RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 ATF5Q9Y2D1 282 aaPredicted RBP13.33□□□□□ -0.28
SLC6A1-201ENST00000287766 USP20Q9Y2K6 914 aa13.33□□□□□ -0.28
SLC6A1-201ENST00000287766 TBX3O15119 743 aa13.32□□□□□ -0.28
SLC6A1-201ENST00000287766 SLC16A3O15427 465 aaKnown RBP13.32□□□□□ -0.28
SLC6A1-201ENST00000287766 SUPT3HO75486 399 aa13.32□□□□□ -0.28
SLC6A1-201ENST00000287766 CHN1P15882 459 aa13.32□□□□□ -0.28
SLC6A1-201ENST00000287766 CHRNA3P32297 505 aa13.32□□□□□ -0.28
SLC6A1-201ENST00000287766 CDR2Q01850 454 aa13.32□□□□□ -0.28
SLC6A1-201ENST00000287766 MEI1Q5TIA1 1274 aa13.32□□□□□ -0.28
SLC6A1-201ENST00000287766 TRMT10CQ7L0Y3 403 aaKnown RBP13.32□□□□□ -0.28
SLC6A1-201ENST00000287766 SGSM3Q96HU1 749 aa13.32□□□□□ -0.28
SLC6A1-201ENST00000287766 SCYL1Q96KG9 808 aa13.32□□□□□ -0.28
SLC6A1-201ENST00000287766 PCSK1NQ9UHG2 260 aa13.32□□□□□ -0.28
SLC6A1-201ENST00000287766 FEM1BQ9UK73 627 aa13.32□□□□□ -0.28
SLC6A1-201ENST00000287766 MAGED2Q9UNF1 606 aaPredicted RBP13.32□□□□□ -0.28
SLC6A1-201ENST00000287766 CCND2P30279 289 aa13.32□□□□□ -0.28
SLC6A1-201ENST00000287766 SLC8A3P57103 927 aa13.32□□□□□ -0.28
SLC6A1-201ENST00000287766 SNRNP35Q16560 246 aaKnown RBP13.32□□□□□ -0.28
SLC6A1-201ENST00000287766 HADHQ16836 314 aaKnown RBP13.32□□□□□ -0.28
SLC6A1-201ENST00000287766 ANKRD20A4Q4UJ75 823 aa13.32□□□□□ -0.28
SLC6A1-201ENST00000287766 ANKRD20A8PQ5CZ79 823 aa13.32□□□□□ -0.28
SLC6A1-201ENST00000287766 ANKRD20A2Q5SQ80 823 aa13.32□□□□□ -0.28
SLC6A1-201ENST00000287766 ANKRD20A1Q5TYW2 823 aa13.32□□□□□ -0.28
SLC6A1-201ENST00000287766 CDAN1Q8IWY9 1227 aa13.32□□□□□ -0.28
SLC6A1-201ENST00000287766 CERS5Q8N5B7 392 aa13.32□□□□□ -0.28
SLC6A1-201ENST00000287766 SYN2Q92777 582 aaPredicted RBP13.32□□□□□ -0.28
SLC6A1-201ENST00000287766 DNAJC19Q96DA6 116 aa13.32□□□□□ -0.28
SLC6A1-201ENST00000287766 ACP6Q9NPH0 428 aa13.32□□□□□ -0.28
SLC6A1-201ENST00000287766 ZFP69BQ9UJL9 534 aa13.32□□□□□ -0.28
SLC6A1-201ENST00000287766 PAIP2BQ9ULR5 123 aaKnown RBP13.32□□□□□ -0.28
SLC6A1-201ENST00000287766 LMNAP02545 664 aaKnown RBP13.32□□□□□ -0.28
SLC6A1-201ENST00000287766 PSAPP07602 524 aa13.32□□□□□ -0.28
SLC6A1-201ENST00000287766 SOX10P56693 466 aa13.32□□□□□ -0.28
SLC6A1-201ENST00000287766 ERVK-9P63128 1117 aa13.32□□□□□ -0.28
SLC6A1-201ENST00000287766 BAATQ14032 418 aaPredicted RBP13.32□□□□□ -0.28
SLC6A1-201ENST00000287766 SPARCL1Q14515 664 aa13.32□□□□□ -0.28
SLC6A1-201ENST00000287766 TMEM119Q4V9L6 283 aa13.32□□□□□ -0.28
SLC6A1-201ENST00000287766 TMEM154Q6P9G4 183 aa13.32□□□□□ -0.28
SLC6A1-201ENST00000287766 C16orf87Q6PH81 154 aa13.32□□□□□ -0.28
SLC6A1-201ENST00000287766 NUDCD3Q8IVD9 361 aa13.32□□□□□ -0.28
SLC6A1-201ENST00000287766 ATG4AQ8WYN0 398 aa13.32□□□□□ -0.28
SLC6A1-201ENST00000287766 TMEM143Q96AN5 459 aa13.32□□□□□ -0.28
SLC6A1-201ENST00000287766 TUBB6Q9BUF5 446 aa13.32□□□□□ -0.28
SLC6A1-201ENST00000287766 APOL6Q9BWW8 343 aa13.32□□□□□ -0.28
SLC6A1-201ENST00000287766 MRPL47Q9HD33 250 aaKnown RBP13.32□□□□□ -0.28
SLC6A1-201ENST00000287766 DCAF15Q66K64 600 aa13.32□□□□□ -0.28
SLC6A1-201ENST00000287766 SESTD1Q86VW0 696 aa13.32□□□□□ -0.28
SLC6A1-201ENST00000287766 CBWD2Q8IUF1 395 aa13.32□□□□□ -0.28
SLC6A1-201ENST00000287766 CCDC124Q96CT7 223 aaKnown RBP13.32□□□□□ -0.28
SLC6A1-201ENST00000287766 TRIM55Q9BYV6 548 aa13.32□□□□□ -0.28
SLC6A1-201ENST00000287766 AS3MTQ9HBK9 375 aa13.32□□□□□ -0.28
SLC6A1-201ENST00000287766 RHBDL2Q9NX52 303 aa13.32□□□□□ -0.28
SLC6A1-201ENST00000287766 EPS15L1Q9UBC2 864 aa13.32□□□□□ -0.28
SLC6A1-201ENST00000287766 TOPAZ1Q8N9V7 1692 aa13.31□□□□□ -0.28
SLC6A1-201ENST00000287766 PPP1R12AO14974 1030 aaPredicted RBP13.31□□□□□ -0.28
SLC6A1-201ENST00000287766 TLR3O15455 904 aaKnown RBP13.31□□□□□ -0.28
SLC6A1-201ENST00000287766 STK10O94804 968 aaKnown RBP13.31□□□□□ -0.28
SLC6A1-201ENST00000287766 SGPL1O95470 568 aa13.31□□□□□ -0.28
SLC6A1-201ENST00000287766 FGRP09769 529 aa13.31□□□□□ -0.28
SLC6A1-201ENST00000287766 PRLRP16471 622 aa13.31□□□□□ -0.28
SLC6A1-201ENST00000287766 PSMC5P62195 406 aa13.31□□□□□ -0.28
SLC6A1-201ENST00000287766 SEZ6Q53EL9 994 aa13.31□□□□□ -0.28
SLC6A1-201ENST00000287766 FBXO25Q8TCJ0 367 aa13.31□□□□□ -0.28
SLC6A1-201ENST00000287766 BAP1Q92560 729 aa13.31□□□□□ -0.28
SLC6A1-201ENST00000287766 TRIM56Q9BRZ2 755 aaKnown RBP13.31□□□□□ -0.28
SLC6A1-201ENST00000287766 NRBP2Q9NSY0 501 aa13.31□□□□□ -0.28
SLC6A1-201ENST00000287766 SALL4Q9UJQ4 1053 aa13.31□□□□□ -0.28
SLC6A1-201ENST00000287766 GSTA1P08263 222 aa13.31□□□□□ -0.28
SLC6A1-201ENST00000287766 GSTA2P09210 222 aa13.31□□□□□ -0.28
SLC6A1-201ENST00000287766 PTGISQ16647 500 aa13.31□□□□□ -0.28
SLC6A1-201ENST00000287766 KYNUQ16719 465 aa13.31□□□□□ -0.28
SLC6A1-201ENST00000287766 RABGAP1LQ5R372 815 aa13.31□□□□□ -0.28
SLC6A1-201ENST00000287766 MIS18BP1Q6P0N0 1132 aa13.31□□□□□ -0.28
SLC6A1-201ENST00000287766 PACS2Q86VP3 889 aa13.31□□□□□ -0.28
SLC6A1-201ENST00000287766 TGS1Q96RS0 853 aaKnown RBP13.31□□□□□ -0.28
SLC6A1-201ENST00000287766 ERP44Q9BS26 406 aa13.31□□□□□ -0.28
SLC6A1-201ENST00000287766 TMEM117Q9H0C3 514 aa13.31□□□□□ -0.28
SLC6A1-201ENST00000287766 TBC1D22BQ9NU19 505 aa13.31□□□□□ -0.28
SLC6A1-201ENST00000287766 SERPINB4P48594 390 aa13.31□□□□□ -0.28
SLC6A1-201ENST00000287766 DDR1Q08345 913 aa13.31□□□□□ -0.28
SLC6A1-201ENST00000287766 MTMR2Q13614 643 aa13.31□□□□□ -0.28
SLC6A1-201ENST00000287766 CIAPIN1Q6FI81 312 aa13.31□□□□□ -0.28
SLC6A1-201ENST00000287766 MCUQ8NE86 351 aa13.31□□□□□ -0.28
SLC6A1-201ENST00000287766 SLC35C1Q96A29 364 aa13.31□□□□□ -0.28
SLC6A1-201ENST00000287766 SEC16BQ96JE7 1060 aa13.31□□□□□ -0.28
SLC6A1-201ENST00000287766 WRNIP1Q96S55 665 aa13.31□□□□□ -0.28
SLC6A1-201ENST00000287766 TRAIPQ9BWF2 469 aa13.31□□□□□ -0.28
SLC6A1-201ENST00000287766 HERC5Q9UII4 1024 aaKnown RBP13.31□□□□□ -0.28
SLC6A1-201ENST00000287766 RTN2O75298 545 aa13.31□□□□□ -0.28
SLC6A1-201ENST00000287766 TMEM253P0C7T8 217 aa13.31□□□□□ -0.28
SLC6A1-201ENST00000287766 GRM1Q13255 1194 aa13.31□□□□□ -0.28
SLC6A1-201ENST00000287766 APOBEC3HQ6NTF7 200 aaKnown RBP13.31□□□□□ -0.28
SLC6A1-201ENST00000287766 AADACL2Q6P093 401 aa13.31□□□□□ -0.28
SLC6A1-201ENST00000287766 CYB5D1Q6P9G0 228 aa13.31□□□□□ -0.28
SLC6A1-201ENST00000287766 C7orf31Q8N865 590 aa13.31□□□□□ -0.28
SLC6A1-201ENST00000287766 AENQ8WTP8 325 aaKnown RBP13.31□□□□□ -0.28
SLC6A1-201ENST00000287766 HSPH1Q92598 858 aa13.31□□□□□ -0.28
SLC6A1-201ENST00000287766 VTI1AQ96AJ9 217 aa13.31□□□□□ -0.28
SLC6A1-201ENST00000287766 POLR3FQ9H1D9 316 aaPredicted RBP13.31□□□□□ -0.28
SLC6A1-201ENST00000287766 GINM1Q9NU53 330 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms