RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 EPM2AIP1Q7L775 607 aaPredicted RBP8.59□□□□□ -1.03
CDC42-201ENST00000315554 ZNF280BQ86YH2 543 aa8.59□□□□□ -1.03
CDC42-201ENST00000315554 SMYD4Q8IYR2 804 aaPredicted RBP8.59□□□□□ -1.03
CDC42-201ENST00000315554 CMTR2Q8IYT2 770 aaKnown RBP8.59□□□□□ -1.03
CDC42-201ENST00000315554 TMEM130Q8N3G9 435 aa8.59□□□□□ -1.03
CDC42-201ENST00000315554 DEFB123Q8N688 67 aa8.59□□□□□ -1.03
CDC42-201ENST00000315554 KIAA0895Q8NCT3 520 aa8.59□□□□□ -1.03
CDC42-201ENST00000315554 GDPD5Q8WTR4 605 aa8.59□□□□□ -1.03
CDC42-201ENST00000315554 SCFD1Q8WVM8 642 aa8.59□□□□□ -1.03
CDC42-201ENST00000315554 RABGGTAQ92696 567 aa8.59□□□□□ -1.03
CDC42-201ENST00000315554 TIGD1Q96MW7 591 aa8.59□□□□□ -1.03
CDC42-201ENST00000315554 MSTO1Q9BUK6 570 aa8.59□□□□□ -1.03
CDC42-201ENST00000315554 SEMA6BQ9H3T3 888 aa8.59□□□□□ -1.03
CDC42-201ENST00000315554 PCIF1Q9H4Z3 704 aa8.59□□□□□ -1.03
CDC42-201ENST00000315554 CWH43Q9H720 699 aa8.59□□□□□ -1.03
CDC42-201ENST00000315554 TBC1D13Q9NVG8 400 aa8.59□□□□□ -1.03
CDC42-201ENST00000315554 WDR70Q9NW82 654 aa8.59□□□□□ -1.03
CDC42-201ENST00000315554 CACNG4Q9UBN1 327 aa8.59□□□□□ -1.03
CDC42-201ENST00000315554 PLAGL2Q9UPG8 496 aa8.59□□□□□ -1.03
CDC42-201ENST00000315554 MAPK8IP1Q9UQF2 711 aa8.59□□□□□ -1.03
CDC42-201ENST00000315554 PCDHA5Q9Y5H7 936 aa8.59□□□□□ -1.03
CDC42-201ENST00000315554 LAMA3Q16787 3333 aa8.58□□□□□ -1.04
CDC42-201ENST00000315554 GOLGA8IPA6NC78 632 aa8.58□□□□□ -1.04
CDC42-201ENST00000315554 ARL5CA6NH57 179 aa8.58□□□□□ -1.04
CDC42-201ENST00000315554 GOLGA8JA6NMD2 632 aa8.58□□□□□ -1.04
CDC42-201ENST00000315554 NT5C1B-RDH14C9J2C7 533 aa8.58□□□□□ -1.04
CDC42-201ENST00000315554 BIN1O00499 593 aa8.58□□□□□ -1.04
CDC42-201ENST00000315554 CLIC2O15247 247 aa8.58□□□□□ -1.04
CDC42-201ENST00000315554 MEFVO15553 781 aaPredicted RBP8.58□□□□□ -1.04
CDC42-201ENST00000315554 ZC3H11AO75152 810 aaKnown RBP eCLIP8.58□□□□□ -1.04
CDC42-201ENST00000315554 PIGRP01833 764 aa8.58□□□□□ -1.04
CDC42-201ENST00000315554 LINC00271P0C7V0 271 aa8.58□□□□□ -1.04
CDC42-201ENST00000315554 CXCL8P10145 99 aa8.58□□□□□ -1.04
CDC42-201ENST00000315554 ADSSP30520 456 aa8.58□□□□□ -1.04
CDC42-201ENST00000315554 GRM5P41594 1212 aa8.58□□□□□ -1.04
CDC42-201ENST00000315554 RNASELQ05823 741 aaKnown RBP8.58□□□□□ -1.04
CDC42-201ENST00000315554 SPAG1Q07617 926 aa8.58□□□□□ -1.04
CDC42-201ENST00000315554 MCL1Q07820 350 aa8.58□□□□□ -1.04
CDC42-201ENST00000315554 ZNF787Q6DD87 383 aa8.58□□□□□ -1.04
CDC42-201ENST00000315554 HACE1Q8IYU2 909 aa8.58□□□□□ -1.04
CDC42-201ENST00000315554 LRRC43Q8N309 656 aa8.58□□□□□ -1.04
CDC42-201ENST00000315554 SLC17A8Q8NDX2 589 aa8.58□□□□□ -1.04
CDC42-201ENST00000315554 URGCPQ8TCY9 931 aa8.58□□□□□ -1.04
CDC42-201ENST00000315554 GPT2Q8TD30 523 aa8.58□□□□□ -1.04
CDC42-201ENST00000315554 POMGNT1Q8WZA1 660 aa8.58□□□□□ -1.04
CDC42-201ENST00000315554 SMARCE1Q969G3 411 aa8.58□□□□□ -1.04
CDC42-201ENST00000315554 CCDC47Q96A33 483 aaKnown RBP8.58□□□□□ -1.04
CDC42-201ENST00000315554 HVCN1Q96D96 273 aa8.58□□□□□ -1.04
CDC42-201ENST00000315554 SAAL1Q96ER3 474 aa8.58□□□□□ -1.04
CDC42-201ENST00000315554 TGS1Q96RS0 853 aaKnown RBP8.58□□□□□ -1.04
CDC42-201ENST00000315554 CBWD1Q9BRT8 395 aa8.58□□□□□ -1.04
CDC42-201ENST00000315554 CCDC94Q9BW85 323 aaPredicted RBP8.58□□□□□ -1.04
CDC42-201ENST00000315554 DNAJB4Q9UDY4 337 aa8.58□□□□□ -1.04
CDC42-201ENST00000315554 EXOC7Q9UPT5 735 aa8.58□□□□□ -1.04
CDC42-201ENST00000315554 A0A0B4J269 797 aa8.57□□□□□ -1.04
CDC42-201ENST00000315554 F8W810 466 aa8.57□□□□□ -1.04
CDC42-201ENST00000315554 GOLGA6L22H0YM25 854 aa8.57□□□□□ -1.04
CDC42-201ENST00000315554 PTGESO14684 152 aa8.57□□□□□ -1.04
CDC42-201ENST00000315554 DDHD2O94830 711 aa8.57□□□□□ -1.04
CDC42-201ENST00000315554 RHOBTB3O94955 611 aa8.57□□□□□ -1.04
CDC42-201ENST00000315554 SMC2O95347 1197 aa8.57□□□□□ -1.04
CDC42-201ENST00000315554 MYL1P05976 194 aa8.57□□□□□ -1.04
CDC42-201ENST00000315554 ACOT2P49753 483 aa8.57□□□□□ -1.04
CDC42-201ENST00000315554 ERVK-21P61565 698 aa8.57□□□□□ -1.04
CDC42-201ENST00000315554 ALCAMQ13740 583 aa8.57□□□□□ -1.04
CDC42-201ENST00000315554 EPC2Q52LR7 807 aa8.57□□□□□ -1.04
CDC42-201ENST00000315554 FAM43BQ6ZT52 329 aaPredicted RBP8.57□□□□□ -1.04
CDC42-201ENST00000315554 STXBP4Q6ZWJ1 553 aa8.57□□□□□ -1.04
CDC42-201ENST00000315554 APBB1IPQ7Z5R6 666 aaPredicted RBP8.57□□□□□ -1.04
CDC42-201ENST00000315554 COLGALT1Q8NBJ5 622 aa8.57□□□□□ -1.04
CDC42-201ENST00000315554 GSTCDQ8NEC7 633 aa8.57□□□□□ -1.04
CDC42-201ENST00000315554 ZNF507Q8TCN5 953 aa8.57□□□□□ -1.04
CDC42-201ENST00000315554 MYLIPQ8WY64 445 aa8.57□□□□□ -1.04
CDC42-201ENST00000315554 KCNN1Q92952 543 aa8.57□□□□□ -1.04
CDC42-201ENST00000315554 ZDHHC16Q969W1 377 aa8.57□□□□□ -1.04
CDC42-201ENST00000315554 CCDC34Q96HJ3 373 aa8.57□□□□□ -1.04
CDC42-201ENST00000315554 FAM84AQ96KN4 292 aa8.57□□□□□ -1.04
CDC42-201ENST00000315554 ACAP3Q96P50 834 aa8.57□□□□□ -1.04
CDC42-201ENST00000315554 RPS6KC1Q96S38 1066 aa8.57□□□□□ -1.04
CDC42-201ENST00000315554 NRDE2Q9H7Z3 1164 aa8.57□□□□□ -1.04
CDC42-201ENST00000315554 AGO2Q9UKV8 859 aaKnown RBP8.57□□□□□ -1.04
CDC42-201ENST00000315554 GIT1Q9Y2X7 761 aa8.57□□□□□ -1.04
CDC42-201ENST00000315554 PRG3Q9Y2Y8 225 aaPredicted RBP8.57□□□□□ -1.04
CDC42-201ENST00000315554 FNDC1Q4ZHG4 1894 aaPredicted RBP8.57□□□□□ -1.04
CDC42-201ENST00000315554 LAMA2P24043 3122 aaKnown RBP8.57□□□□□ -1.04
CDC42-201ENST00000315554 CASTOR2A6NHX0 329 aa8.57□□□□□ -1.04
CDC42-201ENST00000315554 OGTO15294 1046 aa8.57□□□□□ -1.04
CDC42-201ENST00000315554 EIF3DO15371 548 aaKnown RBP eCLIP8.57□□□□□ -1.04
CDC42-201ENST00000315554 TGFB1I1O43294 461 aa8.57□□□□□ -1.04
CDC42-201ENST00000315554 FAM189A1O60320 539 aa8.57□□□□□ -1.04
CDC42-201ENST00000315554 SCP2P22307 547 aa8.57□□□□□ -1.04
CDC42-201ENST00000315554 ABCD1P33897 745 aa8.57□□□□□ -1.04
CDC42-201ENST00000315554 BMPR1AP36894 532 aa8.57□□□□□ -1.04
CDC42-201ENST00000315554 SLC11A1P49279 550 aa8.57□□□□□ -1.04
CDC42-201ENST00000315554 CYP2J2P51589 502 aa8.57□□□□□ -1.04
CDC42-201ENST00000315554 YARSP54577 528 aaKnown RBP8.57□□□□□ -1.04
CDC42-201ENST00000315554 PSMD2Q13200 908 aa8.57□□□□□ -1.04
CDC42-201ENST00000315554 GPM6BQ13491 265 aa8.57□□□□□ -1.04
CDC42-201ENST00000315554 KCNB1Q14721 858 aa8.57□□□□□ -1.04
CDC42-201ENST00000315554 ENOX2Q16206 610 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms