RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 SNAI1O95863 264 aaPredicted RBP7.05□□□□□ -1.28
USP47-201ENST00000305481 HLA-DRAP01903 254 aa7.05□□□□□ -1.28
USP47-201ENST00000305481 TUBBP07437 444 aa7.05□□□□□ -1.28
USP47-201ENST00000305481 TNNI1P19237 187 aa7.05□□□□□ -1.28
USP47-201ENST00000305481 PAFAH1B1P43034 410 aa7.05□□□□□ -1.28
USP47-201ENST00000305481 SLC7A5Q01650 507 aa7.05□□□□□ -1.28
USP47-201ENST00000305481 GCNT1Q02742 428 aa7.05□□□□□ -1.28
USP47-201ENST00000305481 ZPBP2Q6X784 338 aa7.05□□□□□ -1.28
USP47-201ENST00000305481 CCNI2Q6ZMN8 369 aaPredicted RBP7.05□□□□□ -1.28
USP47-201ENST00000305481 RNF149Q8NC42 400 aa7.05□□□□□ -1.28
USP47-201ENST00000305481 FNBP1Q96RU3 617 aa7.05□□□□□ -1.28
USP47-201ENST00000305481 ACO2Q99798 780 aaKnown RBP7.05□□□□□ -1.28
USP47-201ENST00000305481 APOBEC3GQ9HC16 384 aaKnown RBP7.05□□□□□ -1.28
USP47-201ENST00000305481 SUCLA2Q9P2R7 463 aaPredicted RBP7.05□□□□□ -1.28
USP47-201ENST00000305481 TMEM59LQ9UK28 342 aa7.05□□□□□ -1.28
USP47-201ENST00000305481 PLXNB2O15031 1838 aa7.05□□□□□ -1.28
USP47-201ENST00000305481 PLXNA1Q9UIW2 1896 aa7.05□□□□□ -1.28
USP47-201ENST00000305481 RBM47A0AV96 593 aaKnown RBP7.05□□□□□ -1.28
USP47-201ENST00000305481 CLDN3O15551 220 aa7.05□□□□□ -1.28
USP47-201ENST00000305481 ZC3H11AO75152 810 aaKnown RBP eCLIP7.05□□□□□ -1.28
USP47-201ENST00000305481 RTN2O75298 545 aa7.05□□□□□ -1.28
USP47-201ENST00000305481 IQCF3P0C7M6 154 aa7.05□□□□□ -1.28
USP47-201ENST00000305481 EFNA5P52803 228 aa7.05□□□□□ -1.28
USP47-201ENST00000305481 MXD4Q14582 209 aaPredicted RBP7.05□□□□□ -1.28
USP47-201ENST00000305481 TCEAL1Q15170 157 aa7.05□□□□□ -1.28
USP47-201ENST00000305481 PEX26Q7Z412 305 aa7.05□□□□□ -1.28
USP47-201ENST00000305481 ANKRD23Q86SG2 305 aa7.05□□□□□ -1.28
USP47-201ENST00000305481 ZBTB33Q86T24 672 aa7.05□□□□□ -1.28
USP47-201ENST00000305481 RHPN2Q8IUC4 686 aa7.05□□□□□ -1.28
USP47-201ENST00000305481 GSPT2Q8IYD1 628 aaKnown RBP7.05□□□□□ -1.28
USP47-201ENST00000305481 CNPY4Q8N129 248 aa7.05□□□□□ -1.28
USP47-201ENST00000305481 USP38Q8NB14 1042 aa7.05□□□□□ -1.28
USP47-201ENST00000305481 GTF3C2Q8WUA4 911 aaPredicted RBP7.05□□□□□ -1.28
USP47-201ENST00000305481 TCP11Q8WWU5 503 aa7.05□□□□□ -1.28
USP47-201ENST00000305481 MINDY3Q9H8M7 445 aa7.05□□□□□ -1.28
USP47-201ENST00000305481 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.04□□□□□ -1.28
USP47-201ENST00000305481 B4GALT5O43286 388 aa7.04□□□□□ -1.28
USP47-201ENST00000305481 ERLIN1O75477 346 aa7.04□□□□□ -1.28
USP47-201ENST00000305481 TOM1L1O75674 476 aa7.04□□□□□ -1.28
USP47-201ENST00000305481 LDHAP00338 332 aaKnown RBP7.04□□□□□ -1.28
USP47-201ENST00000305481 GZMAP12544 262 aa7.04□□□□□ -1.28
USP47-201ENST00000305481 ADCYAP1R1P41586 468 aa7.04□□□□□ -1.28
USP47-201ENST00000305481 SLC26A2P50443 739 aa7.04□□□□□ -1.28
USP47-201ENST00000305481 CCNA1P78396 465 aa7.04□□□□□ -1.28
USP47-201ENST00000305481 CDR2Q01850 454 aa7.04□□□□□ -1.28
USP47-201ENST00000305481 DCAF12L1Q5VU92 463 aa7.04□□□□□ -1.28
USP47-201ENST00000305481 LMBR1Q8WVP7 490 aa7.04□□□□□ -1.28
USP47-201ENST00000305481 GBA2Q9HCG7 927 aaPredicted RBP7.04□□□□□ -1.28
USP47-201ENST00000305481 PTPRHQ9HD43 1115 aa7.04□□□□□ -1.28
USP47-201ENST00000305481 PRDM10Q9NQV6 1147 aa7.04□□□□□ -1.28
USP47-201ENST00000305481 TRPC6Q9Y210 931 aa7.04□□□□□ -1.28
USP47-201ENST00000305481 DDX3YO15523 660 aaKnown RBP7.04□□□□□ -1.28
USP47-201ENST00000305481 ATMINO43313 823 aaPredicted RBP7.04□□□□□ -1.28
USP47-201ENST00000305481 GAS2O43903 313 aaKnown RBP7.04□□□□□ -1.28
USP47-201ENST00000305481 HBP1O60381 514 aa7.04□□□□□ -1.28
USP47-201ENST00000305481 C22orf31O95567 290 aa7.04□□□□□ -1.28
USP47-201ENST00000305481 LGALS2P05162 132 aa7.04□□□□□ -1.28
USP47-201ENST00000305481 HARSP12081 509 aaKnown RBP7.04□□□□□ -1.28
USP47-201ENST00000305481 ACO1P21399 889 aaKnown RBP7.04□□□□□ -1.28
USP47-201ENST00000305481 PROZP22891 400 aa7.04□□□□□ -1.28
USP47-201ENST00000305481 CLCN3P51790 818 aa7.04□□□□□ -1.28
USP47-201ENST00000305481 HADHBP55084 474 aaKnown RBP7.04□□□□□ -1.28
USP47-201ENST00000305481 CASP8Q14790 479 aa7.04□□□□□ -1.28
USP47-201ENST00000305481 SPRYD7Q5W111 196 aa7.04□□□□□ -1.28
USP47-201ENST00000305481 EFCAB12Q6NXP0 572 aa7.04□□□□□ -1.28
USP47-201ENST00000305481 ABRAQ8N0Z2 381 aa7.04□□□□□ -1.28
USP47-201ENST00000305481 ACTRT1Q8TDG2 376 aa7.04□□□□□ -1.28
USP47-201ENST00000305481 ZBTB9Q96C00 473 aa7.04□□□□□ -1.28
USP47-201ENST00000305481 CGRRF1Q99675 332 aa7.04□□□□□ -1.28
USP47-201ENST00000305481 MRPL4Q9BYD3 311 aaKnown RBP7.04□□□□□ -1.28
USP47-201ENST00000305481 FZD8Q9H461 694 aa7.04□□□□□ -1.28
USP47-201ENST00000305481 TMEM51Q9NW97 253 aa7.04□□□□□ -1.28
USP47-201ENST00000305481 UMODL1Q5DID0 1318 aa7.04□□□□□ -1.28
USP47-201ENST00000305481 STRNO43815 780 aa7.04□□□□□ -1.28
USP47-201ENST00000305481 CST3P01034 146 aaPredicted RBP7.04□□□□□ -1.28
USP47-201ENST00000305481 PRKCBP05771 671 aa7.04□□□□□ -1.28
USP47-201ENST00000305481 INSRRP14616 1297 aa7.04□□□□□ -1.28
USP47-201ENST00000305481 PIK3CAP42336 1068 aa7.04□□□□□ -1.28
USP47-201ENST00000305481 GCLCP48506 637 aaPredicted RBP7.04□□□□□ -1.28
USP47-201ENST00000305481 MCL1Q07820 350 aa7.04□□□□□ -1.28
USP47-201ENST00000305481 BIRC3Q13489 604 aa7.04□□□□□ -1.28
USP47-201ENST00000305481 LAMC2Q13753 1193 aa7.04□□□□□ -1.28
USP47-201ENST00000305481 MAPK6Q16659 721 aa7.04□□□□□ -1.28
USP47-201ENST00000305481 CST9Q5W186 159 aa7.04□□□□□ -1.28
USP47-201ENST00000305481 HDXQ7Z353 690 aa7.04□□□□□ -1.28
USP47-201ENST00000305481 GPR142Q7Z601 462 aa7.04□□□□□ -1.28
USP47-201ENST00000305481 SYCE1Q8N0S2 351 aa7.04□□□□□ -1.28
USP47-201ENST00000305481 RASGEF1CQ8N431 466 aa7.04□□□□□ -1.28
USP47-201ENST00000305481 AFG1LQ8WV93 481 aa7.04□□□□□ -1.28
USP47-201ENST00000305481 PBKQ96KB5 322 aa7.04□□□□□ -1.28
USP47-201ENST00000305481 C16orf70Q9BSU1 422 aa7.04□□□□□ -1.28
USP47-201ENST00000305481 RRAGCQ9HB90 399 aa7.04□□□□□ -1.28
USP47-201ENST00000305481 IFT122Q9HBG6 1241 aa7.04□□□□□ -1.28
USP47-201ENST00000305481 C1orf112Q9NSG2 853 aa7.04□□□□□ -1.28
USP47-201ENST00000305481 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.04□□□□□ -1.28
USP47-201ENST00000305481 ERAP1Q9NZ08 941 aa7.04□□□□□ -1.28
USP47-201ENST00000305481 NUB1Q9Y5A7 615 aa7.04□□□□□ -1.28
USP47-201ENST00000305481 ADCY6O43306 1168 aa7.03□□□□□ -1.28
USP47-201ENST00000305481 CEP104O60308 925 aa7.03□□□□□ -1.28
USP47-201ENST00000305481 CELF2O95319 508 aaKnown RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms