07■□□□□ 0.32
FOXR1-201ENST00000317011 MCF2P10911 925 aa17.07■□□□□ 0.32
FOXR1-201ENST00000317011 PLS3P13797 630 aa17.07■□□□□ 0.32
FOXR1-201ENST00000317011 KCNE1P15382 129 aa17.07■□□□□ 0.32
FOXR1-201ENST00000317011 TDGQ13569 410 aa17.07■□□□□ 0.32
FOXR1-201ENST00000317011 CUL4AQ13619 759 aa17.07■□□□□ 0.32
FOXR1-201ENST00000317011 RAB33AQ14088 237 aa17.07■□□□□ 0.32
FOXR1-201ENST00000317011 LARP1BQ659C4 914 aaKnown RBP17.07■□□□□ 0.32
FOXR1-201ENST00000317011 PDXDC1Q6P996 788 aa17.07■□□□□ 0.32
FOXR1-201ENST00000317011 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.07■□□□□ 0.32
FOXR1-201ENST00000317011 CEP120Q8N960 986 aa17.07■□□□□ 0.32
FOXR1-201ENST00000317011 HASPINQ8TF76 798 aa17.07■□□□□ 0.32
FOXR1-201ENST00000317011 SMG7Q92540 1137 aaKnown RBP17.07■□□□□ 0.32
FOXR1-201ENST00000317011 AK8Q96MA6 479 aa17.07■□□□□ 0.32
FOXR1-201ENST00000317011 UROC1Q96N76 676 aa17.07■□□□□ 0.32
FOXR1-201ENST00000317011 ZMAT2Q96NC0 199 aaKnown RBP17.07■□□□□ 0.32
FOXR1-201ENST00000317011 FBXW11Q9UKB1 542 aa17.07■□□□□ 0.32
FOXR1-201ENST00000317011 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.07■□□□□ 0.32
FOXR1-201ENST00000317011 VWA3AA6NCI4 1184 aa17.06■□□□□ 0.32
FOXR1-201ENST00000317011 H3BQV1 296 aa17.06■□□□□ 0.32
FOXR1-201ENST00000317011 SLC16A4O15374 487 aa17.06■□□□□ 0.32
FOXR1-201ENST00000317011 ADAM12O43184 909 aa17.06■□□□□ 0.32
FOXR1-201ENST00000317011 POU2F2P09086 479 aa17.06■□□□□ 0.32
FOXR1-201ENST00000317011 PLA2G4BP0C869 781 aa17.06■□□□□ 0.32
FOXR1-201ENST00000317011 CLCNKBP51801 687 aa17.06■□□□□ 0.32
FOXR1-201ENST00000317011 PTPN5P54829 565 aa17.06■□□□□ 0.32
FOXR1-201ENST00000317011 SOX4Q06945 474 aaPredicted RBP17.06■□□□□ 0.32
FOXR1-201ENST00000317011 UVSSAQ2YD98 709 aa17.06■□□□□ 0.32
FOXR1-201ENST00000317011 RTL10Q7L3V2 364 aa17.06■□□□□ 0.32
FOXR1-201ENST00000317011 ALYREFQ86V81 257 aaKnown RBP17.06■□□□□ 0.32
FOXR1-201ENST00000317011 STAMQ92783 540 aa17.06■□□□□ 0.32
FOXR1-201ENST00000317011 NXPE3Q969Y0 559 aa17.06■□□□□ 0.32
FOXR1-201ENST00000317011 DDX27Q96GQ7 796 aaKnown RBP17.06■□□□□ 0.32
FOXR1-201ENST00000317011 ZBTB45Q96K62 511 aaPredicted RBP17.06■□□□□ 0.32
FOXR1-201ENST00000317011 MYADMQ96S97 322 aa17.06■□□□□ 0.32
FOXR1-201ENST00000317011 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.06■□□□□ 0.32
FOXR1-201ENST00000317011 SMC3Q9UQE7 1217 aa17.06■□□□□ 0.32
FOXR1-201ENST00000317011 BACE2Q9Y5Z0 518 aa17.06■□□□□ 0.32
FOXR1-201ENST00000317011 CLUHO75153 1309 aa17.05■□□□□ 0.32
FOXR1-201ENST00000317011 SPDYE4A6NLX3 237 aa17.05■□□□□ 0.32
FOXR1-201ENST00000317011 TBC1D4O60343 1298 aa17.05■□□□□ 0.32
FOXR1-201ENST00000317011 TOM1L1O75674 476 aa17.05■□□□□ 0.32
FOXR1-201ENST00000317011 B3GAT3O94766 335 aa17.05■□□□□ 0.32
FOXR1-201ENST00000317011 HNRNPA1P09651 372 aaKnown RBP eCLIP17.05■□□□□ 0.32
FOXR1-201ENST00000317011 MYBP10242 640 aa17.05■□□□□ 0.32
FOXR1-201ENST00000317011 MAPTP10636 758 aaKnown RBP17.05■□□□□ 0.32
FOXR1-201ENST00000317011 HOXA9P31269 272 aa17.05■□□□□ 0.32
FOXR1-201ENST00000317011 PSMD5Q16401 504 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms