RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 NDUFA10O95299 355 aa14.05□□□□□ -0.16
CCDC7-202ENST00000302316 PLEKP08567 350 aaPredicted RBP14.05□□□□□ -0.16
CCDC7-202ENST00000302316 MRPS6P82932 125 aaKnown RBP14.05□□□□□ -0.16
CCDC7-202ENST00000302316 SURF1Q15526 300 aa14.05□□□□□ -0.16
CCDC7-202ENST00000302316 ENOX2Q16206 610 aaKnown RBP14.05□□□□□ -0.16
CCDC7-202ENST00000302316 ZACNQ401N2 412 aa14.05□□□□□ -0.16
CCDC7-202ENST00000302316 SLC9C1Q4G0N8 1177 aa14.05□□□□□ -0.16
CCDC7-202ENST00000302316 TDRD10Q5VZ19 366 aaKnown RBP14.05□□□□□ -0.16
CCDC7-202ENST00000302316 PHLDB3Q6NSJ2 640 aa14.05□□□□□ -0.16
CCDC7-202ENST00000302316 C15orf39Q6ZRI6 1047 aa14.05□□□□□ -0.16
CCDC7-202ENST00000302316 WDR49Q8IV35 697 aa14.05□□□□□ -0.16
CCDC7-202ENST00000302316 ARHGEF19Q8IW93 802 aa14.05□□□□□ -0.16
CCDC7-202ENST00000302316 CCDC170Q8IYT3 715 aa14.05□□□□□ -0.16
CCDC7-202ENST00000302316 ACRBPQ8NEB7 543 aa14.05□□□□□ -0.16
CCDC7-202ENST00000302316 TMEM40Q8WWA1 233 aa14.05□□□□□ -0.16
CCDC7-202ENST00000302316 CCDC42Q96M95 316 aa14.05□□□□□ -0.16
CCDC7-202ENST00000302316 C16orf45Q96MC5 204 aaPredicted RBP14.05□□□□□ -0.16
CCDC7-202ENST00000302316 DEF6Q9H4E7 631 aa14.05□□□□□ -0.16
CCDC7-202ENST00000302316 RPF1Q9H9Y2 349 aaKnown RBP14.05□□□□□ -0.16
CCDC7-202ENST00000302316 AIPL1Q9NZN9 384 aa14.05□□□□□ -0.16
CCDC7-202ENST00000302316 EPN1Q9Y6I3 576 aaPredicted RBP14.05□□□□□ -0.16
CCDC7-202ENST00000302316 GRIN2DO15399 1336 aa14.04□□□□□ -0.16
CCDC7-202ENST00000302316 F8VZ95 297 aa14.04□□□□□ -0.16
CCDC7-202ENST00000302316 C4BPAP04003 597 aaKnown RBP14.04□□□□□ -0.16
CCDC7-202ENST00000302316 SERPING1P05155 500 aa14.04□□□□□ -0.16
CCDC7-202ENST00000302316 STAG3L1P0CL83 205 aa14.04□□□□□ -0.16
CCDC7-202ENST00000302316 CXCL8P10145 99 aa14.04□□□□□ -0.16
CCDC7-202ENST00000302316 STAT1P42224 750 aa14.04□□□□□ -0.16
CCDC7-202ENST00000302316 PIK3CAP42336 1068 aa14.04□□□□□ -0.16
CCDC7-202ENST00000302316 ITGA7Q13683 1181 aa14.04□□□□□ -0.16
CCDC7-202ENST00000302316 ARHGAP44Q17R89 818 aa14.04□□□□□ -0.16
CCDC7-202ENST00000302316 DCAF4L1Q3SXM0 396 aa14.04□□□□□ -0.16
CCDC7-202ENST00000302316 HGSNATQ68CP4 663 aa14.04□□□□□ -0.16
CCDC7-202ENST00000302316 SERINC5Q86VE9 423 aa14.04□□□□□ -0.16
CCDC7-202ENST00000302316 TMEM192Q8IY95 271 aa14.04□□□□□ -0.16
CCDC7-202ENST00000302316 GLT1D1Q96MS3 346 aa14.04□□□□□ -0.16
CCDC7-202ENST00000302316 NT5C1BQ96P26 610 aa14.04□□□□□ -0.16
CCDC7-202ENST00000302316 STK33Q9BYT3 514 aa14.04□□□□□ -0.16
CCDC7-202ENST00000302316 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.04□□□□□ -0.16
CCDC7-202ENST00000302316 UBE2TQ9NPD8 197 aaPredicted RBP14.04□□□□□ -0.16
CCDC7-202ENST00000302316 FRMPD3Q5JV73 1810 aa14.04□□□□□ -0.16
CCDC7-202ENST00000302316 IPO7O95373 1038 aaKnown RBP14.03□□□□□ -0.16
CCDC7-202ENST00000302316 CLTAP09496 248 aa14.03□□□□□ -0.16
CCDC7-202ENST00000302316 EIF4A3P38919 411 aaKnown RBP14.03□□□□□ -0.16
CCDC7-202ENST00000302316 AP3M2P53677 418 aa14.03□□□□□ -0.16
CCDC7-202ENST00000302316 DRAP1Q14919 205 aaPredicted RBP14.03□□□□□ -0.16
CCDC7-202ENST00000302316 PTGISQ16647 500 aa14.03□□□□□ -0.16
CCDC7-202ENST00000302316 KYAT1Q16773 422 aa14.03□□□□□ -0.16
CCDC7-202ENST00000302316 DNTTIP2Q5QJE6 756 aaKnown RBP14.03□□□□□ -0.16
CCDC7-202ENST00000302316 NOTUMQ6P988 496 aa14.03□□□□□ -0.16
CCDC7-202ENST00000302316 APBB1IPQ7Z5R6 666 aaPredicted RBP14.03□□□□□ -0.16
CCDC7-202ENST00000302316 OR5B17Q8NGF7 314 aa14.03□□□□□ -0.16
CCDC7-202ENST00000302316 WNT8BQ93098 351 aa14.03□□□□□ -0.16
CCDC7-202ENST00000302316 CELF4Q9BZC1 486 aaKnown RBP14.03□□□□□ -0.16
CCDC7-202ENST00000302316 WBP1LQ9NX94 342 aa14.03□□□□□ -0.16
CCDC7-202ENST00000302316 PTPN22Q9Y2R2 807 aa14.03□□□□□ -0.16
CCDC7-202ENST00000302316 TRPV2Q9Y5S1 764 aa14.03□□□□□ -0.16
CCDC7-202ENST00000302316 CDY2AQ9Y6F7 541 aa14.03□□□□□ -0.16
CCDC7-202ENST00000302316 PHACTR2O75167 634 aa14.03□□□□□ -0.16
CCDC7-202ENST00000302316 IL18RAPO95256 599 aa14.03□□□□□ -0.16
CCDC7-202ENST00000302316 NPTXRO95502 500 aa14.03□□□□□ -0.16
CCDC7-202ENST00000302316 HLA-DRAP01903 254 aa14.03□□□□□ -0.16
CCDC7-202ENST00000302316 RPLP2P05387 115 aaKnown RBP14.03□□□□□ -0.16
CCDC7-202ENST00000302316 CTSHP09668 335 aa14.03□□□□□ -0.16
CCDC7-202ENST00000302316 PNMA6AP0CW24 399 aaPredicted RBP14.03□□□□□ -0.16
CCDC7-202ENST00000302316 HOXA11P31270 313 aaPredicted RBP14.03□□□□□ -0.16
CCDC7-202ENST00000302316 KLHL30Q0D2K2 578 aa14.03□□□□□ -0.16
CCDC7-202ENST00000302316 SLC27A1Q6PCB7 646 aa14.03□□□□□ -0.16
CCDC7-202ENST00000302316 REXO1L1PQ8IX06 675 aa14.03□□□□□ -0.16
CCDC7-202ENST00000302316 PPM1KQ8N3J5 372 aa14.03□□□□□ -0.16
CCDC7-202ENST00000302316 TSEN34Q9BSV6 310 aaKnown RBP14.03□□□□□ -0.16
CCDC7-202ENST00000302316 MTMR12Q9C0I1 747 aa14.03□□□□□ -0.16
CCDC7-202ENST00000302316 PIN4Q9Y237 131 aaKnown RBP14.03□□□□□ -0.16
CCDC7-202ENST00000302316 NOD1Q9Y239 953 aa14.03□□□□□ -0.16
CCDC7-202ENST00000302316 SSU72P8A0A1W2PR75 194 aa14.02□□□□□ -0.16
CCDC7-202ENST00000302316 GOLGA6L9A6NEM1 432 aa14.02□□□□□ -0.16
CCDC7-202ENST00000302316 AKR1B10O60218 316 aa14.02□□□□□ -0.16
CCDC7-202ENST00000302316 CLSTN1O94985 981 aa14.02□□□□□ -0.16
CCDC7-202ENST00000302316 TMEM191BP0C7N4 346 aa14.02□□□□□ -0.16
CCDC7-202ENST00000302316 AXLP30530 894 aa14.02□□□□□ -0.16
CCDC7-202ENST00000302316 SOX5P35711 763 aa14.02□□□□□ -0.16
CCDC7-202ENST00000302316 KIF11P52732 1056 aa14.02□□□□□ -0.16
CCDC7-202ENST00000302316 ARRDC4Q8NCT1 418 aa14.02□□□□□ -0.16
CCDC7-202ENST00000302316 PI4K2AQ9BTU6 479 aa14.02□□□□□ -0.16
CCDC7-202ENST00000302316 C1orf112Q9NSG2 853 aa14.02□□□□□ -0.16
CCDC7-202ENST00000302316 EIF3CLB5ME19 914 aaKnown RBP14.02□□□□□ -0.17
CCDC7-202ENST00000302316 B4GALT4O60513 344 aa14.02□□□□□ -0.17
CCDC7-202ENST00000302316 ZC3H11AO75152 810 aaKnown RBP eCLIP14.02□□□□□ -0.17
CCDC7-202ENST00000302316 GFPT2O94808 682 aa14.02□□□□□ -0.17
CCDC7-202ENST00000302316 VNN1O95497 513 aa14.02□□□□□ -0.17
CCDC7-202ENST00000302316 FERP16591 822 aa14.02□□□□□ -0.17
CCDC7-202ENST00000302316 TFAMQ00059 246 aaKnown RBP14.02□□□□□ -0.17
CCDC7-202ENST00000302316 PTPN11Q06124 597 aaPredicted RBP14.02□□□□□ -0.17
CCDC7-202ENST00000302316 MAPK8IP2Q13387 824 aaPredicted RBP14.02□□□□□ -0.17
CCDC7-202ENST00000302316 DUOXA2Q1HG44 320 aa14.02□□□□□ -0.17
CCDC7-202ENST00000302316 WDR44Q5JSH3 913 aa14.02□□□□□ -0.17
CCDC7-202ENST00000302316 IRF2BP2Q7Z5L9 587 aa14.02□□□□□ -0.17
CCDC7-202ENST00000302316 FMNL3Q8IVF7 1028 aa14.02□□□□□ -0.17
CCDC7-202ENST00000302316 EFCAB13Q8IY85 973 aa14.02□□□□□ -0.17
CCDC7-202ENST00000302316 EIF3CQ99613 913 aaKnown RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms