RNA–Protein interactions for RNA: ENST00000311745.9

RBFOX1-201, Transcript of RNA binding fox-1 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBFOX1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-201ENST00000311745 ALS2CLQ60I27 953 aa10.18□□□□□ -0.78
RBFOX1-201ENST00000311745 RINT1Q6NUQ1 792 aa10.18□□□□□ -0.78
RBFOX1-201ENST00000311745 TMEM214Q6NUQ4 689 aaKnown RBP10.18□□□□□ -0.78
RBFOX1-201ENST00000311745 FAM83AQ86UY5 434 aa10.18□□□□□ -0.78
RBFOX1-201ENST00000311745 CDK5RAP3Q96JB5 506 aa10.18□□□□□ -0.78
RBFOX1-201ENST00000311745 IRF2BPLQ9H1B7 796 aa10.18□□□□□ -0.78
RBFOX1-201ENST00000311745 CCDC68Q9H2F9 335 aa10.18□□□□□ -0.78
RBFOX1-201ENST00000311745 SH2D4AQ9H788 454 aa10.18□□□□□ -0.78
RBFOX1-201ENST00000311745 GUCA1BQ9UMX6 200 aa10.18□□□□□ -0.78
RBFOX1-201ENST00000311745 FOSP01100 380 aaPredicted RBP10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 PENKP01210 267 aaPredicted RBP10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 VIMP08670 466 aaKnown RBP10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 ITGB5P18084 799 aa10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 EIF4A3P38919 411 aaKnown RBP10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 VAV2P52735 878 aa10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 ZNF131P52739 623 aa10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 PMS2P54278 862 aa10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 FKBP3Q00688 224 aaKnown RBP10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 EDRF1Q3B7T1 1238 aa10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 CCNI2Q6ZMN8 369 aaPredicted RBP10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 DEFB132Q7Z7B7 95 aa10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 RTKN2Q8IZC4 609 aa10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 DAW1Q8N136 415 aa10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 RBM46Q8TBY0 533 aaKnown RBP10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 FBF1Q8TES7 1133 aa10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 HDAC7Q8WUI4 952 aa10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 UCMAQ8WVF2 138 aa10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 RNF25Q96BH1 459 aaPredicted RBP10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 MLXIPQ9HAP2 919 aa10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 TRPV5Q9NQA5 729 aa10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 SBF1O95248 1867 aa10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 NFKBIEO00221 500 aa10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 AKAP3O75969 853 aa10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 SPATA31D3P0C874 917 aa10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 GSTT2P0CG29 244 aa10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 GSTT2BP0CG30 244 aa10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 TMOD1P28289 359 aa10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 ALDH5A1P51649 535 aaPredicted RBP10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 LACTBP83111 547 aaPredicted RBP10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 DUS1LQ6P1R4 473 aaKnown RBP10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 SPATA31D4Q6ZUB0 917 aa10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 PPFIBP2Q8ND30 876 aa10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 RSPH1Q8WYR4 309 aa10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 AGBL1Q96MI9 1066 aa10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 TUBA8Q9NY65 449 aaPredicted RBP10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 CARD8Q9Y2G2 431 aa10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 TMED5Q9Y3A6 229 aa10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 PCDHA13Q9Y5I0 950 aa10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 GMEB1Q9Y692 573 aa10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 TTLL13PA6NNM8 815 aa10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 H0Y3Z8 333 aa10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 EYA4O95677 639 aa10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 BCRP11274 1271 aa10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 CASP4P49662 377 aa10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 RAD23BP54727 409 aa10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 JAM2P57087 298 aa10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 ZNF280AP59817 542 aaPredicted RBP10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 UBXN2AP68543 259 aa10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 CYP4A11Q02928 519 aa10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 MAP7Q14244 749 aa10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 CFAP58Q5T655 872 aa10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 CCDC174Q6PII3 467 aa10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 CREG2Q8IUH2 290 aa10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 CYP4X1Q8N118 509 aa10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 AGBL3Q8NEM8 1001 aa10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 WNK4Q96J92 1243 aa10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 CCT7Q99832 543 aa10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 GPR88Q9GZN0 384 aa10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 ATAD3AQ9NVI7 634 aa10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 STK32BQ9NY57 414 aa10.17□□□□□ -0.78
RBFOX1-201ENST00000311745 MCCD1P59942 119 aaPredicted RBP10.16□□□□□ -0.78
RBFOX1-201ENST00000311745 GFPT1Q06210 699 aaPredicted RBP10.16□□□□□ -0.78
RBFOX1-201ENST00000311745 CTTNQ14247 550 aaKnown RBP10.16□□□□□ -0.78
RBFOX1-201ENST00000311745 COG2Q14746 738 aa10.16□□□□□ -0.78
RBFOX1-201ENST00000311745 EPHA7Q15375 998 aa10.16□□□□□ -0.78
RBFOX1-201ENST00000311745 CLPPQ16740 277 aaPredicted RBP10.16□□□□□ -0.78
RBFOX1-201ENST00000311745 RUFY4Q6ZNE9 571 aa10.16□□□□□ -0.78
RBFOX1-201ENST00000311745 IRF2BP2Q7Z5L9 587 aa10.16□□□□□ -0.78
RBFOX1-201ENST00000311745 TSEN2Q8NCE0 465 aaKnown RBP10.16□□□□□ -0.78
RBFOX1-201ENST00000311745 DYDC2Q96IM9 177 aa10.16□□□□□ -0.78
RBFOX1-201ENST00000311745 VPS33BQ9H267 617 aa10.16□□□□□ -0.78
RBFOX1-201ENST00000311745 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.16□□□□□ -0.78
RBFOX1-201ENST00000311745 ZNRF3Q9ULT6 936 aa10.16□□□□□ -0.78
RBFOX1-201ENST00000311745 PPME1Q9Y570 386 aa10.16□□□□□ -0.78
RBFOX1-201ENST00000311745 TACC1O75410 805 aa10.16□□□□□ -0.78
RBFOX1-201ENST00000311745 ACTN1P12814 892 aa10.16□□□□□ -0.78
RBFOX1-201ENST00000311745 VARSP26640 1264 aaKnown RBP10.16□□□□□ -0.78
RBFOX1-201ENST00000311745 PHEXP78562 749 aa10.16□□□□□ -0.78
RBFOX1-201ENST00000311745 MRPS9P82933 396 aaKnown RBP10.16□□□□□ -0.78
RBFOX1-201ENST00000311745 DHX9Q08211 1270 aaKnown RBP10.16□□□□□ -0.78
RBFOX1-201ENST00000311745 HERC4Q5GLZ8 1057 aaPredicted RBP10.16□□□□□ -0.78
RBFOX1-201ENST00000311745 SYN2Q92777 582 aaPredicted RBP10.16□□□□□ -0.78
RBFOX1-201ENST00000311745 ZIM3Q96PE6 472 aa10.16□□□□□ -0.78
RBFOX1-201ENST00000311745 BHMT2Q9H2M3 363 aa10.16□□□□□ -0.78
RBFOX1-201ENST00000311745 CEP72Q9P209 647 aa10.16□□□□□ -0.78
RBFOX1-201ENST00000311745 ZMYND8Q9ULU4 1186 aaPredicted RBP10.16□□□□□ -0.78
RBFOX1-201ENST00000311745 POLR2AP24928 1970 aaKnown RBP10.16□□□□□ -0.78
RBFOX1-201ENST00000311745 TARSL2A2RTX5 802 aaKnown RBP10.15□□□□□ -0.78
RBFOX1-201ENST00000311745 NFIBO00712 420 aa10.15□□□□□ -0.78
RBFOX1-201ENST00000311745 GALK1P51570 392 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms