RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 TAGAPQ8N103 731 aa16.32■□□□□ 0.2
FNDC1-201ENST00000297267 LRRN4CLQ8ND94 238 aa16.32■□□□□ 0.2
FNDC1-201ENST00000297267 ZSWIM2Q8NEG5 633 aa16.32■□□□□ 0.2
FNDC1-201ENST00000297267 B4GALNT2Q8NHY0 566 aa16.32■□□□□ 0.2
FNDC1-201ENST00000297267 COG1Q8WTW3 980 aa16.32■□□□□ 0.2
FNDC1-201ENST00000297267 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.32■□□□□ 0.2
FNDC1-201ENST00000297267 IP6K2Q9UHH9 426 aa16.32■□□□□ 0.2
FNDC1-201ENST00000297267 ITM2BQ9Y287 266 aa16.32■□□□□ 0.2
FNDC1-201ENST00000297267 CSDE1O75534 798 aaKnown RBP16.32■□□□□ 0.2
FNDC1-201ENST00000297267 PAMP19021 973 aa16.32■□□□□ 0.2
FNDC1-201ENST00000297267 CARSP49589 748 aaKnown RBP16.32■□□□□ 0.2
FNDC1-201ENST00000297267 DDX53Q86TM3 631 aaKnown RBP16.32■□□□□ 0.2
FNDC1-201ENST00000297267 LINC00116Q8NCU8 138 aa16.32■□□□□ 0.2
FNDC1-201ENST00000297267 RBM41Q96IZ5 413 aaKnown RBP16.32■□□□□ 0.2
FNDC1-201ENST00000297267 SERPINI1Q99574 410 aa16.32■□□□□ 0.2
FNDC1-201ENST00000297267 NOA1Q8NC60 698 aaKnown RBP16.32■□□□□ 0.2
FNDC1-201ENST00000297267 ANKARQ7Z5J8 1434 aa16.32■□□□□ 0.2
FNDC1-201ENST00000297267 RNF103-CHMP3A0A140T963 221 aa16.32■□□□□ 0.2
FNDC1-201ENST00000297267 IFNEQ86WN2 208 aa16.32■□□□□ 0.2
FNDC1-201ENST00000297267 IGDCC4Q8TDY8 1250 aa16.32■□□□□ 0.2
FNDC1-201ENST00000297267 PACSIN1Q9BY11 444 aa16.32■□□□□ 0.2
FNDC1-201ENST00000297267 METTL5Q9NRN9 209 aaKnown RBP16.32■□□□□ 0.2
FNDC1-201ENST00000297267 ATP8B1O43520 1251 aa16.32■□□□□ 0.2
FNDC1-201ENST00000297267 RARBP10826 455 aa16.32■□□□□ 0.2
FNDC1-201ENST00000297267 WDR72Q3MJ13 1102 aa16.32■□□□□ 0.2
FNDC1-201ENST00000297267 CCHCR1Q8TD31 782 aa16.32■□□□□ 0.2
FNDC1-201ENST00000297267 HASPINQ8TF76 798 aa16.32■□□□□ 0.2
FNDC1-201ENST00000297267 CYGBQ8WWM9 190 aa16.32■□□□□ 0.2
FNDC1-201ENST00000297267 AGAP1Q9UPQ3 857 aa16.32■□□□□ 0.2
FNDC1-201ENST00000297267 SDC4P31431 198 aa16.31■□□□□ 0.2
FNDC1-201ENST00000297267 RNF219Q5W0B1 726 aaPredicted RBP16.31■□□□□ 0.2
FNDC1-201ENST00000297267 SLFN12LQ6IEE8 588 aa16.31■□□□□ 0.2
FNDC1-201ENST00000297267 HAUS6Q7Z4H7 955 aa16.31■□□□□ 0.2
FNDC1-201ENST00000297267 SLC17A8Q8NDX2 589 aa16.31■□□□□ 0.2
FNDC1-201ENST00000297267 TMEM39BQ9GZU3 492 aa16.31■□□□□ 0.2
FNDC1-201ENST00000297267 PRKAG2Q9UGJ0 569 aa16.31■□□□□ 0.2
FNDC1-201ENST00000297267 CDC42BPAQ5VT25 1732 aa16.31■□□□□ 0.2
FNDC1-201ENST00000297267 NCF1BA6NI72 391 aaPredicted RBP16.31■□□□□ 0.2
FNDC1-201ENST00000297267 NCF1CA8MVU1 366 aaPredicted RBP16.31■□□□□ 0.2
FNDC1-201ENST00000297267 CHEK2O96017 543 aa16.31■□□□□ 0.2
FNDC1-201ENST00000297267 NCF1P14598 390 aaPredicted RBP16.31■□□□□ 0.2
FNDC1-201ENST00000297267 ANTXR2P58335 489 aa16.31■□□□□ 0.2
FNDC1-201ENST00000297267 KIAA1755Q5JYT7 1200 aa16.31■□□□□ 0.2
FNDC1-201ENST00000297267 EMBQ6PCB8 327 aa16.31■□□□□ 0.2
FNDC1-201ENST00000297267 TMEM35BQ8NCS4 154 aa16.31■□□□□ 0.2
FNDC1-201ENST00000297267 CPB2Q96IY4 423 aa16.31■□□□□ 0.2
FNDC1-201ENST00000297267 MBD5Q9P267 1494 aa16.31■□□□□ 0.2
FNDC1-201ENST00000297267 PREX2Q70Z35 1606 aa16.31■□□□□ 0.2
FNDC1-201ENST00000297267 TYK2P29597 1187 aa16.31■□□□□ 0.2
FNDC1-201ENST00000297267 PWP1Q13610 501 aa16.31■□□□□ 0.2
FNDC1-201ENST00000297267 NFIXQ14938 502 aa16.31■□□□□ 0.2
FNDC1-201ENST00000297267 ATG4AQ8WYN0 398 aa16.31■□□□□ 0.2
FNDC1-201ENST00000297267 GPRC5CQ9NQ84 441 aa16.31■□□□□ 0.2
FNDC1-201ENST00000297267 KLC4Q9NSK0 619 aa16.31■□□□□ 0.2
FNDC1-201ENST00000297267 CFAP74Q9C0B2 1584 aa16.31■□□□□ 0.2
FNDC1-201ENST00000297267 ERCC6L2Q5T890 1561 aa16.31■□□□□ 0.2
FNDC1-201ENST00000297267 CD44P16070 742 aaKnown RBP16.31■□□□□ 0.2
FNDC1-201ENST00000297267 GALCP54803 685 aa16.31■□□□□ 0.2
FNDC1-201ENST00000297267 OLFML2BQ68BL8 750 aa16.31■□□□□ 0.2
FNDC1-201ENST00000297267 OR6J1Q8NGC5 347 aa16.31■□□□□ 0.2
FNDC1-201ENST00000297267 NSUN4Q96CB9 384 aaKnown RBP16.31■□□□□ 0.2
FNDC1-201ENST00000297267 GCNAQ96QF7 691 aa16.31■□□□□ 0.2
FNDC1-201ENST00000297267 AFF2P51816 1311 aa16.31■□□□□ 0.2
FNDC1-201ENST00000297267 MYO1GB0I1T2 1018 aa16.31■□□□□ 0.2
FNDC1-201ENST00000297267 SLC37A4O43826 429 aa16.31■□□□□ 0.2
FNDC1-201ENST00000297267 ENDOD1O94919 500 aa16.31■□□□□ 0.2
FNDC1-201ENST00000297267 EIF3BP55884 814 aaKnown RBP16.31■□□□□ 0.2
FNDC1-201ENST00000297267 LRRC23Q53EV4 343 aaPredicted RBP16.31■□□□□ 0.2
FNDC1-201ENST00000297267 PPP4R3CPQ6ZMV5 832 aa16.31■□□□□ 0.2
FNDC1-201ENST00000297267 WDR75Q8IWA0 830 aaKnown RBP16.31■□□□□ 0.2
FNDC1-201ENST00000297267 PBXIP1Q96AQ6 731 aa16.31■□□□□ 0.2
FNDC1-201ENST00000297267 SNX9Q9Y5X1 595 aa16.31■□□□□ 0.2
FNDC1-201ENST00000297267 FLT1P17948 1338 aa16.31■□□□□ 0.2
FNDC1-201ENST00000297267 AIM2O14862 343 aa16.3■□□□□ 0.2
FNDC1-201ENST00000297267 KRT37O76014 449 aa16.3■□□□□ 0.2
FNDC1-201ENST00000297267 P4HBP07237 508 aaKnown RBP16.3■□□□□ 0.2
FNDC1-201ENST00000297267 VCAM1P19320 739 aa16.3■□□□□ 0.2
FNDC1-201ENST00000297267 RERGLQ9H628 205 aa16.3■□□□□ 0.2
FNDC1-201ENST00000297267 PIM2Q9P1W9 311 aa16.3■□□□□ 0.2
FNDC1-201ENST00000297267 SLC13A4Q9UKG4 626 aa16.3■□□□□ 0.2
FNDC1-201ENST00000297267 PARNO95453 639 aaKnown RBP16.3■□□□□ 0.2
FNDC1-201ENST00000297267 TARSP26639 723 aaKnown RBP16.3■□□□□ 0.2
FNDC1-201ENST00000297267 THEMIS2Q5TEJ8 643 aa16.3■□□□□ 0.2
FNDC1-201ENST00000297267 BEST2Q8NFU1 509 aa16.3■□□□□ 0.2
FNDC1-201ENST00000297267 TTC8Q8TAM2 541 aa16.3■□□□□ 0.2
FNDC1-201ENST00000297267 ACAP3Q96P50 834 aa16.3■□□□□ 0.2
FNDC1-201ENST00000297267 PHKA2P46019 1235 aa16.3■□□□□ 0.2
FNDC1-201ENST00000297267 BCAR1P56945 870 aa16.3■□□□□ 0.2
FNDC1-201ENST00000297267 FLAD1Q8NFF5 587 aa16.3■□□□□ 0.2
FNDC1-201ENST00000297267 TRABDQ9H4I3 376 aa16.3■□□□□ 0.2
FNDC1-201ENST00000297267 YY1AP1Q9H869 796 aa16.3■□□□□ 0.2
FNDC1-201ENST00000297267 HPCAL4Q9UM19 191 aa16.3■□□□□ 0.2
FNDC1-201ENST00000297267 CALCAP01258 141 aa16.3■□□□□ 0.2
FNDC1-201ENST00000297267 GRAMD4Q6IC98 578 aa16.3■□□□□ 0.2
FNDC1-201ENST00000297267 ULK4Q96C45 1275 aa16.3■□□□□ 0.2
FNDC1-201ENST00000297267 BPIFA3Q9BQP9 254 aa16.3■□□□□ 0.2
FNDC1-201ENST00000297267 PHF20Q9BVI0 1012 aa16.3■□□□□ 0.2
FNDC1-201ENST00000297267 PPP3CCP48454 512 aa16.3■□□□□ 0.2
FNDC1-201ENST00000297267 FLOT2Q14254 428 aa16.3■□□□□ 0.2
FNDC1-201ENST00000297267 NBPF9Q3BBW0 867 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms