RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 CA8P35219 290 aa11.98□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 SLC11A1P49279 550 aa11.98□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 AFF1P51825 1210 aaKnown RBP11.98□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 TUSC3Q13454 348 aa11.98□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 EPM2AIP1Q7L775 607 aaPredicted RBP11.98□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 ZNF280BQ86YH2 543 aa11.98□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 COLGALT2Q8IYK4 626 aa11.98□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 SLC39A11Q8N1S5 342 aa11.98□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 KIAA0895Q8NCT3 520 aa11.98□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 ZNF507Q8TCN5 953 aa11.98□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 POF1BQ8WVV4 589 aa11.98□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 PPP2R3CQ969Q6 453 aa11.98□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 MRPL38Q96DV4 380 aaKnown RBP11.98□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 FAM212AQ96EL1 285 aa11.98□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 HAPLN2Q9GZV7 340 aa11.98□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 PLEKHA5Q9HAU0 1116 aa11.98□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 ALG13Q9NP73 1137 aaKnown RBP11.98□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 ENTPD7Q9NQZ7 604 aa11.98□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 MIOSQ9NXC5 875 aa11.98□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 LMCD1Q9NZU5 365 aa11.98□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 CNTN3Q9P232 1028 aa11.98□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 STK39Q9UEW8 545 aa11.98□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 PLAGL2Q9UPG8 496 aa11.98□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 STXBP5LQ9Y2K9 1186 aa11.98□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 PRG3Q9Y2Y8 225 aaPredicted RBP11.98□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.98□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 STYXL1Q9Y6J8 313 aa11.98□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 CASTOR2A6NHX0 329 aa11.97□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 PTGESO14684 152 aa11.97□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 NRP1O14786 923 aa11.97□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 GRM6O15303 877 aa11.97□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 LPXNO60711 386 aa11.97□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 TNFSF9P41273 254 aa11.97□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 ACOT2P49753 483 aa11.97□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 SNRPFP62306 86 aaKnown RBP11.97□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 PLCB3Q01970 1234 aa11.97□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 DSC1Q08554 894 aa11.97□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 STK4Q13043 487 aa11.97□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 ADGRE1Q14246 886 aa11.97□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 KNOP1Q1ED39 458 aaKnown RBP11.97□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 BMT2Q1RMZ1 405 aa11.97□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 CD302Q8IX05 232 aa11.97□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 ELOA2Q8IYF1 753 aaPredicted RBP11.97□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 GPD1LQ8N335 351 aa11.97□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 GOLGA5Q8TBA6 731 aa11.97□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 SCFD1Q8WVM8 642 aa11.97□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 SAAL1Q96ER3 474 aa11.97□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 KIF12Q96FN5 646 aa11.97□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 UROC1Q96N76 676 aa11.97□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 GSDMAQ96QA5 445 aa11.97□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 COLEC11Q9BWP8 271 aa11.97□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 GTPBP4Q9BZE4 634 aaKnown RBP11.97□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 PCIF1Q9H4Z3 704 aa11.97□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 TLR9Q9NR96 1032 aa11.97□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 CGNQ9P2M7 1197 aaKnown RBP11.97□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 CPSF3Q9UKF6 684 aaKnown RBP11.97□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 LZTS1Q9Y250 596 aa11.97□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 PRRC2BQ5JSZ5 2229 aaKnown RBP11.96□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 SMIM28A0A1B0GU29 152 aa11.96□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 CALUO43852 315 aaPredicted RBP11.96□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 EXTL3O43909 919 aa11.96□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 IL18RAPO95256 599 aa11.96□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 KCNE1P15382 129 aa11.96□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 ZBTB41Q5SVQ8 909 aa11.96□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 PDE12Q6L8Q7 609 aaKnown RBP11.96□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 GSTCDQ8NEC7 633 aa11.96□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 MAFAQ8NHW3 353 aaPredicted RBP11.96□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 SPPL3Q8TCT6 385 aa11.96□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 MICAL1Q8TDZ2 1067 aa11.96□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 IGSF21Q96ID5 467 aa11.96□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 PPP1R10Q96QC0 940 aaKnown RBP11.96□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 TSPAN18Q96SJ8 248 aa11.96□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 CBWD1Q9BRT8 395 aa11.96□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 FAM213AQ9BRX8 229 aa11.96□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 IKZF4Q9H2S9 585 aa11.96□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 NSUN3Q9H649 340 aaKnown RBP11.96□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 KIAA1586Q9HCI6 787 aa11.96□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 AGPAT3Q9NRZ7 376 aa11.96□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 RBAKQ9NYW8 714 aaPredicted RBP11.96□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 MTCH2Q9Y6C9 303 aa11.96□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 VWA8A3KMH1 1905 aa11.96□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 SF3B1O75533 1304 aaKnown RBP eCLIP11.95□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 LAMA2P24043 3122 aaKnown RBP11.95□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 TTC26A0AVF1 554 aa11.95□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 CLIC2O15247 247 aa11.95□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 FAM189A1O60320 539 aa11.95□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 B4GALT3O60512 393 aa11.95□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 TADA2AO75478 443 aa11.95□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 POU3F3P20264 500 aaPredicted RBP11.95□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 ADSSP30520 456 aa11.95□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 CYP2J2P51589 502 aa11.95□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 POU5F1Q01860 360 aaKnown RBP11.95□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 STIM1Q13586 685 aa11.95□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 TMEM132DQ14C87 1099 aa11.95□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 SKIV2LQ15477 1246 aaKnown RBP11.95□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 ENOX2Q16206 610 aaKnown RBP11.95□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 SLC10A6Q3KNW5 377 aa11.95□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 XKR4Q5GH76 650 aa11.95□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 ZNF658Q5TYW1 1059 aaPredicted RBP11.95□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 PLPP4Q5VZY2 271 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms