RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 RHBDF2Q6PJF5 856 aa29.38■■■□□ 2.29
CBX4-201ENST00000269397 IPO5O00410 1097 aaKnown RBP29.38■■■□□ 2.29
CBX4-201ENST00000269397 CRYMQ14894 314 aa29.38■■■□□ 2.29
CBX4-201ENST00000269397 FAM47EQ6ZV65 393 aa29.38■■■□□ 2.29
CBX4-201ENST00000269397 MORC4Q8TE76 937 aa29.38■■■□□ 2.29
CBX4-201ENST00000269397 FAM84AQ96KN4 292 aa29.38■■■□□ 2.29
CBX4-201ENST00000269397 HEMGNQ9BXL5 484 aa29.38■■■□□ 2.29
CBX4-201ENST00000269397 R3HDM2Q9Y2K5 976 aaKnown RBP29.38■■■□□ 2.29
CBX4-201ENST00000269397 IVDP26440 423 aa29.37■■■□□ 2.29
CBX4-201ENST00000269397 STAT2P52630 851 aa29.37■■■□□ 2.29
CBX4-201ENST00000269397 EP400NLQ6ZTU2 488 aa29.37■■■□□ 2.29
CBX4-201ENST00000269397 ERICH1Q86X53 443 aa29.37■■■□□ 2.29
CBX4-201ENST00000269397 ANAPC7Q9UJX3 599 aa29.37■■■□□ 2.29
CBX4-201ENST00000269397 GTF3C4Q9UKN8 822 aa29.37■■■□□ 2.29
CBX4-201ENST00000269397 FSCN2O14926 492 aa29.37■■■□□ 2.29
CBX4-201ENST00000269397 ADCY8P40145 1251 aa29.37■■■□□ 2.29
CBX4-201ENST00000269397 CBWD2Q8IUF1 395 aa29.37■■■□□ 2.29
CBX4-201ENST00000269397 SAAL1Q96ER3 474 aa29.37■■■□□ 2.29
CBX4-201ENST00000269397 SNF8Q96H20 258 aa29.37■■■□□ 2.29
CBX4-201ENST00000269397 PAIP2Q9BPZ3 127 aaKnown RBP29.37■■■□□ 2.29
CBX4-201ENST00000269397 LARSQ9P2J5 1176 aaKnown RBP29.37■■■□□ 2.29
CBX4-201ENST00000269397 C9orf72Q96LT7 481 aa29.36■■■□□ 2.29
CBX4-201ENST00000269397 TEKT3Q9BXF9 490 aa29.36■■■□□ 2.29
CBX4-201ENST00000269397 TOPORSQ9NS56 1045 aaPredicted RBP29.36■■■□□ 2.29
CBX4-201ENST00000269397 NINJ2Q9NZG7 142 aa29.36■■■□□ 2.29
CBX4-201ENST00000269397 KCND2Q9NZV8 630 aa29.36■■■□□ 2.29
CBX4-201ENST00000269397 GJB6O95452 261 aa29.36■■■□□ 2.29
CBX4-201ENST00000269397 VPS72Q15906 364 aa29.36■■■□□ 2.29
CBX4-201ENST00000269397 GPRC5CQ9NQ84 441 aa29.36■■■□□ 2.29
CBX4-201ENST00000269397 ITIH2P19823 946 aa29.35■■■□□ 2.29
CBX4-201ENST00000269397 RBM26Q5T8P6 1007 aaKnown RBP29.35■■■□□ 2.29
CBX4-201ENST00000269397 ACER1Q8TDN7 264 aa29.35■■■□□ 2.29
CBX4-201ENST00000269397 ACCSQ96QU6 501 aa29.35■■■□□ 2.29
CBX4-201ENST00000269397 NOP53Q9NZM5 478 aaKnown RBP29.35■■■□□ 2.29
CBX4-201ENST00000269397 ANAPC5Q9UJX4 755 aa29.35■■■□□ 2.29
CBX4-201ENST00000269397 LTBP1Q14766 1721 aa29.35■■■□□ 2.29
CBX4-201ENST00000269397 ALADP13716 330 aa29.35■■■□□ 2.29
CBX4-201ENST00000269397 MSH2P43246 934 aa29.35■■■□□ 2.29
CBX4-201ENST00000269397 ZNF570Q96NI8 536 aa29.35■■■□□ 2.29
CBX4-201ENST00000269397 WDR11Q9BZH6 1224 aa29.35■■■□□ 2.29
CBX4-201ENST00000269397 NAALADL1Q9UQQ1 740 aa29.35■■■□□ 2.29
CBX4-201ENST00000269397 SLC16A4O15374 487 aa29.34■■■□□ 2.29
CBX4-201ENST00000269397 ZYXQ15942 572 aaKnown RBP29.34■■■□□ 2.29
CBX4-201ENST00000269397 ANKLE1Q8NAG6 615 aa29.34■■■□□ 2.29
CBX4-201ENST00000269397 SHC3Q92529 594 aa29.34■■■□□ 2.29
CBX4-201ENST00000269397 TMEM206Q9H813 350 aa29.34■■■□□ 2.29
CBX4-201ENST00000269397 RXFP1Q9HBX9 757 aa29.34■■■□□ 2.29
CBX4-201ENST00000269397 ARHGEF3Q9NR81 526 aa29.34■■■□□ 2.29
CBX4-201ENST00000269397 POLRMTO00411 1230 aaKnown RBP29.34■■■□□ 2.29
CBX4-201ENST00000269397 ATP5DP30049 168 aa29.34■■■□□ 2.29
CBX4-201ENST00000269397 MAPK4P31152 587 aa29.34■■■□□ 2.29
CBX4-201ENST00000269397 TDRD3Q9H7E2 651 aaKnown RBP29.34■■■□□ 2.29
CBX4-201ENST00000269397 PRKAG3Q9UGI9 489 aa29.34■■■□□ 2.29
CBX4-201ENST00000269397 O00370 1275 aa29.33■■■□□ 2.29
CBX4-201ENST00000269397 NEBLO76041 1014 aa29.33■■■□□ 2.29
CBX4-201ENST00000269397 ATF2P15336 505 aa29.33■■■□□ 2.29
CBX4-201ENST00000269397 MFAP3P55082 362 aa29.33■■■□□ 2.29
CBX4-201ENST00000269397 HAUS6Q7Z4H7 955 aa29.33■■■□□ 2.29
CBX4-201ENST00000269397 CCHCR1Q8TD31 782 aa29.33■■■□□ 2.29
CBX4-201ENST00000269397 UVRAGQ9P2Y5 699 aa29.33■■■□□ 2.29
CBX4-201ENST00000269397 QSER1Q2KHR3 1735 aa29.33■■■□□ 2.29
CBX4-201ENST00000269397 P4HA2O15460 535 aa29.33■■■□□ 2.29
CBX4-201ENST00000269397 FOXN2P32314 431 aa29.33■■■□□ 2.29
CBX4-201ENST00000269397 CDR2Q01850 454 aa29.33■■■□□ 2.29
CBX4-201ENST00000269397 PAXIP1Q6ZW49 1069 aaPredicted RBP29.33■■■□□ 2.29
CBX4-201ENST00000269397 GBP7Q8N8V2 638 aaPredicted RBP29.33■■■□□ 2.29
CBX4-201ENST00000269397 FRMD4AQ9P2Q2 1039 aaPredicted RBP29.33■■■□□ 2.29
CBX4-201ENST00000269397 RBBP6Q7Z6E9 1792 aaKnown RBP29.32■■■□□ 2.28
CBX4-201ENST00000269397 TOM1O60784 492 aa29.32■■■□□ 2.28
CBX4-201ENST00000269397 MYBPC2Q14324 1141 aa29.32■■■□□ 2.28
CBX4-201ENST00000269397 ECHDC2Q86YB7 292 aa29.32■■■□□ 2.28
CBX4-201ENST00000269397 FAXDC2Q96IV6 333 aa29.32■■■□□ 2.28
CBX4-201ENST00000269397 KRT5P13647 590 aa29.32■■■□□ 2.28
CBX4-201ENST00000269397 GRIPAP1Q4V328 841 aa29.32■■■□□ 2.28
CBX4-201ENST00000269397 CYP4F22Q6NT55 531 aa29.32■■■□□ 2.28
CBX4-201ENST00000269397 MIER3Q7Z3K6 550 aa29.32■■■□□ 2.28
CBX4-201ENST00000269397 KLHL14Q9P2G3 628 aa29.32■■■□□ 2.28
CBX4-201ENST00000269397 PEX3P56589 373 aa29.31■■■□□ 2.28
CBX4-201ENST00000269397 ASRGL1Q7L266 308 aa29.31■■■□□ 2.28
CBX4-201ENST00000269397 KCNV2Q8TDN2 545 aa29.31■■■□□ 2.28
CBX4-201ENST00000269397 KIFC3Q9BVG8 833 aa29.31■■■□□ 2.28
CBX4-201ENST00000269397 ADAM22Q9P0K1 906 aa29.31■■■□□ 2.28
CBX4-201ENST00000269397 VIL1P09327 827 aaKnown RBP29.31■■■□□ 2.28
CBX4-201ENST00000269397 RRM1P23921 792 aa29.31■■■□□ 2.28
CBX4-201ENST00000269397 TAS1R2Q8TE23 839 aa29.31■■■□□ 2.28
CBX4-201ENST00000269397 SLCO2A1Q92959 643 aa29.31■■■□□ 2.28
CBX4-201ENST00000269397 IFT74Q96LB3 600 aa29.31■■■□□ 2.28
CBX4-201ENST00000269397 PI4K2AQ9BTU6 479 aa29.31■■■□□ 2.28
CBX4-201ENST00000269397 IDI2Q9BXS1 227 aa29.31■■■□□ 2.28
CBX4-201ENST00000269397 DCLK3Q9C098 648 aa29.31■■■□□ 2.28
CBX4-201ENST00000269397 ETNK1Q9HBU6 452 aa29.31■■■□□ 2.28
CBX4-201ENST00000269397 NKIRAS1Q9NYS0 192 aa29.31■■■□□ 2.28
CBX4-201ENST00000269397 ZHX2Q9Y6X8 837 aa29.31■■■□□ 2.28
CBX4-201ENST00000269397 ZNFX1Q9P2E3 1918 aaKnown RBP29.31■■■□□ 2.28
CBX4-201ENST00000269397 SPAG7O75391 227 aa29.3■■■□□ 2.28
CBX4-201ENST00000269397 PTK6Q13882 451 aa29.3■■■□□ 2.28
CBX4-201ENST00000269397 TMEM63BQ5T3F8 832 aa29.3■■■□□ 2.28
CBX4-201ENST00000269397 HELQQ8TDG4 1101 aa29.3■■■□□ 2.28
CBX4-201ENST00000269397 C7orf43Q8WVR3 580 aa29.3■■■□□ 2.28
CBX4-201ENST00000269397 SPOCK2Q92563 424 aa29.3■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms