RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 IGDCC4Q8TDY8 1250 aa17.42■□□□□ 0.38
SNAPC4-201ENST00000298532 RPF1Q9H9Y2 349 aaKnown RBP17.42■□□□□ 0.38
SNAPC4-201ENST00000298532 STX18Q9P2W9 335 aaKnown RBP17.42■□□□□ 0.38
SNAPC4-201ENST00000298532 SLC9A2Q9UBY0 812 aa17.42■□□□□ 0.38
SNAPC4-201ENST00000298532 FAM205CA6NFA0 338 aa17.42■□□□□ 0.38
SNAPC4-201ENST00000298532 CCNYL1Q8N7R7 359 aa17.42■□□□□ 0.38
SNAPC4-201ENST00000298532 MTBPQ96DY7 904 aa17.42■□□□□ 0.38
SNAPC4-201ENST00000298532 KLHL8Q9P2G9 620 aaPredicted RBP17.42■□□□□ 0.38
SNAPC4-201ENST00000298532 HERC5Q9UII4 1024 aaKnown RBP17.42■□□□□ 0.38
SNAPC4-201ENST00000298532 CTDNEP1O95476 244 aa17.42■□□□□ 0.38
SNAPC4-201ENST00000298532 ROR1Q01973 937 aa17.42■□□□□ 0.38
SNAPC4-201ENST00000298532 STK4Q13043 487 aa17.42■□□□□ 0.38
SNAPC4-201ENST00000298532 C4orf50Q6ZRC1 276 aa17.42■□□□□ 0.38
SNAPC4-201ENST00000298532 PSMC3IPQ9P2W1 217 aaPredicted RBP17.42■□□□□ 0.38
SNAPC4-201ENST00000298532 PPME1Q9Y570 386 aa17.42■□□□□ 0.38
SNAPC4-201ENST00000298532 UBE4BO95155 1302 aa17.42■□□□□ 0.38
SNAPC4-201ENST00000298532 EMSYQ7Z589 1322 aa17.42■□□□□ 0.38
SNAPC4-201ENST00000298532 VHLP40337 213 aa17.41■□□□□ 0.38
SNAPC4-201ENST00000298532 PAPOLAP51003 745 aaKnown RBP17.41■□□□□ 0.38
SNAPC4-201ENST00000298532 USP11P51784 963 aa17.41■□□□□ 0.38
SNAPC4-201ENST00000298532 MAPRE2Q15555 327 aa17.41■□□□□ 0.38
SNAPC4-201ENST00000298532 ARL13BQ3SXY8 428 aa17.41■□□□□ 0.38
SNAPC4-201ENST00000298532 FASTKD5Q7L8L6 764 aaKnown RBP17.41■□□□□ 0.38
SNAPC4-201ENST00000298532 RHPN2Q8IUC4 686 aa17.41■□□□□ 0.38
SNAPC4-201ENST00000298532 ERGIC2Q96RQ1 377 aa17.41■□□□□ 0.38
SNAPC4-201ENST00000298532 APOL6Q9BWW8 343 aa17.41■□□□□ 0.38
SNAPC4-201ENST00000298532 ZFXP17010 805 aaPredicted RBP17.41■□□□□ 0.38
SNAPC4-201ENST00000298532 ALDH18A1P54886 795 aaKnown RBP17.41■□□□□ 0.38
SNAPC4-201ENST00000298532 OSTNP61366 133 aa17.41■□□□□ 0.38
SNAPC4-201ENST00000298532 CYTH1Q15438 398 aa17.41■□□□□ 0.38
SNAPC4-201ENST00000298532 SRBD1Q8N5C6 995 aaKnown RBP17.41■□□□□ 0.38
SNAPC4-201ENST00000298532 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.41■□□□□ 0.387e-8■■■■□ 26.2
SNAPC4-201ENST00000298532 PRDM4Q9UKN5 801 aa17.41■□□□□ 0.38
SNAPC4-201ENST00000298532 AKT3Q9Y243 479 aa17.41■□□□□ 0.38
SNAPC4-201ENST00000298532 ACADSP16219 412 aa17.41■□□□□ 0.38
SNAPC4-201ENST00000298532 GNA15P30679 374 aa17.41■□□□□ 0.38
SNAPC4-201ENST00000298532 NEK2P51955 445 aa17.41■□□□□ 0.38
SNAPC4-201ENST00000298532 HPS3Q969F9 1004 aa17.41■□□□□ 0.38
SNAPC4-201ENST00000298532 ARL8AQ96BM9 186 aa17.41■□□□□ 0.38
SNAPC4-201ENST00000298532 C9orf72Q96LT7 481 aa17.41■□□□□ 0.38
SNAPC4-201ENST00000298532 MTO1Q9Y2Z2 717 aaKnown RBP17.41■□□□□ 0.38
SNAPC4-201ENST00000298532 PPP1R3GB7ZBB8 358 aa17.41■□□□□ 0.38
SNAPC4-201ENST00000298532 RABL6Q3YEC7 729 aaPredicted RBP17.41■□□□□ 0.38
SNAPC4-201ENST00000298532 PDXDC2PQ6P474 469 aa17.41■□□□□ 0.38
SNAPC4-201ENST00000298532 IL25Q9H293 177 aa17.41■□□□□ 0.38
SNAPC4-201ENST00000298532 TYK2P29597 1187 aa17.4■□□□□ 0.38
SNAPC4-201ENST00000298532 CYLC2Q14093 348 aaPredicted RBP17.4■□□□□ 0.38
SNAPC4-201ENST00000298532 ITIH4Q14624 930 aa17.4■□□□□ 0.38
SNAPC4-201ENST00000298532 RIBC1Q8N443 379 aaPredicted RBP17.4■□□□□ 0.38
SNAPC4-201ENST00000298532 SYN2Q92777 582 aaPredicted RBP17.4■□□□□ 0.38
SNAPC4-201ENST00000298532 KCNK16Q96T55 309 aa17.4■□□□□ 0.38
SNAPC4-201ENST00000298532 PDP2Q9P2J9 529 aa17.4■□□□□ 0.38
SNAPC4-201ENST00000298532 A0A0G2JLW4 131 aa17.4■□□□□ 0.38
SNAPC4-201ENST00000298532 AP5Z1O43299 807 aa17.4■□□□□ 0.38
SNAPC4-201ENST00000298532 PRLRP16471 622 aa17.4■□□□□ 0.38
SNAPC4-201ENST00000298532 SCP2P22307 547 aa17.4■□□□□ 0.38
SNAPC4-201ENST00000298532 PMLP29590 882 aa17.4■□□□□ 0.38
SNAPC4-201ENST00000298532 ARMCX2Q7L311 632 aa17.4■□□□□ 0.38
SNAPC4-201ENST00000298532 COL23A1Q86Y22 540 aaPredicted RBP17.4■□□□□ 0.38
SNAPC4-201ENST00000298532 CNPY4Q8N129 248 aa17.4■□□□□ 0.38
SNAPC4-201ENST00000298532 SUCLA2Q9P2R7 463 aaPredicted RBP17.4■□□□□ 0.38
SNAPC4-201ENST00000298532 SLC16A4O15374 487 aa17.4■□□□□ 0.38
SNAPC4-201ENST00000298532 KLRC1P26715 233 aa17.4■□□□□ 0.38
SNAPC4-201ENST00000298532 PRDX5P30044 214 aa17.4■□□□□ 0.38
SNAPC4-201ENST00000298532 C4orf33Q8N1A6 199 aa17.4■□□□□ 0.38
SNAPC4-201ENST00000298532 RPS6KC1Q96S38 1066 aa17.4■□□□□ 0.38
SNAPC4-201ENST00000298532 CCDC90BQ9GZT6 254 aa17.4■□□□□ 0.38
SNAPC4-201ENST00000298532 ZC4H2Q9NQZ6 224 aa17.4■□□□□ 0.38
SNAPC4-201ENST00000298532 PCSK1NQ9UHG2 260 aa17.4■□□□□ 0.38
SNAPC4-201ENST00000298532 H3BRJ5 948 aa17.4■□□□□ 0.38
SNAPC4-201ENST00000298532 SERPINB3P29508 390 aa17.4■□□□□ 0.38
SNAPC4-201ENST00000298532 SCTRP47872 440 aa17.4■□□□□ 0.38
SNAPC4-201ENST00000298532 BCAR1P56945 870 aa17.4■□□□□ 0.38
SNAPC4-201ENST00000298532 ERVK-24P63145 666 aa17.4■□□□□ 0.38
SNAPC4-201ENST00000298532 NCLNQ969V3 563 aa17.4■□□□□ 0.38
SNAPC4-201ENST00000298532 FAM213AQ9BRX8 229 aa17.4■□□□□ 0.38
SNAPC4-201ENST00000298532 ARHGAP26Q9UNA1 814 aa17.4■□□□□ 0.38
SNAPC4-201ENST00000298532 GOLGA8RI6L899 631 aa17.39■□□□□ 0.37
SNAPC4-201ENST00000298532 EIF2AK2P19525 551 aaKnown RBP17.39■□□□□ 0.37
SNAPC4-201ENST00000298532 CHRNA5P30532 468 aa17.39■□□□□ 0.37
SNAPC4-201ENST00000298532 SCARF1Q14162 830 aa17.39■□□□□ 0.37
SNAPC4-201ENST00000298532 SPOUT1Q5T280 376 aaKnown RBP17.39■□□□□ 0.37
SNAPC4-201ENST00000298532 PAPD7Q5XG87 772 aaKnown RBP17.39■□□□□ 0.37
SNAPC4-201ENST00000298532 LRRC34Q8IZ02 419 aa17.39■□□□□ 0.37
SNAPC4-201ENST00000298532 EXT2Q93063 718 aa17.39■□□□□ 0.37
SNAPC4-201ENST00000298532 PARVAQ9NVD7 372 aa17.39■□□□□ 0.37
SNAPC4-201ENST00000298532 INPP5FQ9Y2H2 1132 aa17.39■□□□□ 0.37
SNAPC4-201ENST00000298532 NQO1P15559 274 aaKnown RBP17.39■□□□□ 0.37
SNAPC4-201ENST00000298532 TAP1Q03518 808 aa17.39■□□□□ 0.37
SNAPC4-201ENST00000298532 SLC29A2Q14542 456 aa17.39■□□□□ 0.37
SNAPC4-201ENST00000298532 ANKMY2Q8IV38 441 aa17.39■□□□□ 0.37
SNAPC4-201ENST00000298532 TEKT4Q8WW24 435 aa17.39■□□□□ 0.37
SNAPC4-201ENST00000298532 FAM129AQ9BZQ8 928 aa17.39■□□□□ 0.37
SNAPC4-201ENST00000298532 APEX2Q9UBZ4 518 aa17.39■□□□□ 0.37
SNAPC4-201ENST00000298532 CLDN3O15551 220 aa17.39■□□□□ 0.37
SNAPC4-201ENST00000298532 KDM1AO60341 852 aa17.39■□□□□ 0.37
SNAPC4-201ENST00000298532 CTCFP49711 727 aaPredicted RBP17.39■□□□□ 0.37
SNAPC4-201ENST00000298532 ERFP50548 548 aa17.39■□□□□ 0.37
SNAPC4-201ENST00000298532 LRRC36Q1X8D7 754 aa17.39■□□□□ 0.37
SNAPC4-201ENST00000298532 P3H1Q32P28 736 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms