RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 MAGEA10P43363 369 aaPredicted RBP10.32□□□□□ -0.76
RFX3-201ENST00000302303 GATMP50440 423 aa10.32□□□□□ -0.76
RFX3-201ENST00000302303 WDR5P61964 334 aaKnown RBP10.32□□□□□ -0.76
RFX3-201ENST00000302303 PPP3CAQ08209 521 aa10.32□□□□□ -0.76
RFX3-201ENST00000302303 PSMD6Q15008 389 aa10.32□□□□□ -0.76
RFX3-201ENST00000302303 TCP11X2Q5H9J9 407 aa10.32□□□□□ -0.76
RFX3-201ENST00000302303 FRMD5Q7Z6J6 570 aa10.32□□□□□ -0.76
RFX3-201ENST00000302303 EFCAB13Q8IY85 973 aa10.32□□□□□ -0.76
RFX3-201ENST00000302303 FAM186BQ8IYM0 893 aa10.32□□□□□ -0.76
RFX3-201ENST00000302303 HERVK_113Q902F9 699 aa10.32□□□□□ -0.76
RFX3-201ENST00000302303 TOP1MTQ969P6 601 aa10.32□□□□□ -0.76
RFX3-201ENST00000302303 SLC35C1Q96A29 364 aa10.32□□□□□ -0.76
RFX3-201ENST00000302303 SNX27Q96L92 541 aa10.32□□□□□ -0.76
RFX3-201ENST00000302303 CNOT6LQ96LI5 555 aaKnown RBP10.32□□□□□ -0.76
RFX3-201ENST00000302303 ZFP42Q96MM3 310 aa10.32□□□□□ -0.76
RFX3-201ENST00000302303 ACAP3Q96P50 834 aa10.32□□□□□ -0.76
RFX3-201ENST00000302303 ANP32EQ9BTT0 268 aa10.32□□□□□ -0.76
RFX3-201ENST00000302303 RC3H2Q9HBD1 1191 aaKnown RBP10.32□□□□□ -0.76
RFX3-201ENST00000302303 TMEM161AQ9NX61 479 aa10.32□□□□□ -0.76
RFX3-201ENST00000302303 KLK14Q9P0G3 267 aa10.32□□□□□ -0.76
RFX3-201ENST00000302303 CNTN3Q9P232 1028 aa10.32□□□□□ -0.76
RFX3-201ENST00000302303 PRKAG2Q9UGJ0 569 aa10.32□□□□□ -0.76
RFX3-201ENST00000302303 ANK1P16157 1881 aa10.31□□□□□ -0.76
RFX3-201ENST00000302303 LAMA3Q16787 3333 aa10.31□□□□□ -0.76
RFX3-201ENST00000302303 ARL5CA6NH57 179 aa10.31□□□□□ -0.76
RFX3-201ENST00000302303 SMTNL1A8MU46 457 aa10.31□□□□□ -0.76
RFX3-201ENST00000302303 H0YGN5 161 aa10.31□□□□□ -0.76
RFX3-201ENST00000302303 B4GALT3O60512 393 aa10.31□□□□□ -0.76
RFX3-201ENST00000302303 FGFR1P11362 822 aa10.31□□□□□ -0.76
RFX3-201ENST00000302303 KCNE1P15382 129 aa10.31□□□□□ -0.76
RFX3-201ENST00000302303 IGFBP6P24592 240 aaPredicted RBP10.31□□□□□ -0.76
RFX3-201ENST00000302303 MATR3P43243 847 aaKnown RBP eCLIP10.31□□□□□ -0.762e-9■■■□□ 18.9
RFX3-201ENST00000302303 RAB27AP51159 221 aa10.31□□□□□ -0.76
RFX3-201ENST00000302303 SPAG1Q07617 926 aa10.31□□□□□ -0.76
RFX3-201ENST00000302303 BFSP1Q12934 665 aa10.31□□□□□ -0.76
RFX3-201ENST00000302303 TMEM132AQ24JP5 1023 aa10.31□□□□□ -0.76
RFX3-201ENST00000302303 C9orf50Q5SZB4 431 aa10.31□□□□□ -0.76
RFX3-201ENST00000302303 C15orf39Q6ZRI6 1047 aa10.31□□□□□ -0.76
RFX3-201ENST00000302303 OR5B17Q8NGF7 314 aa10.31□□□□□ -0.76
RFX3-201ENST00000302303 TMC2Q8TDI7 906 aa10.31□□□□□ -0.76
RFX3-201ENST00000302303 NOC3LQ8WTT2 800 aaKnown RBP10.31□□□□□ -0.76
RFX3-201ENST00000302303 ZNF689Q96CS4 500 aaPredicted RBP10.31□□□□□ -0.76
RFX3-201ENST00000302303 NAP1L5Q96NT1 182 aaPredicted RBP10.31□□□□□ -0.76
RFX3-201ENST00000302303 CASD1Q96PB1 797 aa10.31□□□□□ -0.76
RFX3-201ENST00000302303 GAD1Q99259 594 aa10.31□□□□□ -0.76
RFX3-201ENST00000302303 APOL6Q9BWW8 343 aa10.31□□□□□ -0.76
RFX3-201ENST00000302303 PLEKHA5Q9HAU0 1116 aa10.31□□□□□ -0.76
RFX3-201ENST00000302303 TOPORSQ9NS56 1045 aaPredicted RBP10.31□□□□□ -0.76
RFX3-201ENST00000302303 INTS13Q9NVM9 706 aa10.31□□□□□ -0.76
RFX3-201ENST00000302303 RBAKQ9NYW8 714 aaPredicted RBP10.31□□□□□ -0.76
RFX3-201ENST00000302303 LIMA1Q9UHB6 759 aaKnown RBP10.31□□□□□ -0.76
RFX3-201ENST00000302303 GIT1Q9Y2X7 761 aa10.31□□□□□ -0.76
RFX3-201ENST00000302303 NR2E3Q9Y5X4 410 aa10.31□□□□□ -0.76
RFX3-201ENST00000302303 SMIM28A0A1B0GU29 152 aa10.3□□□□□ -0.76
RFX3-201ENST00000302303 KCNJ18B7U540 433 aa10.3□□□□□ -0.76
RFX3-201ENST00000302303 LRRN2O75325 713 aa10.3□□□□□ -0.76
RFX3-201ENST00000302303 DGKIO75912 1065 aa10.3□□□□□ -0.76
RFX3-201ENST00000302303 BAIAP3O94812 1187 aa10.3□□□□□ -0.76
RFX3-201ENST00000302303 GNA14O95837 355 aa10.3□□□□□ -0.76
RFX3-201ENST00000302303 C4BPAP04003 597 aaKnown RBP10.3□□□□□ -0.76
RFX3-201ENST00000302303 NFICP08651 508 aa10.3□□□□□ -0.76
RFX3-201ENST00000302303 TRIM49P0CI25 452 aa10.3□□□□□ -0.76
RFX3-201ENST00000302303 TRIM49CP0CI26 452 aa10.3□□□□□ -0.76
RFX3-201ENST00000302303 ITGA4P13612 1032 aa10.3□□□□□ -0.76
RFX3-201ENST00000302303 MLH1P40692 756 aa10.3□□□□□ -0.76
RFX3-201ENST00000302303 VAMP7P51809 220 aa10.3□□□□□ -0.76
RFX3-201ENST00000302303 SOX4Q06945 474 aaPredicted RBP10.3□□□□□ -0.76
RFX3-201ENST00000302303 ENPEPQ07075 957 aa10.3□□□□□ -0.76
RFX3-201ENST00000302303 KCNJ12Q14500 433 aa10.3□□□□□ -0.76
RFX3-201ENST00000302303 KRT31Q15323 416 aa10.3□□□□□ -0.76
RFX3-201ENST00000302303 SHHQ15465 462 aa10.3□□□□□ -0.76
RFX3-201ENST00000302303 KYAT1Q16773 422 aa10.3□□□□□ -0.76
RFX3-201ENST00000302303 JADE1Q6IE81 842 aa10.3□□□□□ -0.76
RFX3-201ENST00000302303 DPY19L2P1Q6NXN4 242 aa10.3□□□□□ -0.76
RFX3-201ENST00000302303 PPP1R10Q96QC0 940 aaKnown RBP10.3□□□□□ -0.76
RFX3-201ENST00000302303 CCDC94Q9BW85 323 aaPredicted RBP10.3□□□□□ -0.76
RFX3-201ENST00000302303 TRIM6Q9C030 488 aaPredicted RBP10.3□□□□□ -0.76
RFX3-201ENST00000302303 PRO3102Q9H379 93 aa10.3□□□□□ -0.76
RFX3-201ENST00000302303 ASB7Q9H672 318 aa10.3□□□□□ -0.76
RFX3-201ENST00000302303 RPF1Q9H9Y2 349 aaKnown RBP10.3□□□□□ -0.76
RFX3-201ENST00000302303 ARMCX3Q9UH62 379 aaPredicted RBP10.3□□□□□ -0.76
RFX3-201ENST00000302303 FRMD4BQ9Y2L6 1034 aa10.3□□□□□ -0.76
RFX3-201ENST00000302303 TRIP11Q15643 1979 aa10.29□□□□□ -0.76
RFX3-201ENST00000302303 CST3P01034 146 aaPredicted RBP10.29□□□□□ -0.76
RFX3-201ENST00000302303 LINC00271P0C7V0 271 aa10.29□□□□□ -0.76
RFX3-201ENST00000302303 EPB41P11171 864 aaKnown RBP10.29□□□□□ -0.76
RFX3-201ENST00000302303 SKIP12755 728 aa10.29□□□□□ -0.76
RFX3-201ENST00000302303 EEF1GP26641 437 aaKnown RBP10.29□□□□□ -0.76
RFX3-201ENST00000302303 CBWD6Q4V339 395 aa10.29□□□□□ -0.76
RFX3-201ENST00000302303 CBWD3Q5JTY5 395 aa10.29□□□□□ -0.76
RFX3-201ENST00000302303 GLRA4Q5JXX5 417 aa10.29□□□□□ -0.76
RFX3-201ENST00000302303 CBWD5Q5RIA9 395 aa10.29□□□□□ -0.76
RFX3-201ENST00000302303 LMBRD2Q68DH5 695 aaPredicted RBP10.29□□□□□ -0.76
RFX3-201ENST00000302303 INTS8Q75QN2 995 aaKnown RBP10.29□□□□□ -0.76
RFX3-201ENST00000302303 NPAS4Q8IUM7 802 aa10.29□□□□□ -0.76
RFX3-201ENST00000302303 C18orf25Q96B23 403 aaPredicted RBP10.29□□□□□ -0.76
RFX3-201ENST00000302303 CCDC127Q96BQ5 260 aa10.29□□□□□ -0.76
RFX3-201ENST00000302303 TUBGCP2Q9BSJ2 902 aa10.29□□□□□ -0.76
RFX3-201ENST00000302303 RSAD1Q9HA92 442 aa10.29□□□□□ -0.76
RFX3-201ENST00000302303 METTL14Q9HCE5 456 aaKnown RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms