RNA–Protein interactions for RNA: ENST00000304990.8

COL4A3-201, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-201ENST00000304990 SPTBN2O15020 2390 aa11.21□□□□□ -0.62
COL4A3-201ENST00000304990 FRYLO94915 3013 aa11.2□□□□□ -0.62
COL4A3-201ENST00000304990 CHURC1-FNTBB4DL54 471 aa11.2□□□□□ -0.62
COL4A3-201ENST00000304990 PRPF3O43395 683 aaKnown RBP11.2□□□□□ -0.62
COL4A3-201ENST00000304990 NPTXRO95502 500 aa11.2□□□□□ -0.62
COL4A3-201ENST00000304990 TDP2O95551 362 aa11.2□□□□□ -0.62
COL4A3-201ENST00000304990 LRG1P02750 347 aa11.2□□□□□ -0.62
COL4A3-201ENST00000304990 CNR2P34972 360 aa11.2□□□□□ -0.62
COL4A3-201ENST00000304990 FNTBP49356 437 aa11.2□□□□□ -0.62
COL4A3-201ENST00000304990 RCAN1P53805 252 aa11.2□□□□□ -0.62
COL4A3-201ENST00000304990 ELAVL2Q12926 359 aaKnown RBP11.2□□□□□ -0.62
COL4A3-201ENST00000304990 TUSC3Q13454 348 aa11.2□□□□□ -0.62
COL4A3-201ENST00000304990 MXD4Q14582 209 aaPredicted RBP11.2□□□□□ -0.62
COL4A3-201ENST00000304990 ACAP1Q15027 740 aa11.2□□□□□ -0.62
COL4A3-201ENST00000304990 TMEM132AQ24JP5 1023 aa11.2□□□□□ -0.62
COL4A3-201ENST00000304990 UVSSAQ2YD98 709 aa11.2□□□□□ -0.62
COL4A3-201ENST00000304990 XKR9Q5GH70 373 aa11.2□□□□□ -0.62
COL4A3-201ENST00000304990 TANGO2Q6ICL3 276 aa11.2□□□□□ -0.62
COL4A3-201ENST00000304990 FERMT3Q86UX7 667 aa11.2□□□□□ -0.62
COL4A3-201ENST00000304990 ZNF579Q8NAF0 562 aaKnown RBP11.2□□□□□ -0.62
COL4A3-201ENST00000304990 LNX1Q8TBB1 728 aaPredicted RBP11.2□□□□□ -0.62
COL4A3-201ENST00000304990 IRF7Q92985 503 aa11.2□□□□□ -0.62
COL4A3-201ENST00000304990 ESYT1Q9BSJ8 1104 aa11.2□□□□□ -0.62
COL4A3-201ENST00000304990 TRMT61BQ9BVS5 477 aaKnown RBP11.2□□□□□ -0.62
COL4A3-201ENST00000304990 SLC26A6Q9BXS9 759 aa11.2□□□□□ -0.62
COL4A3-201ENST00000304990 DHX33Q9H6R0 707 aaKnown RBP11.2□□□□□ -0.62
COL4A3-201ENST00000304990 ZFP14Q9HCL3 533 aa11.2□□□□□ -0.62
COL4A3-201ENST00000304990 GDE1Q9NZC3 331 aa11.2□□□□□ -0.62
COL4A3-201ENST00000304990 VPS54Q9P1Q0 977 aa11.2□□□□□ -0.62
COL4A3-201ENST00000304990 CACNA1GO43497 2377 aa11.19□□□□□ -0.62
COL4A3-201ENST00000304990 KIF4AO95239 1232 aa11.19□□□□□ -0.62
COL4A3-201ENST00000304990 P4HBP07237 508 aaKnown RBP11.19□□□□□ -0.62
COL4A3-201ENST00000304990 RHOP08100 348 aa11.19□□□□□ -0.62
COL4A3-201ENST00000304990 PMLP29590 882 aa11.19□□□□□ -0.62
COL4A3-201ENST00000304990 GDI1P31150 447 aa11.19□□□□□ -0.62
COL4A3-201ENST00000304990 YWHABP31946 246 aaKnown RBP11.19□□□□□ -0.62
COL4A3-201ENST00000304990 ELF1P32519 619 aa11.19□□□□□ -0.62
COL4A3-201ENST00000304990 OR1D2P34982 312 aa11.19□□□□□ -0.62
COL4A3-201ENST00000304990 EXOSC10Q01780 885 aaKnown RBP11.19□□□□□ -0.62
COL4A3-201ENST00000304990 SATB1Q01826 763 aa11.19□□□□□ -0.62
COL4A3-201ENST00000304990 SRSF5Q13243 272 aaKnown RBP11.19□□□□□ -0.62
COL4A3-201ENST00000304990 FZD5Q13467 585 aa11.19□□□□□ -0.62
COL4A3-201ENST00000304990 SLC27A1Q6PCB7 646 aa11.19□□□□□ -0.62
COL4A3-201ENST00000304990 CDR2LQ86X02 465 aaPredicted RBP11.19□□□□□ -0.62
COL4A3-201ENST00000304990 CCDC43Q96MW1 224 aaKnown RBP11.19□□□□□ -0.62
COL4A3-201ENST00000304990 PAAF1Q9BRP4 392 aa11.19□□□□□ -0.62
COL4A3-201ENST00000304990 DDX25Q9UHL0 483 aaKnown RBP11.19□□□□□ -0.62
COL4A3-201ENST00000304990 NOTCH4Q99466 2003 aa11.19□□□□□ -0.62
COL4A3-201ENST00000304990 GPR179Q6PRD1 2367 aa11.19□□□□□ -0.62
COL4A3-201ENST00000304990 GREB1Q4ZG55 1949 aa11.19□□□□□ -0.62
COL4A3-201ENST00000304990 PRRG1O14668 218 aa11.18□□□□□ -0.62
COL4A3-201ENST00000304990 AXIN1O15169 862 aa11.18□□□□□ -0.62
COL4A3-201ENST00000304990 ADAM12O43184 909 aa11.18□□□□□ -0.62
COL4A3-201ENST00000304990 HRO43593 1189 aa11.18□□□□□ -0.62
COL4A3-201ENST00000304990 PROS1P07225 676 aa11.18□□□□□ -0.62
COL4A3-201ENST00000304990 POU2F2P09086 479 aa11.18□□□□□ -0.62
COL4A3-201ENST00000304990 TDGF1P13385 188 aa11.18□□□□□ -0.62
COL4A3-201ENST00000304990 CEBPBP17676 345 aa11.18□□□□□ -0.62
COL4A3-201ENST00000304990 PTPN2P17706 415 aa11.18□□□□□ -0.62
COL4A3-201ENST00000304990 ARF4P18085 180 aaPredicted RBP11.18□□□□□ -0.62
COL4A3-201ENST00000304990 PTENP60484 403 aa11.18□□□□□ -0.62
COL4A3-201ENST00000304990 RAB33AQ14088 237 aa11.18□□□□□ -0.62
COL4A3-201ENST00000304990 LRRC32Q14392 662 aa11.18□□□□□ -0.62
COL4A3-201ENST00000304990 MAMSTRQ6ZN01 415 aa11.18□□□□□ -0.62
COL4A3-201ENST00000304990 LONP2Q86WA8 852 aa11.18□□□□□ -0.62
COL4A3-201ENST00000304990 YAF2Q8IY57 180 aa11.18□□□□□ -0.62
COL4A3-201ENST00000304990 FAM160A2Q8N612 972 aaPredicted RBP11.18□□□□□ -0.62
COL4A3-201ENST00000304990 FAM200AQ8TCP9 573 aa11.18□□□□□ -0.62
COL4A3-201ENST00000304990 CSGALNACT1Q8TDX6 532 aa11.18□□□□□ -0.62
COL4A3-201ENST00000304990 CORO1BQ9BR76 489 aa11.18□□□□□ -0.62
COL4A3-201ENST00000304990 GTF3C3Q9Y5Q9 886 aa11.18□□□□□ -0.62
COL4A3-201ENST00000304990 CDY1Q9Y6F8 540 aa11.18□□□□□ -0.62
COL4A3-201ENST00000304990 PIAS3Q9Y6X2 628 aa11.18□□□□□ -0.62
COL4A3-201ENST00000304990 VWA8A3KMH1 1905 aa11.17□□□□□ -0.62
COL4A3-201ENST00000304990 EML1O00423 815 aa11.17□□□□□ -0.62
COL4A3-201ENST00000304990 ZNF197O14709 1029 aa11.17□□□□□ -0.62
COL4A3-201ENST00000304990 ZNF263O14978 683 aa11.17□□□□□ -0.62
COL4A3-201ENST00000304990 EDIL3O43854 480 aa11.17□□□□□ -0.62
COL4A3-201ENST00000304990 THP07101 528 aa11.17□□□□□ -0.62
COL4A3-201ENST00000304990 HMGB1P09429 215 aaKnown RBP11.17□□□□□ -0.62
COL4A3-201ENST00000304990 KPNA1P52294 538 aaPredicted RBP11.17□□□□□ -0.62
COL4A3-201ENST00000304990 SHC2P98077 582 aa11.17□□□□□ -0.62
COL4A3-201ENST00000304990 MBTD1Q05BQ5 628 aa11.17□□□□□ -0.62
COL4A3-201ENST00000304990 KRT32Q14532 448 aa11.17□□□□□ -0.62
COL4A3-201ENST00000304990 SF3A2Q15428 464 aaKnown RBP11.17□□□□□ -0.62
COL4A3-201ENST00000304990 CCDC6Q16204 474 aa11.17□□□□□ -0.62
COL4A3-201ENST00000304990 SLC5A9Q2M3M2 681 aa11.17□□□□□ -0.62
COL4A3-201ENST00000304990 PPP4R3AQ6IN85 833 aa11.17□□□□□ -0.62
COL4A3-201ENST00000304990 B3GNT9Q6UX72 402 aa11.17□□□□□ -0.62
COL4A3-201ENST00000304990 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.17□□□□□ -0.62
COL4A3-201ENST00000304990 PDZD4Q76G19 769 aaPredicted RBP11.17□□□□□ -0.62
COL4A3-201ENST00000304990 RTL10Q7L3V2 364 aa11.17□□□□□ -0.62
COL4A3-201ENST00000304990 ELMOD1Q8N336 334 aa11.17□□□□□ -0.62
COL4A3-201ENST00000304990 SPEM1Q8N4L4 309 aa11.17□□□□□ -0.62
COL4A3-201ENST00000304990 GSTCDQ8NEC7 633 aa11.17□□□□□ -0.62
COL4A3-201ENST00000304990 ETNPPLQ8TBG4 499 aa11.17□□□□□ -0.62
COL4A3-201ENST00000304990 LXNQ9BS40 222 aa11.17□□□□□ -0.62
COL4A3-201ENST00000304990 RNF26Q9BY78 433 aaPredicted RBP11.17□□□□□ -0.62
COL4A3-201ENST00000304990 ARRDC1-AS1Q9H2J1 176 aa11.17□□□□□ -0.62
COL4A3-201ENST00000304990 ZNF334Q9HCZ1 680 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms