RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 STAP1Q9ULZ2 295 aa14.59□□□□□ -0.07
SPAST-201ENST00000315285 CAPN6Q9Y6Q1 641 aa14.59□□□□□ -0.07
SPAST-201ENST00000315285 PHF20L1A8MW92 1017 aa14.59□□□□□ -0.07
SPAST-201ENST00000315285 STAT5BP51692 787 aa14.59□□□□□ -0.07
SPAST-201ENST00000315285 NOP14P78316 857 aaKnown RBP14.59□□□□□ -0.07
SPAST-201ENST00000315285 FSCBQ5H9T9 825 aa14.59□□□□□ -0.07
SPAST-201ENST00000315285 C9orf72Q96LT7 481 aa14.59□□□□□ -0.07
SPAST-201ENST00000315285 SPATA33Q96N06 139 aa14.59□□□□□ -0.07
SPAST-201ENST00000315285 XPO6Q96QU8 1125 aaKnown RBP14.59□□□□□ -0.07
SPAST-201ENST00000315285 POLR3CQ9BUI4 534 aaPredicted RBP14.59□□□□□ -0.07
SPAST-201ENST00000315285 NAGPAQ9UK23 515 aa14.59□□□□□ -0.07
SPAST-201ENST00000315285 ARL2BPQ9Y2Y0 163 aa14.59□□□□□ -0.07
SPAST-201ENST00000315285 VWDEQ8N2E2 1590 aa14.59□□□□□ -0.07
SPAST-201ENST00000315285 ARPP19P56211 112 aa14.59□□□□□ -0.07
SPAST-201ENST00000315285 P3H1Q32P28 736 aa14.59□□□□□ -0.07
SPAST-201ENST00000315285 WDR72Q3MJ13 1102 aa14.59□□□□□ -0.07
SPAST-201ENST00000315285 KRT80Q6KB66 452 aa14.59□□□□□ -0.07
SPAST-201ENST00000315285 GJB7Q6PEY0 223 aa14.59□□□□□ -0.07
SPAST-201ENST00000315285 APOBEC3FQ8IUX4 373 aaKnown RBP14.59□□□□□ -0.07
SPAST-201ENST00000315285 NUDCD3Q8IVD9 361 aa14.59□□□□□ -0.07
SPAST-201ENST00000315285 TMEM143Q96AN5 459 aa14.59□□□□□ -0.07
SPAST-201ENST00000315285 HAUS8Q9BT25 410 aa14.59□□□□□ -0.07
SPAST-201ENST00000315285 SLC13A1Q9BZW2 595 aa14.59□□□□□ -0.07
SPAST-201ENST00000315285 DHX35Q9H5Z1 703 aaKnown RBP14.59□□□□□ -0.07
SPAST-201ENST00000315285 CREB3O43889 395 aa14.58□□□□□ -0.07
SPAST-201ENST00000315285 PMLP29590 882 aa14.58□□□□□ -0.07
SPAST-201ENST00000315285 POLE2P56282 527 aa14.58□□□□□ -0.07
SPAST-201ENST00000315285 COPS2P61201 443 aa14.58□□□□□ -0.07
SPAST-201ENST00000315285 OCRLQ01968 901 aa14.58□□□□□ -0.07
SPAST-201ENST00000315285 ADGRA1Q86SQ6 560 aa14.58□□□□□ -0.07
SPAST-201ENST00000315285 ILDR1Q86SU0 546 aaPredicted RBP14.58□□□□□ -0.07
SPAST-201ENST00000315285 MXRA8Q9BRK3 442 aa14.58□□□□□ -0.07
SPAST-201ENST00000315285 LACRTQ9GZZ8 138 aa14.58□□□□□ -0.07
SPAST-201ENST00000315285 TCRBV5S4A2TA0A5A2 114 aa14.58□□□□□ -0.08
SPAST-201ENST00000315285 EIF3EP60228 445 aaKnown RBP14.58□□□□□ -0.08
SPAST-201ENST00000315285 SLC12A1Q13621 1099 aa14.58□□□□□ -0.08
SPAST-201ENST00000315285 VPS72Q15906 364 aa14.58□□□□□ -0.08
SPAST-201ENST00000315285 C1orf146Q5VVC0 180 aa14.58□□□□□ -0.08
SPAST-201ENST00000315285 C1orf228Q6PIY5 440 aa14.58□□□□□ -0.08
SPAST-201ENST00000315285 ANKMY2Q8IV38 441 aa14.58□□□□□ -0.08
SPAST-201ENST00000315285 KCNV2Q8TDN2 545 aa14.58□□□□□ -0.08
SPAST-201ENST00000315285 C18orf8Q96DM3 657 aa14.58□□□□□ -0.08
SPAST-201ENST00000315285 SENP7Q9BQF6 1050 aa14.58□□□□□ -0.08
SPAST-201ENST00000315285 CFAP69A5D8W1 941 aa14.58□□□□□ -0.08
SPAST-201ENST00000315285 P4HA2O15460 535 aa14.58□□□□□ -0.08
SPAST-201ENST00000315285 PAMP19021 973 aa14.58□□□□□ -0.08
SPAST-201ENST00000315285 ESRRGP62508 458 aa14.58□□□□□ -0.08
SPAST-201ENST00000315285 PLA2G4FQ68DD2 849 aa14.58□□□□□ -0.08
SPAST-201ENST00000315285 DBR1Q9UK59 544 aaKnown RBP14.58□□□□□ -0.08
SPAST-201ENST00000315285 FAM205AQ6ZU69 1335 aa14.58□□□□□ -0.08
SPAST-201ENST00000315285 PRKCBP05771 671 aa14.58□□□□□ -0.08
SPAST-201ENST00000315285 NR3C2P08235 984 aa14.58□□□□□ -0.08
SPAST-201ENST00000315285 CDK17Q00537 523 aa14.58□□□□□ -0.08
SPAST-201ENST00000315285 PAPD7Q5XG87 772 aaKnown RBP14.58□□□□□ -0.08
SPAST-201ENST00000315285 RBBP8NLQ8NC74 664 aaPredicted RBP14.58□□□□□ -0.08
SPAST-201ENST00000315285 PCDHB2Q9Y5E7 798 aa14.58□□□□□ -0.08
SPAST-201ENST00000315285 TMEM131LA2VDJ0 1609 aa14.58□□□□□ -0.08
SPAST-201ENST00000315285 ATMINO43313 823 aaPredicted RBP14.57□□□□□ -0.08
SPAST-201ENST00000315285 TAC1P20366 129 aa14.57□□□□□ -0.08
SPAST-201ENST00000315285 NCOA4Q13772 614 aa14.57□□□□□ -0.08
SPAST-201ENST00000315285 TWF2Q6IBS0 349 aaKnown RBP14.57□□□□□ -0.08
SPAST-201ENST00000315285 TPCN2Q8NHX9 752 aa14.57□□□□□ -0.08
SPAST-201ENST00000315285 PIP4K2CQ8TBX8 421 aa14.57□□□□□ -0.08
SPAST-201ENST00000315285 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.57□□□□□ -0.08
SPAST-201ENST00000315285 TEX13BQ9BXU2 312 aa14.57□□□□□ -0.08
SPAST-201ENST00000315285 UPF3AQ9H1J1 476 aaKnown RBP14.57□□□□□ -0.08
SPAST-201ENST00000315285 SEMA6BQ9H3T3 888 aa14.57□□□□□ -0.08
SPAST-201ENST00000315285 SMYD3Q9H7B4 428 aa14.57□□□□□ -0.08
SPAST-201ENST00000315285 L1RE1Q9UN81 338 aa14.57□□□□□ -0.08
SPAST-201ENST00000315285 F5H423 210 aaPredicted RBP14.57□□□□□ -0.08
SPAST-201ENST00000315285 MSH4O15457 936 aa14.57□□□□□ -0.08
SPAST-201ENST00000315285 SEC24CP53992 1094 aa14.57□□□□□ -0.08
SPAST-201ENST00000315285 GCOM2Q9BZD3 368 aaPredicted RBP14.57□□□□□ -0.08
SPAST-201ENST00000315285 CARD9Q9H257 536 aa14.57□□□□□ -0.08
SPAST-201ENST00000315285 TMEM8AQ9HCN3 771 aa14.57□□□□□ -0.08
SPAST-201ENST00000315285 GGT7Q9UJ14 662 aa14.57□□□□□ -0.08
SPAST-201ENST00000315285 SMG5Q9UPR3 1016 aaKnown RBP14.57□□□□□ -0.08
SPAST-201ENST00000315285 NWD1Q149M9 1564 aa14.57□□□□□ -0.08
SPAST-201ENST00000315285 ASAP2O43150 1006 aa14.57□□□□□ -0.08
SPAST-201ENST00000315285 HERVK_113P62684 666 aa14.57□□□□□ -0.08
SPAST-201ENST00000315285 COG2Q14746 738 aa14.57□□□□□ -0.08
SPAST-201ENST00000315285 BFARQ9NZS9 450 aa14.57□□□□□ -0.08
SPAST-201ENST00000315285 TTC36A6NLP5 189 aa14.57□□□□□ -0.08
SPAST-201ENST00000315285 CENPPQ6IPU0 288 aa14.57□□□□□ -0.08
SPAST-201ENST00000315285 EXT2Q93063 718 aa14.57□□□□□ -0.08
SPAST-201ENST00000315285 AGPAT3Q9NRZ7 376 aa14.57□□□□□ -0.08
SPAST-201ENST00000315285 A8MXQ7 604 aa14.56□□□□□ -0.08
SPAST-201ENST00000315285 GNGT2O14610 69 aa14.56□□□□□ -0.08
SPAST-201ENST00000315285 PRLRP16471 622 aa14.56□□□□□ -0.08
SPAST-201ENST00000315285 KCNJ1P48048 391 aa14.56□□□□□ -0.08
SPAST-201ENST00000315285 MKRN4PQ13434 485 aaPredicted RBP14.56□□□□□ -0.08
SPAST-201ENST00000315285 ST13P4Q8IZP2 240 aaPredicted RBP14.56□□□□□ -0.08
SPAST-201ENST00000315285 FAM161BQ96MY7 647 aa14.56□□□□□ -0.08
SPAST-201ENST00000315285 TTC1Q99614 292 aa14.56□□□□□ -0.08
SPAST-201ENST00000315285 OSBPL8Q9BZF1 889 aa14.56□□□□□ -0.08
SPAST-201ENST00000315285 DRC3Q9H069 523 aa14.56□□□□□ -0.08
SPAST-201ENST00000315285 ZNF70Q9UC06 446 aaPredicted RBP14.56□□□□□ -0.08
SPAST-201ENST00000315285 SALL1Q9NSC2 1324 aa14.56□□□□□ -0.08
SPAST-201ENST00000315285 ADORA2BP29275 332 aa14.56□□□□□ -0.08
SPAST-201ENST00000315285 EPHB1P54762 984 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms