RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 ZNF287Q9HBT7 754 aa12.15□□□□□ -0.46
SCLT1-201ENST00000281142 GPBP1L1Q9HC44 474 aaPredicted RBP12.15□□□□□ -0.46
SCLT1-201ENST00000281142 RGL1Q9NZL6 768 aa12.15□□□□□ -0.46
SCLT1-201ENST00000281142 LINGO3P0C6S8 592 aa12.14□□□□□ -0.47
SCLT1-201ENST00000281142 CETPP11597 493 aa12.14□□□□□ -0.47
SCLT1-201ENST00000281142 RARGP13631 454 aa12.14□□□□□ -0.47
SCLT1-201ENST00000281142 HOXA7P31268 230 aaPredicted RBP12.14□□□□□ -0.47
SCLT1-201ENST00000281142 FMO5P49326 533 aa12.14□□□□□ -0.47
SCLT1-201ENST00000281142 DRG2P55039 364 aaKnown RBP12.14□□□□□ -0.47
SCLT1-201ENST00000281142 MAP3K10Q02779 954 aa12.14□□□□□ -0.47
SCLT1-201ENST00000281142 ZNF543Q08ER8 600 aa12.14□□□□□ -0.47
SCLT1-201ENST00000281142 TATDN1Q6P1N9 297 aa12.14□□□□□ -0.47
SCLT1-201ENST00000281142 PIGOQ8TEQ8 1089 aa12.14□□□□□ -0.47
SCLT1-201ENST00000281142 NAP1L3Q99457 506 aaPredicted RBP12.14□□□□□ -0.47
SCLT1-201ENST00000281142 STK33Q9BYT3 514 aa12.14□□□□□ -0.47
SCLT1-201ENST00000281142 HERC5Q9UII4 1024 aaKnown RBP12.14□□□□□ -0.47
SCLT1-201ENST00000281142 CTNNA2P26232 953 aa12.14□□□□□ -0.47
SCLT1-201ENST00000281142 CHRNA3P32297 505 aa12.14□□□□□ -0.47
SCLT1-201ENST00000281142 ASPRV1Q53RT3 343 aa12.14□□□□□ -0.47
SCLT1-201ENST00000281142 PHLDB3Q6NSJ2 640 aa12.14□□□□□ -0.47
SCLT1-201ENST00000281142 LDHDQ86WU2 507 aa12.14□□□□□ -0.47
SCLT1-201ENST00000281142 ECHDC2Q86YB7 292 aa12.14□□□□□ -0.47
SCLT1-201ENST00000281142 SYT2Q8N9I0 419 aaPredicted RBP12.14□□□□□ -0.47
SCLT1-201ENST00000281142 ART4Q93070 314 aa12.14□□□□□ -0.47
SCLT1-201ENST00000281142 ZSWIM1Q9BR11 485 aa12.14□□□□□ -0.47
SCLT1-201ENST00000281142 ANO3Q9BYT9 981 aa12.14□□□□□ -0.47
SCLT1-201ENST00000281142 PAPPA2Q9BXP8 1791 aa12.14□□□□□ -0.47
SCLT1-201ENST00000281142 OTOFQ9HC10 1997 aa12.14□□□□□ -0.47
SCLT1-201ENST00000281142 hCG_1984214I3L0E3 225 aa12.14□□□□□ -0.47
SCLT1-201ENST00000281142 TBC1D12O60347 775 aa12.14□□□□□ -0.47
SCLT1-201ENST00000281142 FTLP02792 175 aaPredicted RBP12.14□□□□□ -0.47
SCLT1-201ENST00000281142 DLATP10515 647 aaKnown RBP12.14□□□□□ -0.47
SCLT1-201ENST00000281142 ALAS1P13196 640 aa12.14□□□□□ -0.47
SCLT1-201ENST00000281142 ATP2A2P16615 1042 aaKnown RBP12.14□□□□□ -0.47
SCLT1-201ENST00000281142 CHRNB2P17787 502 aa12.14□□□□□ -0.47
SCLT1-201ENST00000281142 ANXA13P27216 316 aa12.14□□□□□ -0.47
SCLT1-201ENST00000281142 COILP38432 576 aaPredicted RBP12.14□□□□□ -0.47
SCLT1-201ENST00000281142 NOVP48745 357 aa12.14□□□□□ -0.47
SCLT1-201ENST00000281142 ZNF131P52739 623 aa12.14□□□□□ -0.47
SCLT1-201ENST00000281142 JAG1P78504 1218 aa12.14□□□□□ -0.47
SCLT1-201ENST00000281142 TRAF1Q13077 416 aa12.14□□□□□ -0.47
SCLT1-201ENST00000281142 TAF11Q15544 211 aa12.14□□□□□ -0.47
SCLT1-201ENST00000281142 ZC3H12AQ5D1E8 599 aaKnown RBP12.14□□□□□ -0.47
SCLT1-201ENST00000281142 TAOK1Q7L7X3 1001 aa12.14□□□□□ -0.47
SCLT1-201ENST00000281142 ZNF713Q8N859 430 aaPredicted RBP12.14□□□□□ -0.47
SCLT1-201ENST00000281142 CYP2W1Q8TAV3 490 aa12.14□□□□□ -0.47
SCLT1-201ENST00000281142 C1orf54Q8WWF1 131 aa12.14□□□□□ -0.47
SCLT1-201ENST00000281142 TGS1Q96RS0 853 aaKnown RBP12.14□□□□□ -0.47
SCLT1-201ENST00000281142 TMEM109Q9BVC6 243 aa12.14□□□□□ -0.47
SCLT1-201ENST00000281142 INTS2Q9H0H0 1204 aaKnown RBP12.14□□□□□ -0.47
SCLT1-201ENST00000281142 ETNK1Q9HBU6 452 aa12.14□□□□□ -0.47
SCLT1-201ENST00000281142 PCYOX1Q9UHG3 505 aa12.14□□□□□ -0.47
SCLT1-201ENST00000281142 DNM3Q9UQ16 869 aa12.14□□□□□ -0.47
SCLT1-201ENST00000281142 ARL2BPQ9Y2Y0 163 aa12.14□□□□□ -0.47
SCLT1-201ENST00000281142 GJB6O95452 261 aa12.13□□□□□ -0.47
SCLT1-201ENST00000281142 SNHG28P0DPA3 235 aa12.13□□□□□ -0.47
SCLT1-201ENST00000281142 PEX5P50542 639 aa12.13□□□□□ -0.47
SCLT1-201ENST00000281142 TUBP50607 506 aa12.13□□□□□ -0.47
SCLT1-201ENST00000281142 KYNUQ16719 465 aa12.13□□□□□ -0.47
SCLT1-201ENST00000281142 BTNL9Q6UXG8 535 aa12.13□□□□□ -0.47
SCLT1-201ENST00000281142 SPOCK2Q92563 424 aa12.13□□□□□ -0.47
SCLT1-201ENST00000281142 CDCA5Q96FF9 252 aa12.13□□□□□ -0.47
SCLT1-201ENST00000281142 METTL14Q9HCE5 456 aaKnown RBP12.13□□□□□ -0.47
SCLT1-201ENST00000281142 PRKAG3Q9UGI9 489 aa12.13□□□□□ -0.47
SCLT1-201ENST00000281142 ANKRD62A6NC57 917 aa12.13□□□□□ -0.47
SCLT1-201ENST00000281142 GDF11O95390 407 aa12.13□□□□□ -0.47
SCLT1-201ENST00000281142 BRAFP15056 766 aa12.13□□□□□ -0.47
SCLT1-201ENST00000281142 FOXN2P32314 431 aa12.13□□□□□ -0.47
SCLT1-201ENST00000281142 VPS41P49754 854 aa12.13□□□□□ -0.47
SCLT1-201ENST00000281142 SIX1Q15475 284 aaPredicted RBP12.13□□□□□ -0.47
SCLT1-201ENST00000281142 ARMC3Q5W041 872 aa12.13□□□□□ -0.47
SCLT1-201ENST00000281142 MFSD5Q6N075 450 aa12.13□□□□□ -0.47
SCLT1-201ENST00000281142 NSMFQ6X4W1 530 aa12.13□□□□□ -0.47
SCLT1-201ENST00000281142 CKAP2Q8WWK9 683 aa12.13□□□□□ -0.47
SCLT1-201ENST00000281142 KAT5Q92993 513 aa12.13□□□□□ -0.47
SCLT1-201ENST00000281142 DIS3Q9Y2L1 958 aaKnown RBP12.13□□□□□ -0.47
SCLT1-201ENST00000281142 ATP8B3O60423 1300 aa12.13□□□□□ -0.47
SCLT1-201ENST00000281142 FRMPD4Q14CM0 1322 aa12.13□□□□□ -0.47
SCLT1-201ENST00000281142 SYNGAP1Q96PV0 1343 aa12.13□□□□□ -0.47
SCLT1-201ENST00000281142 EML1O00423 815 aa12.12□□□□□ -0.47
SCLT1-201ENST00000281142 GM2AP17900 193 aa12.12□□□□□ -0.47
SCLT1-201ENST00000281142 RPL13P26373 211 aaKnown RBP12.12□□□□□ -0.47
SCLT1-201ENST00000281142 BLMHQ13867 455 aa12.12□□□□□ -0.47
SCLT1-201ENST00000281142 PRKG1Q13976 671 aa12.12□□□□□ -0.47
SCLT1-201ENST00000281142 CERKLQ49MI3 558 aaPredicted RBP12.12□□□□□ -0.47
SCLT1-201ENST00000281142 ETNPPLQ8TBG4 499 aa12.12□□□□□ -0.47
SCLT1-201ENST00000281142 ATG4AQ8WYN0 398 aa12.12□□□□□ -0.47
SCLT1-201ENST00000281142 RXFP1Q9HBX9 757 aa12.12□□□□□ -0.47
SCLT1-201ENST00000281142 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.12□□□□□ -0.47
SCLT1-201ENST00000281142 FAM86B1E9PN63 330 aa12.12□□□□□ -0.47
SCLT1-201ENST00000281142 ZBTB5O15062 677 aa12.12□□□□□ -0.47
SCLT1-201ENST00000281142 SLC16A3O15427 465 aaKnown RBP12.12□□□□□ -0.47
SCLT1-201ENST00000281142 FESP07332 822 aa12.12□□□□□ -0.47
SCLT1-201ENST00000281142 FAM86B2P0C5J1 330 aa12.12□□□□□ -0.47
SCLT1-201ENST00000281142 LACTBP83111 547 aaPredicted RBP12.12□□□□□ -0.47
SCLT1-201ENST00000281142 PPP2R5EQ16537 467 aa12.12□□□□□ -0.47
SCLT1-201ENST00000281142 SLC5A9Q2M3M2 681 aa12.12□□□□□ -0.47
SCLT1-201ENST00000281142 ZNF568Q3ZCX4 644 aa12.12□□□□□ -0.47
SCLT1-201ENST00000281142 ARHGEF19Q8IW93 802 aa12.12□□□□□ -0.47
SCLT1-201ENST00000281142 ELMO3Q96BJ8 720 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms