RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 ARL8BQ9NVJ2 186 aa13.66□□□□□ -0.22
HERC6-202ENST00000273960 AMPD1P23109 780 aa13.66□□□□□ -0.22
HERC6-202ENST00000273960 CHRNA3P32297 505 aa13.66□□□□□ -0.22
HERC6-202ENST00000273960 LBRQ14739 615 aaKnown RBP13.66□□□□□ -0.22
HERC6-202ENST00000273960 COG2Q14746 738 aa13.66□□□□□ -0.22
HERC6-202ENST00000273960 DBN1Q16643 649 aa13.66□□□□□ -0.22
HERC6-202ENST00000273960 C10orf76Q5T2E6 689 aa13.66□□□□□ -0.22
HERC6-202ENST00000273960 KRT27Q7Z3Y8 459 aa13.66□□□□□ -0.22
HERC6-202ENST00000273960 SLFN11Q7Z7L1 901 aa13.66□□□□□ -0.22
HERC6-202ENST00000273960 RBM17Q96I25 401 aaKnown RBP13.66□□□□□ -0.22
HERC6-202ENST00000273960 FAM210AQ96ND0 272 aa13.66□□□□□ -0.22
HERC6-202ENST00000273960 CCDC134Q9H6E4 229 aa13.66□□□□□ -0.22
HERC6-202ENST00000273960 VPS37BQ9H9H4 285 aa13.66□□□□□ -0.22
HERC6-202ENST00000273960 CD209Q9NNX6 404 aa13.66□□□□□ -0.22
HERC6-202ENST00000273960 DDX25Q9UHL0 483 aaKnown RBP13.66□□□□□ -0.22
HERC6-202ENST00000273960 ANAPC5Q9UJX4 755 aa13.66□□□□□ -0.22
HERC6-202ENST00000273960 MTUS1Q9ULD2 1270 aa13.66□□□□□ -0.22
HERC6-202ENST00000273960 BZW2Q9Y6E2 419 aaKnown RBP13.66□□□□□ -0.22
HERC6-202ENST00000273960 ADAMTS7Q9UKP4 1686 aa13.66□□□□□ -0.22
HERC6-202ENST00000273960 USP17L5A8MUK1 530 aa13.66□□□□□ -0.22
HERC6-202ENST00000273960 RPA3P35244 121 aaPredicted RBP13.66□□□□□ -0.22
HERC6-202ENST00000273960 BTKQ06187 659 aa13.66□□□□□ -0.22
HERC6-202ENST00000273960 GALNT17Q6IS24 598 aa13.66□□□□□ -0.22
HERC6-202ENST00000273960 GSTA5Q7RTV2 222 aa13.66□□□□□ -0.22
HERC6-202ENST00000273960 TTC7BQ86TV6 843 aa13.66□□□□□ -0.22
HERC6-202ENST00000273960 RIBC1Q8N443 379 aaPredicted RBP13.66□□□□□ -0.22
HERC6-202ENST00000273960 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.66□□□□□ -0.22
HERC6-202ENST00000273960 CNTNAP4Q9C0A0 1308 aa13.65□□□□□ -0.22
HERC6-202ENST00000273960 EXOC1LA0A1B0GW35 172 aa13.65□□□□□ -0.22
HERC6-202ENST00000273960 PGM3O95394 542 aa13.65□□□□□ -0.22
HERC6-202ENST00000273960 INHBCP55103 352 aa13.65□□□□□ -0.22
HERC6-202ENST00000273960 PKN2Q16513 984 aaKnown RBP13.65□□□□□ -0.22
HERC6-202ENST00000273960 RNF43Q68DV7 783 aa13.65□□□□□ -0.22
HERC6-202ENST00000273960 C4orf50Q6ZRC1 276 aa13.65□□□□□ -0.22
HERC6-202ENST00000273960 RFWD2Q8NHY2 731 aa13.65□□□□□ -0.22
HERC6-202ENST00000273960 RUNDC3BQ96NL0 473 aa13.65□□□□□ -0.22
HERC6-202ENST00000273960 EYA3Q99504 573 aa13.65□□□□□ -0.22
HERC6-202ENST00000273960 BRIP1Q9BX63 1249 aa13.65□□□□□ -0.22
HERC6-202ENST00000273960 AAASQ9NRG9 546 aa13.65□□□□□ -0.22
HERC6-202ENST00000273960 CNOT7Q9UIV1 285 aaKnown RBP13.65□□□□□ -0.22
HERC6-202ENST00000273960 FAM200BP0CF97 657 aa13.65□□□□□ -0.22
HERC6-202ENST00000273960 SLC30A5Q8TAD4 765 aa13.65□□□□□ -0.22
HERC6-202ENST00000273960 HIC2Q96JB3 615 aa13.65□□□□□ -0.22
HERC6-202ENST00000273960 CEP63Q96MT8 703 aa13.65□□□□□ -0.22
HERC6-202ENST00000273960 HEY2Q9UBP5 337 aa13.65□□□□□ -0.22
HERC6-202ENST00000273960 GRID1Q9ULK0 1009 aa13.65□□□□□ -0.22
HERC6-202ENST00000273960 TAF1P21675 1872 aa13.65□□□□□ -0.22
HERC6-202ENST00000273960 FAM47DPA6NHR8 397 aa13.65□□□□□ -0.23
HERC6-202ENST00000273960 FOXN3O00409 490 aaPredicted RBP13.65□□□□□ -0.23
HERC6-202ENST00000273960 PODXLO00592 558 aa13.65□□□□□ -0.23
HERC6-202ENST00000273960 BANF1O75531 89 aa13.65□□□□□ -0.23
HERC6-202ENST00000273960 SERPINB3P29508 390 aa13.65□□□□□ -0.23
HERC6-202ENST00000273960 SSTR3P32745 418 aaPredicted RBP13.65□□□□□ -0.23
HERC6-202ENST00000273960 GRM4Q14833 912 aa13.65□□□□□ -0.23
HERC6-202ENST00000273960 ZNF365Q70YC5 407 aa13.65□□□□□ -0.23
HERC6-202ENST00000273960 ATP8A2Q9NTI2 1148 aa13.65□□□□□ -0.23
HERC6-202ENST00000273960 NINJ2Q9NZG7 142 aa13.65□□□□□ -0.23
HERC6-202ENST00000273960 PARP2Q9UGN5 583 aa13.65□□□□□ -0.23
HERC6-202ENST00000273960 LAMB4A4D0S4 1761 aa13.64□□□□□ -0.23
HERC6-202ENST00000273960 A0A1W2PPM1 405 aa13.64□□□□□ -0.23
HERC6-202ENST00000273960 NR3C1P04150 777 aa13.64□□□□□ -0.23
HERC6-202ENST00000273960 FUT4P22083 530 aa13.64□□□□□ -0.23
HERC6-202ENST00000273960 ATP5DP30049 168 aa13.64□□□□□ -0.23
HERC6-202ENST00000273960 CCNG1P51959 295 aa13.64□□□□□ -0.23
HERC6-202ENST00000273960 DYNC1I2Q13409 638 aaKnown RBP13.64□□□□□ -0.23
HERC6-202ENST00000273960 MYBPC3Q14896 1274 aa13.64□□□□□ -0.23
HERC6-202ENST00000273960 SLC1A5Q15758 541 aa13.64□□□□□ -0.23
HERC6-202ENST00000273960 KCTD10Q9H3F6 313 aa13.64□□□□□ -0.23
HERC6-202ENST00000273960 LRP6O75581 1613 aa13.64□□□□□ -0.23
HERC6-202ENST00000273960 SPEF2Q9C093 1822 aa13.64□□□□□ -0.23
HERC6-202ENST00000273960 MAGEA13PA6NCF6 341 aa13.64□□□□□ -0.23
HERC6-202ENST00000273960 TTC4O95801 387 aa13.64□□□□□ -0.23
HERC6-202ENST00000273960 SOX5P35711 763 aa13.64□□□□□ -0.23
HERC6-202ENST00000273960 GSTO1P78417 241 aa13.64□□□□□ -0.23
HERC6-202ENST00000273960 KDSRQ06136 332 aa13.64□□□□□ -0.23
HERC6-202ENST00000273960 ZRSR2Q15696 482 aaKnown RBP13.64□□□□□ -0.23
HERC6-202ENST00000273960 EPC2Q52LR7 807 aa13.64□□□□□ -0.23
HERC6-202ENST00000273960 DPP8Q6V1X1 898 aaPredicted RBP13.64□□□□□ -0.23
HERC6-202ENST00000273960 DGKHQ86XP1 1220 aa13.64□□□□□ -0.23
HERC6-202ENST00000273960 CEP70Q8NHQ1 597 aa13.64□□□□□ -0.23
HERC6-202ENST00000273960 SLC5A5Q92911 643 aa13.64□□□□□ -0.23
HERC6-202ENST00000273960 FAM136AQ96C01 138 aa13.64□□□□□ -0.23
HERC6-202ENST00000273960 DDX27Q96GQ7 796 aaKnown RBP13.64□□□□□ -0.23
HERC6-202ENST00000273960 TRABDQ9H4I3 376 aa13.64□□□□□ -0.23
HERC6-202ENST00000273960 SH3GLB2Q9NR46 395 aa13.64□□□□□ -0.23
HERC6-202ENST00000273960 KLHL11Q9NVR0 708 aa13.64□□□□□ -0.23
HERC6-202ENST00000273960 MYO3BQ8WXR4 1341 aa13.64□□□□□ -0.23
HERC6-202ENST00000273960 USP17L15C9J2P7 530 aa13.63□□□□□ -0.23
HERC6-202ENST00000273960 USP17L13C9JLJ4 530 aa13.63□□□□□ -0.23
HERC6-202ENST00000273960 USP17L11C9JVI0 530 aa13.63□□□□□ -0.23
HERC6-202ENST00000273960 USP17L18D6R9N7 530 aa13.63□□□□□ -0.23
HERC6-202ENST00000273960 USP17L22D6RA61 530 aa13.63□□□□□ -0.23
HERC6-202ENST00000273960 USP17L17D6RBQ6 530 aa13.63□□□□□ -0.23
HERC6-202ENST00000273960 USP17L19D6RCP7 530 aa13.63□□□□□ -0.23
HERC6-202ENST00000273960 USP17L20D6RJB6 530 aa13.63□□□□□ -0.23
HERC6-202ENST00000273960 TTLL1O95922 423 aa13.63□□□□□ -0.23
HERC6-202ENST00000273960 LYNP07948 512 aa13.63□□□□□ -0.23
HERC6-202ENST00000273960 USP17L24Q0WX57 530 aa13.63□□□□□ -0.23
HERC6-202ENST00000273960 EPHA7Q15375 998 aa13.63□□□□□ -0.23
HERC6-202ENST00000273960 ZYXQ15942 572 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms