RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 COMTP21964 271 aa10.83□□□□□ -0.68
FOXN4-201ENST00000299162 GNPTABQ3T906 1256 aa10.83□□□□□ -0.68
FOXN4-201ENST00000299162 FAM182AQ5T1J6 154 aa10.83□□□□□ -0.68
FOXN4-201ENST00000299162 TMEM63BQ5T3F8 832 aa10.83□□□□□ -0.68
FOXN4-201ENST00000299162 KRT39Q6A163 491 aa10.83□□□□□ -0.68
FOXN4-201ENST00000299162 CCDC13Q8IYE1 715 aa10.83□□□□□ -0.68
FOXN4-201ENST00000299162 PARD3BQ8TEW8 1205 aa10.83□□□□□ -0.68
FOXN4-201ENST00000299162 KLRG1Q96E93 195 aa10.83□□□□□ -0.68
FOXN4-201ENST00000299162 NUP85Q9BW27 656 aa10.83□□□□□ -0.68
FOXN4-201ENST00000299162 MTFR1LQ9H019 292 aa10.83□□□□□ -0.68
FOXN4-201ENST00000299162 VIPAS39Q9H9C1 493 aa10.83□□□□□ -0.68
FOXN4-201ENST00000299162 EXOC7Q9UPT5 735 aa10.83□□□□□ -0.68
FOXN4-201ENST00000299162 TCRBV7S2A1N4TA0A589 114 aa10.82□□□□□ -0.68
FOXN4-201ENST00000299162 GTPBP10A4D1E9 387 aaKnown RBP10.82□□□□□ -0.68
FOXN4-201ENST00000299162 PLTPP55058 493 aa10.82□□□□□ -0.68
FOXN4-201ENST00000299162 IRX1P78414 480 aaPredicted RBP10.82□□□□□ -0.68
FOXN4-201ENST00000299162 GTF2BQ00403 316 aa10.82□□□□□ -0.68
FOXN4-201ENST00000299162 STRN3Q13033 797 aa10.82□□□□□ -0.68
FOXN4-201ENST00000299162 GJC2Q5T442 439 aaPredicted RBP10.82□□□□□ -0.68
FOXN4-201ENST00000299162 DCAF12L1Q5VU92 463 aa10.82□□□□□ -0.68
FOXN4-201ENST00000299162 SCARA5Q6ZMJ2 495 aa10.82□□□□□ -0.68
FOXN4-201ENST00000299162 MICALCLQ6ZW33 695 aa10.82□□□□□ -0.68
FOXN4-201ENST00000299162 TAX1BP1Q86VP1 789 aa10.82□□□□□ -0.68
FOXN4-201ENST00000299162 C18orf8Q96DM3 657 aa10.82□□□□□ -0.68
FOXN4-201ENST00000299162 KLHL11Q9NVR0 708 aa10.82□□□□□ -0.68
FOXN4-201ENST00000299162 RAB20Q9NX57 234 aa10.82□□□□□ -0.68
FOXN4-201ENST00000299162 GGT7Q9UJ14 662 aa10.82□□□□□ -0.68
FOXN4-201ENST00000299162 DBR1Q9UK59 544 aaKnown RBP10.82□□□□□ -0.68
FOXN4-201ENST00000299162 GINS2Q9Y248 185 aa10.82□□□□□ -0.68
FOXN4-201ENST00000299162 PLAAQ9Y263 795 aa10.82□□□□□ -0.68
FOXN4-201ENST00000299162 TTLL13PA6NNM8 815 aa10.82□□□□□ -0.68
FOXN4-201ENST00000299162 GOLGA8KD6RF30 607 aa10.82□□□□□ -0.68
FOXN4-201ENST00000299162 K7ERI5 159 aa10.82□□□□□ -0.68
FOXN4-201ENST00000299162 CHUKO15111 745 aa10.82□□□□□ -0.68
FOXN4-201ENST00000299162 ECEL1O95672 775 aa10.82□□□□□ -0.68
FOXN4-201ENST00000299162 EZRP15311 586 aaKnown RBP10.82□□□□□ -0.68
FOXN4-201ENST00000299162 NR1D1P20393 614 aa10.82□□□□□ -0.68
FOXN4-201ENST00000299162 HOXA7P31268 230 aaPredicted RBP10.82□□□□□ -0.68
FOXN4-201ENST00000299162 SFNP31947 248 aa10.82□□□□□ -0.68
FOXN4-201ENST00000299162 PIK3CAP42336 1068 aa10.82□□□□□ -0.68
FOXN4-201ENST00000299162 PDE6CP51160 858 aa10.82□□□□□ -0.68
FOXN4-201ENST00000299162 DHX9Q08211 1270 aaKnown RBP10.82□□□□□ -0.68
FOXN4-201ENST00000299162 ADCY2Q08462 1091 aa10.82□□□□□ -0.68
FOXN4-201ENST00000299162 EMC2Q15006 297 aa10.82□□□□□ -0.68
FOXN4-201ENST00000299162 AP1ARQ63HQ0 302 aa10.82□□□□□ -0.68
FOXN4-201ENST00000299162 FBXL13Q8NEE6 735 aa10.82□□□□□ -0.68
FOXN4-201ENST00000299162 EPS8L1Q8TE68 723 aa10.82□□□□□ -0.68
FOXN4-201ENST00000299162 ZNF473Q8WTR7 871 aaKnown RBP10.82□□□□□ -0.68
FOXN4-201ENST00000299162 CCT8L2Q96SF2 557 aa10.82□□□□□ -0.68
FOXN4-201ENST00000299162 HEMGNQ9BXL5 484 aa10.82□□□□□ -0.68
FOXN4-201ENST00000299162 ATP6V0A4Q9HBG4 840 aa10.82□□□□□ -0.68
FOXN4-201ENST00000299162 SLC40A1Q9NP59 571 aa10.82□□□□□ -0.68
FOXN4-201ENST00000299162 ZNF302Q9NR11 478 aa10.82□□□□□ -0.68
FOXN4-201ENST00000299162 FBXO40Q9UH90 709 aa10.82□□□□□ -0.68
FOXN4-201ENST00000299162 MCM8Q9UJA3 840 aa10.82□□□□□ -0.68
FOXN4-201ENST00000299162 UPP2O95045 317 aa10.82□□□□□ -0.68
FOXN4-201ENST00000299162 CLTAP09496 248 aa10.82□□□□□ -0.68
FOXN4-201ENST00000299162 CTNNA1P35221 906 aaKnown RBP10.82□□□□□ -0.68
FOXN4-201ENST00000299162 STXBP2Q15833 593 aa10.82□□□□□ -0.68
FOXN4-201ENST00000299162 C10orf76Q5T2E6 689 aa10.82□□□□□ -0.68
FOXN4-201ENST00000299162 SYCE1Q8N0S2 351 aa10.82□□□□□ -0.68
FOXN4-201ENST00000299162 ASAP3Q8TDY4 903 aa10.82□□□□□ -0.68
FOXN4-201ENST00000299162 TCP11Q8WWU5 503 aa10.82□□□□□ -0.68
FOXN4-201ENST00000299162 ANKRD62A6NC57 917 aa10.81□□□□□ -0.68
FOXN4-201ENST00000299162 CFHP08603 1231 aa10.81□□□□□ -0.68
FOXN4-201ENST00000299162 TMEM253P0C7T8 217 aa10.81□□□□□ -0.68
FOXN4-201ENST00000299162 GCKP35557 465 aa10.81□□□□□ -0.68
FOXN4-201ENST00000299162 MFAP3P55082 362 aa10.81□□□□□ -0.68
FOXN4-201ENST00000299162 EAPPQ56P03 285 aaPredicted RBP10.81□□□□□ -0.68
FOXN4-201ENST00000299162 TMEM270Q6UE05 265 aa10.81□□□□□ -0.68
FOXN4-201ENST00000299162 SLC7A3Q8WY07 619 aa10.81□□□□□ -0.68
FOXN4-201ENST00000299162 COPS5Q92905 334 aa10.81□□□□□ -0.68
FOXN4-201ENST00000299162 TRIM6Q9C030 488 aaPredicted RBP10.81□□□□□ -0.68
FOXN4-201ENST00000299162 BTBD7Q9P203 1132 aa10.81□□□□□ -0.68
FOXN4-201ENST00000299162 CD2APQ9Y5K6 639 aa10.81□□□□□ -0.68
FOXN4-201ENST00000299162 CSADQ9Y600 493 aa10.81□□□□□ -0.68
FOXN4-201ENST00000299162 CYP11B1P15538 503 aa10.81□□□□□ -0.68
FOXN4-201ENST00000299162 RPS12P25398 132 aaKnown RBP10.81□□□□□ -0.68
FOXN4-201ENST00000299162 MAP3K10Q02779 954 aa10.81□□□□□ -0.68
FOXN4-201ENST00000299162 ORC1Q13415 861 aa10.81□□□□□ -0.68
FOXN4-201ENST00000299162 MIS18BP1Q6P0N0 1132 aa10.81□□□□□ -0.68
FOXN4-201ENST00000299162 CATSPERGQ6ZRH7 1159 aa10.81□□□□□ -0.68
FOXN4-201ENST00000299162 CCDC50Q8IVM0 306 aa10.81□□□□□ -0.68
FOXN4-201ENST00000299162 SULF1Q8IWU6 871 aa10.81□□□□□ -0.68
FOXN4-201ENST00000299162 CCDC26Q8TAB7 109 aa10.81□□□□□ -0.68
FOXN4-201ENST00000299162 ZNF564Q8TBZ8 553 aaPredicted RBP10.81□□□□□ -0.68
FOXN4-201ENST00000299162 C1orf54Q8WWF1 131 aa10.81□□□□□ -0.68
FOXN4-201ENST00000299162 MAGOHBQ96A72 148 aaKnown RBP10.81□□□□□ -0.68
FOXN4-201ENST00000299162 PBKQ96KB5 322 aa10.81□□□□□ -0.68
FOXN4-201ENST00000299162 NLRP4Q96MN2 994 aa10.81□□□□□ -0.68
FOXN4-201ENST00000299162 MSTO1Q9BUK6 570 aa10.81□□□□□ -0.68
FOXN4-201ENST00000299162 C1orf112Q9NSG2 853 aa10.81□□□□□ -0.68
FOXN4-201ENST00000299162 GPRC5DQ9NZD1 345 aa10.81□□□□□ -0.68
FOXN4-201ENST00000299162 FBXL5Q9UKA1 691 aa10.81□□□□□ -0.68
FOXN4-201ENST00000299162 ZC3H4Q9UPT8 1303 aaKnown RBP10.81□□□□□ -0.68
FOXN4-201ENST00000299162 ZNF233A6NK53 670 aa10.8□□□□□ -0.68
FOXN4-201ENST00000299162 GGPS1O95749 300 aa10.8□□□□□ -0.68
FOXN4-201ENST00000299162 GPC5P78333 572 aa10.8□□□□□ -0.68
FOXN4-201ENST00000299162 IFFO1Q0D2I5 559 aa10.8□□□□□ -0.68
FOXN4-201ENST00000299162 SNCBQ16143 134 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms