RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 MAGEB2O15479 319 aa17.74■□□□□ 0.43
PHRF1-201ENST00000264555 ITIH2P19823 946 aa17.74■□□□□ 0.43
PHRF1-201ENST00000264555 MAGEA9P43362 315 aa17.74■□□□□ 0.43
PHRF1-201ENST00000264555 ZNF710Q8N1W2 664 aa17.74■□□□□ 0.43
PHRF1-201ENST00000264555 IQCA1LA6NCM1 817 aa17.73■□□□□ 0.43
PHRF1-201ENST00000264555 DCTN3O75935 186 aa17.73■□□□□ 0.43
PHRF1-201ENST00000264555 ARSEP51690 589 aa17.73■□□□□ 0.43
PHRF1-201ENST00000264555 FKBP1AP62942 108 aaKnown RBP17.73■□□□□ 0.43
PHRF1-201ENST00000264555 COL9A3Q14050 684 aaPredicted RBP17.73■□□□□ 0.43
PHRF1-201ENST00000264555 IER5Q5VY09 327 aa17.73■□□□□ 0.43
PHRF1-201ENST00000264555 HIBCHQ6NVY1 386 aaPredicted RBP17.73■□□□□ 0.43
PHRF1-201ENST00000264555 MMS22LQ6ZRQ5 1243 aa17.73■□□□□ 0.43
PHRF1-201ENST00000264555 ZBED8Q8IZ13 594 aa17.73■□□□□ 0.43
PHRF1-201ENST00000264555 OLFML3Q9NRN5 406 aa17.73■□□□□ 0.43
PHRF1-201ENST00000264555 MAGED2Q9UNF1 606 aaPredicted RBP17.73■□□□□ 0.43
PHRF1-201ENST00000264555 DUSP10Q9Y6W6 482 aa17.73■□□□□ 0.43
PHRF1-201ENST00000264555 ACTR2P61160 394 aa17.73■□□□□ 0.43
PHRF1-201ENST00000264555 ZNF720Q7Z2F6 126 aa17.73■□□□□ 0.43
PHRF1-201ENST00000264555 ATP11CQ8NB49 1132 aa17.73■□□□□ 0.43
PHRF1-201ENST00000264555 ZNF560Q96MR9 790 aa17.73■□□□□ 0.43
PHRF1-201ENST00000264555 ISCUQ9H1K1 167 aa17.73■□□□□ 0.43
PHRF1-201ENST00000264555 CASP4P49662 377 aa17.73■□□□□ 0.43
PHRF1-201ENST00000264555 RBP5P82980 135 aa17.73■□□□□ 0.43
PHRF1-201ENST00000264555 STILQ15468 1287 aa17.73■□□□□ 0.43
PHRF1-201ENST00000264555 WDR93Q6P2C0 686 aa17.73■□□□□ 0.43
PHRF1-201ENST00000264555 SH3BP5O60239 455 aa17.73■□□□□ 0.43
PHRF1-201ENST00000264555 H2AFXP16104 143 aaPredicted RBP17.73■□□□□ 0.43
PHRF1-201ENST00000264555 CDH6P55285 790 aa17.73■□□□□ 0.43
PHRF1-201ENST00000264555 NOP14P78316 857 aaKnown RBP17.73■□□□□ 0.43
PHRF1-201ENST00000264555 PCNX4Q63HM2 1172 aa17.73■□□□□ 0.43
PHRF1-201ENST00000264555 FAM83AQ86UY5 434 aa17.73■□□□□ 0.43
PHRF1-201ENST00000264555 CHMP6Q96FZ7 201 aa17.73■□□□□ 0.43
PHRF1-201ENST00000264555 TMEM117Q9H0C3 514 aa17.73■□□□□ 0.43
PHRF1-201ENST00000264555 KLHL8Q9P2G9 620 aaPredicted RBP17.73■□□□□ 0.43
PHRF1-201ENST00000264555 AKAP12Q02952 1782 aa17.72■□□□□ 0.43
PHRF1-201ENST00000264555 STAT4Q14765 748 aa17.72■□□□□ 0.43
PHRF1-201ENST00000264555 TRMT10CQ7L0Y3 403 aaKnown RBP17.72■□□□□ 0.43
PHRF1-201ENST00000264555 LACRTQ9GZZ8 138 aa17.72■□□□□ 0.43
PHRF1-201ENST00000264555 CARD9Q9H257 536 aa17.72■□□□□ 0.43
PHRF1-201ENST00000264555 AGAP1Q9UPQ3 857 aa17.72■□□□□ 0.43
PHRF1-201ENST00000264555 FGFR4P22455 802 aa17.72■□□□□ 0.43
PHRF1-201ENST00000264555 CARSP49589 748 aaKnown RBP17.72■□□□□ 0.43
PHRF1-201ENST00000264555 PIGHQ14442 188 aaPredicted RBP17.72■□□□□ 0.43
PHRF1-201ENST00000264555 CDKL3Q8IVW4 592 aaPredicted RBP17.72■□□□□ 0.43
PHRF1-201ENST00000264555 ARHGAP20Q9P2F6 1191 aa17.72■□□□□ 0.43
PHRF1-201ENST00000264555 PPP1R9AQ9ULJ8 1098 aa17.72■□□□□ 0.43
PHRF1-201ENST00000264555 PEAK1Q9H792 1746 aa17.72■□□□□ 0.43
PHRF1-201ENST00000264555 TYW5A2RUC4 315 aaKnown RBP17.72■□□□□ 0.43
PHRF1-201ENST00000264555 IL18RAPO95256 599 aa17.72■□□□□ 0.43
PHRF1-201ENST00000264555 ZFXP17010 805 aaPredicted RBP17.72■□□□□ 0.43
PHRF1-201ENST00000264555 GUCY2CP25092 1073 aa17.72■□□□□ 0.43
PHRF1-201ENST00000264555 SESN3P58005 492 aa17.72■□□□□ 0.43
PHRF1-201ENST00000264555 TADA2BQ86TJ2 420 aa17.72■□□□□ 0.43
PHRF1-201ENST00000264555 JAMLQ86YT9 394 aa17.72■□□□□ 0.43
PHRF1-201ENST00000264555 DONSONQ9NYP3 566 aa17.72■□□□□ 0.43
PHRF1-201ENST00000264555 AKAP3O75969 853 aa17.72■□□□□ 0.43
PHRF1-201ENST00000264555 GH1P01241 217 aa17.72■□□□□ 0.43
PHRF1-201ENST00000264555 BACE1P56817 501 aa17.72■□□□□ 0.43
PHRF1-201ENST00000264555 DDR1Q08345 913 aa17.72■□□□□ 0.43
PHRF1-201ENST00000264555 RWDD4Q6NW29 188 aaKnown RBP17.72■□□□□ 0.43
PHRF1-201ENST00000264555 TRIM55Q9BYV6 548 aa17.72■□□□□ 0.43
PHRF1-201ENST00000264555 NUF2Q9BZD4 464 aa17.72■□□□□ 0.43
PHRF1-201ENST00000264555 CAPN6Q9Y6Q1 641 aa17.72■□□□□ 0.43
PHRF1-201ENST00000264555 AGTP01019 485 aa17.71■□□□□ 0.43
PHRF1-201ENST00000264555 CYP2C19P33261 490 aa17.71■□□□□ 0.43
PHRF1-201ENST00000264555 RHBDL3P58872 404 aa17.71■□□□□ 0.43
PHRF1-201ENST00000264555 SNAPC2Q13487 334 aa17.71■□□□□ 0.43
PHRF1-201ENST00000264555 MYBPC2Q14324 1141 aa17.71■□□□□ 0.43
PHRF1-201ENST00000264555 HEATR6Q6AI08 1181 aaKnown RBP17.71■□□□□ 0.43
PHRF1-201ENST00000264555 RAB44Q7Z6P3 723 aaPredicted RBP17.71■□□□□ 0.43
PHRF1-201ENST00000264555 GTF3C2Q8WUA4 911 aaPredicted RBP17.71■□□□□ 0.43
PHRF1-201ENST00000264555 PNKPQ96T60 521 aa17.71■□□□□ 0.43
PHRF1-201ENST00000264555 DUSP9Q99956 384 aaKnown RBP17.71■□□□□ 0.43
PHRF1-201ENST00000264555 GTF3C4Q9UKN8 822 aa17.71■□□□□ 0.43
PHRF1-201ENST00000264555 LRRC10BA6NIK2 292 aa17.71■□□□□ 0.43
PHRF1-201ENST00000264555 FOXN3O00409 490 aaPredicted RBP17.71■□□□□ 0.43
PHRF1-201ENST00000264555 PPP1R37O75864 691 aa17.71■□□□□ 0.43
PHRF1-201ENST00000264555 ARPP19P56211 112 aa17.71■□□□□ 0.43
PHRF1-201ENST00000264555 COG7P83436 770 aa17.71■□□□□ 0.43
PHRF1-201ENST00000264555 TTC17Q96AE7 1141 aa17.71■□□□□ 0.43
PHRF1-201ENST00000264555 GTPBP10A4D1E9 387 aaKnown RBP17.71■□□□□ 0.43
PHRF1-201ENST00000264555 SMIM22K7EJ46 135 aa17.71■□□□□ 0.43
PHRF1-201ENST00000264555 GUCY1A3Q02108 690 aa17.71■□□□□ 0.43
PHRF1-201ENST00000264555 KIFC3Q9BVG8 833 aa17.71■□□□□ 0.43
PHRF1-201ENST00000264555 ADORA2BP29275 332 aa17.71■□□□□ 0.43
PHRF1-201ENST00000264555 MDH1P40925 334 aaKnown RBP17.71■□□□□ 0.43
PHRF1-201ENST00000264555 DACT2Q5SW24 774 aa17.71■□□□□ 0.43
PHRF1-201ENST00000264555 ATF7IP2Q5U623 682 aa17.71■□□□□ 0.43
PHRF1-201ENST00000264555 TRIM68Q6AZZ1 485 aa17.71■□□□□ 0.43
PHRF1-201ENST00000264555 OR6J1Q8NGC5 347 aa17.71■□□□□ 0.43
PHRF1-201ENST00000264555 ZKSCAN4Q969J2 545 aaPredicted RBP17.71■□□□□ 0.43
PHRF1-201ENST00000264555 MTMR9Q96QG7 549 aa17.71■□□□□ 0.43
PHRF1-201ENST00000264555 ERP44Q9BS26 406 aa17.71■□□□□ 0.43
PHRF1-201ENST00000264555 THAP2Q9H0W7 228 aa17.71■□□□□ 0.43
PHRF1-201ENST00000264555 GOLPH3Q9H4A6 298 aa17.71■□□□□ 0.43
PHRF1-201ENST00000264555 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.71■□□□□ 0.43
PHRF1-201ENST00000264555 TNIP3Q96KP6 325 aa17.7■□□□□ 0.42
PHRF1-201ENST00000264555 TARS2Q9BW92 718 aaKnown RBP17.7■□□□□ 0.42
PHRF1-201ENST00000264555 BLOC1S4Q9NUP1 217 aa17.7■□□□□ 0.42
PHRF1-201ENST00000264555 GTF2H1P32780 548 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms