RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 KIF4AO95239 1232 aa17.62■□□□□ 0.41
USE1-201ENST00000263897 C1RP00736 705 aa17.62■□□□□ 0.41
USE1-201ENST00000263897 MARCKSP29966 332 aaPredicted RBP17.62■□□□□ 0.41
USE1-201ENST00000263897 DDIT3P35638 169 aa17.62■□□□□ 0.41
USE1-201ENST00000263897 YARSP54577 528 aaKnown RBP17.62■□□□□ 0.41
USE1-201ENST00000263897 OSTNP61366 133 aa17.62■□□□□ 0.41
USE1-201ENST00000263897 MCM6Q14566 821 aa17.62■□□□□ 0.41
USE1-201ENST00000263897 GLRA4Q5JXX5 417 aa17.62■□□□□ 0.41
USE1-201ENST00000263897 MPZL3Q6UWV2 235 aa17.62■□□□□ 0.41
USE1-201ENST00000263897 HAUS6Q7Z4H7 955 aa17.62■□□□□ 0.41
USE1-201ENST00000263897 GPR149Q86SP6 731 aa17.62■□□□□ 0.41
USE1-201ENST00000263897 RASSF8Q8NHQ8 419 aa17.62■□□□□ 0.41
USE1-201ENST00000263897 RAD54LQ92698 747 aa17.62■□□□□ 0.41
USE1-201ENST00000263897 EDAQ92838 391 aa17.62■□□□□ 0.41
USE1-201ENST00000263897 SNX21Q969T3 373 aa17.62■□□□□ 0.41
USE1-201ENST00000263897 EPSTI1Q96J88 318 aa17.62■□□□□ 0.41
USE1-201ENST00000263897 ACAP3Q96P50 834 aa17.62■□□□□ 0.41
USE1-201ENST00000263897 REEP2Q9BRK0 252 aa17.62■□□□□ 0.41
USE1-201ENST00000263897 SFXN1Q9H9B4 322 aa17.62■□□□□ 0.41
USE1-201ENST00000263897 TOPORSQ9NS56 1045 aaPredicted RBP17.62■□□□□ 0.41
USE1-201ENST00000263897 DPP7Q9UHL4 492 aa17.62■□□□□ 0.41
USE1-201ENST00000263897 NR2E1Q9Y466 385 aa17.62■□□□□ 0.41
USE1-201ENST00000263897 SRPRBQ9Y5M8 271 aaKnown RBP17.62■□□□□ 0.41
USE1-201ENST00000263897 SF3B1O75533 1304 aaKnown RBP eCLIP17.62■□□□□ 0.41
USE1-201ENST00000263897 SPDYE4A6NLX3 237 aa17.61■□□□□ 0.41
USE1-201ENST00000263897 H0YCG3 227 aa17.61■□□□□ 0.41
USE1-201ENST00000263897 STX6O43752 255 aa17.61■□□□□ 0.41
USE1-201ENST00000263897 TOM1L1O75674 476 aa17.61■□□□□ 0.41
USE1-201ENST00000263897 GLUD1P00367 558 aa17.61■□□□□ 0.41
USE1-201ENST00000263897 NCKAP1LP55160 1127 aa17.61■□□□□ 0.41
USE1-201ENST00000263897 SPECC1Q5M775 1068 aa17.61■□□□□ 0.41
USE1-201ENST00000263897 FAM171A1Q5VUB5 890 aa17.61■□□□□ 0.41
USE1-201ENST00000263897 DCLRE1AQ6PJP8 1040 aa17.61■□□□□ 0.41
USE1-201ENST00000263897 ZPBP2Q6X784 338 aa17.61■□□□□ 0.41
USE1-201ENST00000263897 USP49Q70CQ1 688 aa17.61■□□□□ 0.41
USE1-201ENST00000263897 PALB2Q86YC2 1186 aa17.61■□□□□ 0.41
USE1-201ENST00000263897 FEZF2Q8TBJ5 459 aa17.61■□□□□ 0.41
USE1-201ENST00000263897 HASPINQ8TF76 798 aa17.61■□□□□ 0.41
USE1-201ENST00000263897 HDAC7Q8WUI4 952 aa17.61■□□□□ 0.41
USE1-201ENST00000263897 KCNN1Q92952 543 aa17.61■□□□□ 0.41
USE1-201ENST00000263897 TTPALQ9BTX7 342 aa17.61■□□□□ 0.41
USE1-201ENST00000263897 ZSCAN16Q9H4T2 348 aaPredicted RBP17.61■□□□□ 0.41
USE1-201ENST00000263897 FBXO2Q9UK22 296 aaPredicted RBP17.61■□□□□ 0.41
USE1-201ENST00000263897 TECTAO75443 2155 aa17.61■□□□□ 0.41
USE1-201ENST00000263897 MTCL1Q9Y4B5 1905 aaKnown RBP17.6■□□□□ 0.41
USE1-201ENST00000263897 SPATA31D3P0C874 917 aa17.6■□□□□ 0.41
USE1-201ENST00000263897 SP100P23497 879 aaPredicted RBP17.6■□□□□ 0.41
USE1-201ENST00000263897 ZNF131P52739 623 aa17.6■□□□□ 0.41
USE1-201ENST00000263897 ZXDAP98168 799 aa17.6■□□□□ 0.41
USE1-201ENST00000263897 CREMQ03060 361 aa17.6■□□□□ 0.41
USE1-201ENST00000263897 CEBPZQ03701 1054 aaKnown RBP17.6■□□□□ 0.41
USE1-201ENST00000263897 ELAVL2Q12926 359 aaKnown RBP17.6■□□□□ 0.41
USE1-201ENST00000263897 RTP2Q5QGT7 225 aa17.6■□□□□ 0.41
USE1-201ENST00000263897 LILRA6Q6PI73 481 aa17.6■□□□□ 0.41
USE1-201ENST00000263897 PRSS55Q6UWB4 352 aaPredicted RBP17.6■□□□□ 0.41
USE1-201ENST00000263897 C15orf39Q6ZRI6 1047 aa17.6■□□□□ 0.41
USE1-201ENST00000263897 SPATA31D4Q6ZUB0 917 aa17.6■□□□□ 0.41
USE1-201ENST00000263897 CEP57Q86XR8 500 aa17.6■□□□□ 0.41
USE1-201ENST00000263897 MYCT1Q8N699 235 aa17.6■□□□□ 0.41
USE1-201ENST00000263897 CMASQ8NFW8 434 aaPredicted RBP17.6■□□□□ 0.41
USE1-201ENST00000263897 LARP4BQ92615 738 aaKnown RBP17.6■□□□□ 0.41
USE1-201ENST00000263897 UROC1Q96N76 676 aa17.6■□□□□ 0.41
USE1-201ENST00000263897 MAN1C1Q9NR34 630 aa17.6■□□□□ 0.41
USE1-201ENST00000263897 TSHZ2Q9NRE2 1034 aa17.6■□□□□ 0.41
USE1-201ENST00000263897 CITO14578 2027 aa17.6■□□□□ 0.41
USE1-201ENST00000263897 PLXNA3P51805 1871 aa17.59■□□□□ 0.41
USE1-201ENST00000263897 C2CD4DB7Z1M9 353 aa17.59■□□□□ 0.41
USE1-201ENST00000263897 TMEM189-UBE2V1I3L0A0 370 aa17.59■□□□□ 0.41
USE1-201ENST00000263897 CLDN3O15551 220 aa17.59■□□□□ 0.41
USE1-201ENST00000263897 TGM5O43548 720 aa17.59■□□□□ 0.41
USE1-201ENST00000263897 B3GAT3O94766 335 aa17.59■□□□□ 0.41
USE1-201ENST00000263897 FAM13AO94988 1023 aa17.59■□□□□ 0.41
USE1-201ENST00000263897 KRT18P05783 430 aaKnown RBP17.59■□□□□ 0.41
USE1-201ENST00000263897 KCNE1P15382 129 aa17.59■□□□□ 0.41
USE1-201ENST00000263897 RPL17P18621 184 aaKnown RBP17.59■□□□□ 0.41
USE1-201ENST00000263897 SCP2P22307 547 aa17.59■□□□□ 0.41
USE1-201ENST00000263897 IGFBP6P24592 240 aaPredicted RBP17.59■□□□□ 0.41
USE1-201ENST00000263897 CLCNKBP51801 687 aa17.59■□□□□ 0.41
USE1-201ENST00000263897 SLC39A14Q15043 492 aa17.59■□□□□ 0.41
USE1-201ENST00000263897 UPP1Q16831 310 aa17.59■□□□□ 0.41
USE1-201ENST00000263897 ELMSAN1Q6PJG2 1045 aa17.59■□□□□ 0.41
USE1-201ENST00000263897 CD300LGQ6UXG3 332 aa17.59■□□□□ 0.41
USE1-201ENST00000263897 GLYCTKQ8IVS8 523 aa17.59■□□□□ 0.41
USE1-201ENST00000263897 LNX1Q8TBB1 728 aaPredicted RBP17.59■□□□□ 0.41
USE1-201ENST00000263897 PIK3R5Q8WYR1 880 aa17.59■□□□□ 0.41
USE1-201ENST00000263897 DDX27Q96GQ7 796 aaKnown RBP17.59■□□□□ 0.41
USE1-201ENST00000263897 SNX27Q96L92 541 aa17.59■□□□□ 0.41
USE1-201ENST00000263897 ZMAT2Q96NC0 199 aaKnown RBP17.59■□□□□ 0.41
USE1-201ENST00000263897 CLIC6Q96NY7 704 aa17.59■□□□□ 0.41
USE1-201ENST00000263897 USP28Q96RU2 1077 aa17.59■□□□□ 0.41
USE1-201ENST00000263897 PLEKHA4Q9H4M7 779 aa17.59■□□□□ 0.41
USE1-201ENST00000263897 PARVGQ9HBI0 331 aa17.59■□□□□ 0.41
USE1-201ENST00000263897 SLC38A7Q9NVC3 462 aa17.59■□□□□ 0.41
USE1-201ENST00000263897 CCDC39Q9UFE4 941 aa17.59■□□□□ 0.41
USE1-201ENST00000263897 USTQ9Y2C2 406 aa17.59■□□□□ 0.41
USE1-201ENST00000263897 MORC2Q9Y6X9 1032 aaPredicted RBP17.59■□□□□ 0.41
USE1-201ENST00000263897 CCDC195A0A1B0GUA6 201 aa17.58■□□□□ 0.4
USE1-201ENST00000263897 MEFVO15553 781 aaPredicted RBP17.58■□□□□ 0.4
USE1-201ENST00000263897 TRAK2O60296 914 aa17.58■□□□□ 0.4
USE1-201ENST00000263897 HARSP12081 509 aaKnown RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms