RNA–Protein interactions for RNA: ENST00000302101.5

NHLH1-201, Transcript of nescient helix-loop-helix 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NHLH1, Length 2,563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLH1-201ENST00000302101 HOXC6P09630 235 aa23.83■■□□□ 1.41
NHLH1-201ENST00000302101 CLCN3P51790 818 aa23.83■■□□□ 1.41
NHLH1-201ENST00000302101 CETN1Q12798 172 aa23.83■■□□□ 1.41
NHLH1-201ENST00000302101 ZNF484Q5JVG2 852 aa23.83■■□□□ 1.41
NHLH1-201ENST00000302101 USP6NLQ92738 828 aa23.83■■□□□ 1.41
NHLH1-201ENST00000302101 MFSD14AQ96MC6 490 aa23.83■■□□□ 1.41
NHLH1-201ENST00000302101 POP1Q99575 1024 aaKnown RBP23.83■■□□□ 1.41
NHLH1-201ENST00000302101 TUT1Q9H6E5 874 aaKnown RBP23.83■■□□□ 1.41
NHLH1-201ENST00000302101 LUC7LQ9NQ29 371 aaKnown RBP23.83■■□□□ 1.41
NHLH1-201ENST00000302101 TMEM88BA6NKF7 163 aa23.83■■□□□ 1.4
NHLH1-201ENST00000302101 PIGRP01833 764 aa23.83■■□□□ 1.4
NHLH1-201ENST00000302101 KLRC1P26715 233 aa23.83■■□□□ 1.4
NHLH1-201ENST00000302101 ASIC2Q16515 512 aa23.83■■□□□ 1.4
NHLH1-201ENST00000302101 ZNF668Q96K58 619 aaPredicted RBP23.83■■□□□ 1.4
NHLH1-201ENST00000302101 STYXL1Q9Y6J8 313 aa23.83■■□□□ 1.4
NHLH1-201ENST00000302101 TNPO2O14787 897 aaKnown RBP23.82■■□□□ 1.4
NHLH1-201ENST00000302101 SHOX2O60902 331 aaPredicted RBP23.82■■□□□ 1.4
NHLH1-201ENST00000302101 EFNA5P52803 228 aa23.82■■□□□ 1.4
NHLH1-201ENST00000302101 LMO3Q8TAP4 145 aa23.82■■□□□ 1.4
NHLH1-201ENST00000302101 HAPLN2Q9GZV7 340 aa23.82■■□□□ 1.4
NHLH1-201ENST00000302101 TMEM117Q9H0C3 514 aa23.82■■□□□ 1.4
NHLH1-201ENST00000302101 ANKFY1Q9P2R3 1169 aa23.82■■□□□ 1.4
NHLH1-201ENST00000302101 AGO2Q9UKV8 859 aaKnown RBP23.82■■□□□ 1.4
NHLH1-201ENST00000302101 PACSIN2Q9UNF0 486 aaPredicted RBP23.82■■□□□ 1.4
NHLH1-201ENST00000302101 C22orf31O95567 290 aa23.82■■□□□ 1.4
NHLH1-201ENST00000302101 TM4SF4P48230 202 aa23.82■■□□□ 1.4
NHLH1-201ENST00000302101 CYP24A1Q07973 514 aa23.82■■□□□ 1.4
NHLH1-201ENST00000302101 KLHL30Q0D2K2 578 aa23.82■■□□□ 1.4
NHLH1-201ENST00000302101 ESYT3A0FGR9 886 aa23.81■■□□□ 1.4
NHLH1-201ENST00000302101 ZNF233A6NK53 670 aa23.81■■□□□ 1.4
NHLH1-201ENST00000302101 P4HA2O15460 535 aa23.81■■□□□ 1.4
NHLH1-201ENST00000302101 EXTL3O43909 919 aa23.81■■□□□ 1.4
NHLH1-201ENST00000302101 BRD2P25440 801 aaKnown RBP23.81■■□□□ 1.4
NHLH1-201ENST00000302101 MXI1P50539 228 aa23.81■■□□□ 1.4
NHLH1-201ENST00000302101 JAM2P57087 298 aa23.81■■□□□ 1.4
NHLH1-201ENST00000302101 MCCD1P59942 119 aaPredicted RBP23.81■■□□□ 1.4
NHLH1-201ENST00000302101 SLC18A3Q16572 532 aa23.81■■□□□ 1.4
NHLH1-201ENST00000302101 DGKDQ16760 1214 aa23.81■■□□□ 1.4
NHLH1-201ENST00000302101 SLFN12LQ6IEE8 588 aa23.81■■□□□ 1.4
NHLH1-201ENST00000302101 NLRP4Q96MN2 994 aa23.81■■□□□ 1.4
NHLH1-201ENST00000302101 APEX2Q9UBZ4 518 aa23.81■■□□□ 1.4
NHLH1-201ENST00000302101 ADAMTS1Q9UHI8 967 aa23.81■■□□□ 1.4
NHLH1-201ENST00000302101 DNAJC12Q9UKB3 198 aa23.81■■□□□ 1.4
NHLH1-201ENST00000302101 GJD2Q9UKL4 321 aa23.81■■□□□ 1.4
NHLH1-201ENST00000302101 KAT6AQ92794 2004 aa23.81■■□□□ 1.4
NHLH1-201ENST00000302101 A0A087X0T9 212 aa23.81■■□□□ 1.4
NHLH1-201ENST00000302101 ZSCAN5CA6NGD5 496 aaPredicted RBP23.81■■□□□ 1.4
NHLH1-201ENST00000302101 GOLGA8KD6RF30 607 aa23.81■■□□□ 1.4
NHLH1-201ENST00000302101 DYNC1LI2O43237 492 aaPredicted RBP23.81■■□□□ 1.4
NHLH1-201ENST00000302101 HSF2BPO75031 334 aa23.81■■□□□ 1.4
NHLH1-201ENST00000302101 LRRN2O75325 713 aa23.81■■□□□ 1.4
NHLH1-201ENST00000302101 FAM228BP0C875 321 aa23.81■■□□□ 1.4
NHLH1-201ENST00000302101 RGS2P41220 211 aa23.81■■□□□ 1.4
NHLH1-201ENST00000302101 ACOT2P49753 483 aa23.81■■□□□ 1.4
NHLH1-201ENST00000302101 PPFIA1Q13136 1202 aa23.81■■□□□ 1.4
NHLH1-201ENST00000302101 CDCA2Q69YH5 1023 aaPredicted RBP23.81■■□□□ 1.4
NHLH1-201ENST00000302101 IRF2BP2Q7Z5L9 587 aa23.81■■□□□ 1.4
NHLH1-201ENST00000302101 ZBTB8OSQ8IWT0 167 aa23.81■■□□□ 1.4
NHLH1-201ENST00000302101 SH3GL2Q99962 352 aa23.81■■□□□ 1.4
NHLH1-201ENST00000302101 PACSIN1Q9BY11 444 aa23.81■■□□□ 1.4
NHLH1-201ENST00000302101 TTLL13PA6NNM8 815 aa23.8■■□□□ 1.4
NHLH1-201ENST00000302101 OPA1O60313 960 aa23.8■■□□□ 1.4
NHLH1-201ENST00000302101 MSCO60682 206 aa23.8■■□□□ 1.4
NHLH1-201ENST00000302101 GLI1P08151 1106 aa23.8■■□□□ 1.4
NHLH1-201ENST00000302101 DLATP10515 647 aaKnown RBP23.8■■□□□ 1.4
NHLH1-201ENST00000302101 MAP2K1Q02750 393 aaPredicted RBP23.8■■□□□ 1.4
NHLH1-201ENST00000302101 NAB2Q15742 525 aa23.8■■□□□ 1.4
NHLH1-201ENST00000302101 KIAA0753Q2KHM9 967 aa23.8■■□□□ 1.4
NHLH1-201ENST00000302101 DNAJC21Q5F1R6 531 aaKnown RBP23.8■■□□□ 1.4
NHLH1-201ENST00000302101 PHLDB3Q6NSJ2 640 aa23.8■■□□□ 1.4
NHLH1-201ENST00000302101 CYP4F22Q6NT55 531 aa23.8■■□□□ 1.4
NHLH1-201ENST00000302101 TMC2Q8TDI7 906 aa23.8■■□□□ 1.4
NHLH1-201ENST00000302101 CCDC113Q9H0I3 377 aa23.8■■□□□ 1.4
NHLH1-201ENST00000302101 KIAA1586Q9HCI6 787 aa23.8■■□□□ 1.4
NHLH1-201ENST00000302101 ZNF865P0CJ78 1059 aaPredicted RBP23.8■■□□□ 1.4
NHLH1-201ENST00000302101 TNFRSF8P28908 595 aa23.8■■□□□ 1.4
NHLH1-201ENST00000302101 EPC2Q52LR7 807 aa23.8■■□□□ 1.4
NHLH1-201ENST00000302101 USP37Q86T82 979 aa23.8■■□□□ 1.4
NHLH1-201ENST00000302101 CAVIN3Q969G5 261 aa23.8■■□□□ 1.4
NHLH1-201ENST00000302101 MSTO1Q9BUK6 570 aa23.8■■□□□ 1.4
NHLH1-201ENST00000302101 CAPS2Q9BXY5 557 aa23.8■■□□□ 1.4
NHLH1-201ENST00000302101 HEXIM1O94992 359 aaKnown RBP23.79■■□□□ 1.4
NHLH1-201ENST00000302101 IRAK1P51617 712 aa23.79■■□□□ 1.4
NHLH1-201ENST00000302101 NLRP11P59045 1033 aaKnown RBP23.79■■□□□ 1.4
NHLH1-201ENST00000302101 RNASE9P60153 205 aaKnown RBP23.79■■□□□ 1.4
NHLH1-201ENST00000302101 GLE1Q53GS7 698 aaKnown RBP23.79■■□□□ 1.4
NHLH1-201ENST00000302101 RABEP2Q9H5N1 569 aa23.79■■□□□ 1.4
NHLH1-201ENST00000302101 TOPORSQ9NS56 1045 aaPredicted RBP23.79■■□□□ 1.4
NHLH1-201ENST00000302101 NFU1Q9UMS0 254 aa23.79■■□□□ 1.4
NHLH1-201ENST00000302101 CA12O43570 354 aa23.79■■□□□ 1.4
NHLH1-201ENST00000302101 HOXD8P13378 290 aaPredicted RBP23.79■■□□□ 1.4
NHLH1-201ENST00000302101 CTGFP29279 349 aa23.79■■□□□ 1.4
NHLH1-201ENST00000302101 CARSP49589 748 aaKnown RBP23.79■■□□□ 1.4
NHLH1-201ENST00000302101 GUCY2DQ02846 1103 aa23.79■■□□□ 1.4
NHLH1-201ENST00000302101 TFDP1Q14186 410 aa23.79■■□□□ 1.4
NHLH1-201ENST00000302101 MAPK6Q16659 721 aa23.79■■□□□ 1.4
NHLH1-201ENST00000302101 KRT39Q6A163 491 aa23.79■■□□□ 1.4
NHLH1-201ENST00000302101 IFT20Q8IY31 132 aa23.79■■□□□ 1.4
NHLH1-201ENST00000302101 SOCS4Q8WXH5 440 aa23.79■■□□□ 1.4
NHLH1-201ENST00000302101 IFT81Q8WYA0 676 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms