RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 COL24A1Q17RW2 1714 aa13.23□□□□□ -0.29
CHMP3-201ENST00000263856 PI4K2BG5E9Z4 385 aa13.23□□□□□ -0.29
CHMP3-201ENST00000263856 GAS8O95995 478 aa13.23□□□□□ -0.29
CHMP3-201ENST00000263856 MPP2Q14168 576 aa13.23□□□□□ -0.29
CHMP3-201ENST00000263856 XKR9Q5GH70 373 aa13.23□□□□□ -0.29
CHMP3-201ENST00000263856 MICAL1Q8TDZ2 1067 aa13.23□□□□□ -0.29
CHMP3-201ENST00000263856 SPOCK2Q92563 424 aa13.23□□□□□ -0.29
CHMP3-201ENST00000263856 AGBL1Q96MI9 1066 aa13.23□□□□□ -0.29
CHMP3-201ENST00000263856 CRAMP1Q96RY5 1269 aa13.23□□□□□ -0.29
CHMP3-201ENST00000263856 HERPUD2Q9BSE4 406 aa13.23□□□□□ -0.29
CHMP3-201ENST00000263856 ETNK1Q9HBU6 452 aa13.23□□□□□ -0.29
CHMP3-201ENST00000263856 KDM4FA0A1W2PPD8 638 aa13.23□□□□□ -0.29
CHMP3-201ENST00000263856 RASA4BC9J798 803 aa13.23□□□□□ -0.29
CHMP3-201ENST00000263856 RASA4O43374 803 aa13.23□□□□□ -0.29
CHMP3-201ENST00000263856 SLC26A4O43511 780 aa13.23□□□□□ -0.29
CHMP3-201ENST00000263856 ATF7P17544 494 aaPredicted RBP13.23□□□□□ -0.29
CHMP3-201ENST00000263856 KRT15P19012 456 aa13.23□□□□□ -0.29
CHMP3-201ENST00000263856 DNAJC3Q13217 504 aa13.23□□□□□ -0.29
CHMP3-201ENST00000263856 CLUL1Q15846 466 aa13.23□□□□□ -0.29
CHMP3-201ENST00000263856 VSTM1Q6UX27 236 aa13.23□□□□□ -0.29
CHMP3-201ENST00000263856 C4orf33Q8N1A6 199 aa13.23□□□□□ -0.29
CHMP3-201ENST00000263856 FITM2Q8N6M3 262 aa13.23□□□□□ -0.29
CHMP3-201ENST00000263856 SNF8Q96H20 258 aa13.23□□□□□ -0.29
CHMP3-201ENST00000263856 NT5C1BQ96P26 610 aa13.23□□□□□ -0.29
CHMP3-201ENST00000263856 TMEM237Q96Q45 408 aa13.23□□□□□ -0.29
CHMP3-201ENST00000263856 ARHGEF10LQ9HCE6 1279 aa13.23□□□□□ -0.29
CHMP3-201ENST00000263856 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.23□□□□□ -0.29
CHMP3-201ENST00000263856 CNOT7Q9UIV1 285 aaKnown RBP13.23□□□□□ -0.29
CHMP3-201ENST00000263856 ZHX2Q9Y6X8 837 aa13.23□□□□□ -0.29
CHMP3-201ENST00000263856 WDR91A4D1P6 747 aa13.22□□□□□ -0.29
CHMP3-201ENST00000263856 H0Y3Z8 333 aa13.22□□□□□ -0.29
CHMP3-201ENST00000263856 POLRMTO00411 1230 aaKnown RBP13.22□□□□□ -0.29
CHMP3-201ENST00000263856 UPP2O95045 317 aa13.22□□□□□ -0.29
CHMP3-201ENST00000263856 CETPP11597 493 aa13.22□□□□□ -0.29
CHMP3-201ENST00000263856 EIF2AK2P19525 551 aaKnown RBP13.22□□□□□ -0.29
CHMP3-201ENST00000263856 DRG2P55039 364 aaKnown RBP13.22□□□□□ -0.29
CHMP3-201ENST00000263856 COPS2P61201 443 aa13.22□□□□□ -0.29
CHMP3-201ENST00000263856 RNASELQ05823 741 aaKnown RBP13.22□□□□□ -0.29
CHMP3-201ENST00000263856 PPP2R5CQ13362 524 aa13.22□□□□□ -0.29
CHMP3-201ENST00000263856 SNRNP35Q16560 246 aaKnown RBP13.22□□□□□ -0.29
CHMP3-201ENST00000263856 ERICH1Q86X53 443 aa13.22□□□□□ -0.29
CHMP3-201ENST00000263856 IL31RAQ8NI17 732 aa13.22□□□□□ -0.29
CHMP3-201ENST00000263856 POMGNT1Q8WZA1 660 aa13.22□□□□□ -0.29
CHMP3-201ENST00000263856 RPS6KC1Q96S38 1066 aa13.22□□□□□ -0.29
CHMP3-201ENST00000263856 C11orf70Q9BRQ4 267 aa13.22□□□□□ -0.29
CHMP3-201ENST00000263856 PITPNM3Q9BZ71 974 aa13.22□□□□□ -0.29
CHMP3-201ENST00000263856 EHMT1Q9H9B1 1298 aa13.22□□□□□ -0.29
CHMP3-201ENST00000263856 AAASQ9NRG9 546 aa13.22□□□□□ -0.29
CHMP3-201ENST00000263856 PCDHA3Q9Y5H8 950 aa13.22□□□□□ -0.29
CHMP3-201ENST00000263856 RGL2O15211 777 aa13.22□□□□□ -0.29
CHMP3-201ENST00000263856 RALAP11233 206 aa13.22□□□□□ -0.29
CHMP3-201ENST00000263856 RRM1P23921 792 aa13.22□□□□□ -0.29
CHMP3-201ENST00000263856 LACTBP83111 547 aaPredicted RBP13.22□□□□□ -0.29
CHMP3-201ENST00000263856 RPAINQ86UA6 219 aa13.22□□□□□ -0.29
CHMP3-201ENST00000263856 MIEF2Q96C03 454 aa13.22□□□□□ -0.29
CHMP3-201ENST00000263856 ACSF2Q96CM8 615 aaPredicted RBP13.22□□□□□ -0.29
CHMP3-201ENST00000263856 GMCL1Q96IK5 515 aa13.22□□□□□ -0.29
CHMP3-201ENST00000263856 ZDHHC15Q96MV8 337 aa13.22□□□□□ -0.29
CHMP3-201ENST00000263856 TMEM206Q9H813 350 aa13.22□□□□□ -0.29
CHMP3-201ENST00000263856 KIF9Q9HAQ2 790 aa13.22□□□□□ -0.29
CHMP3-201ENST00000263856 GOLGA8SH3BPF8 625 aa13.22□□□□□ -0.29
CHMP3-201ENST00000263856 GOLGA8MH3BSY2 632 aa13.22□□□□□ -0.29
CHMP3-201ENST00000263856 ALAS1P13196 640 aa13.22□□□□□ -0.29
CHMP3-201ENST00000263856 ATP5DP30049 168 aa13.22□□□□□ -0.29
CHMP3-201ENST00000263856 GBP1P32455 592 aa13.22□□□□□ -0.29
CHMP3-201ENST00000263856 VPS72Q15906 364 aa13.22□□□□□ -0.29
CHMP3-201ENST00000263856 FAM182AQ5T1J6 154 aa13.22□□□□□ -0.29
CHMP3-201ENST00000263856 CROCCP2Q86T23 111 aa13.22□□□□□ -0.29
CHMP3-201ENST00000263856 PRMT6Q96LA8 375 aaPredicted RBP13.22□□□□□ -0.29
CHMP3-201ENST00000263856 GLIS2Q9BZE0 524 aaPredicted RBP13.22□□□□□ -0.29
CHMP3-201ENST00000263856 KCNH7Q9NS40 1196 aa13.22□□□□□ -0.29
CHMP3-201ENST00000263856 NOCTQ9UK39 431 aaKnown RBP13.22□□□□□ -0.29
CHMP3-201ENST00000263856 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.22□□□□□ -0.29
CHMP3-201ENST00000263856 SUGT1Q9Y2Z0 365 aa13.22□□□□□ -0.29
CHMP3-201ENST00000263856 ECE2O60344 883 aa13.21□□□□□ -0.29
CHMP3-201ENST00000263856 IFNB1P01574 187 aa13.21□□□□□ -0.29
CHMP3-201ENST00000263856 HARSP12081 509 aaKnown RBP13.21□□□□□ -0.29
CHMP3-201ENST00000263856 TARSP26639 723 aaKnown RBP13.21□□□□□ -0.29
CHMP3-201ENST00000263856 SPDYCQ5MJ68 293 aa13.21□□□□□ -0.29
CHMP3-201ENST00000263856 MEX3CQ5U5Q3 659 aaKnown RBP13.21□□□□□ -0.29
CHMP3-201ENST00000263856 IZUMO3Q5VZ72 239 aa13.21□□□□□ -0.29
CHMP3-201ENST00000263856 TRMT10CQ7L0Y3 403 aaKnown RBP13.21□□□□□ -0.29
CHMP3-201ENST00000263856 CYFIP1Q7L576 1253 aa13.21□□□□□ -0.29
CHMP3-201ENST00000263856 LDHDQ86WU2 507 aa13.21□□□□□ -0.29
CHMP3-201ENST00000263856 VPS37BQ9H9H4 285 aa13.21□□□□□ -0.29
CHMP3-201ENST00000263856 ATP6V0A4Q9HBG4 840 aa13.21□□□□□ -0.29
CHMP3-201ENST00000263856 NINJ2Q9NZG7 142 aa13.21□□□□□ -0.29
CHMP3-201ENST00000263856 CCPG1Q9ULG6 757 aa13.21□□□□□ -0.29
CHMP3-201ENST00000263856 NAALADL1Q9UQQ1 740 aa13.21□□□□□ -0.29
CHMP3-201ENST00000263856 ARL2BPQ9Y2Y0 163 aa13.21□□□□□ -0.29
CHMP3-201ENST00000263856 GGPS1O95749 300 aa13.21□□□□□ -0.3
CHMP3-201ENST00000263856 TTC4O95801 387 aa13.21□□□□□ -0.3
CHMP3-201ENST00000263856 ITGB5P18084 799 aa13.21□□□□□ -0.3
CHMP3-201ENST00000263856 ZNF131P52739 623 aa13.21□□□□□ -0.3
CHMP3-201ENST00000263856 ATP11AP98196 1134 aa13.21□□□□□ -0.3
CHMP3-201ENST00000263856 PLCB3Q01970 1234 aa13.21□□□□□ -0.3
CHMP3-201ENST00000263856 SIX1Q15475 284 aaPredicted RBP13.21□□□□□ -0.3
CHMP3-201ENST00000263856 SLC15A2Q16348 729 aa13.21□□□□□ -0.3
CHMP3-201ENST00000263856 AOC3Q16853 763 aa13.21□□□□□ -0.3
CHMP3-201ENST00000263856 C1orf220Q5T0J3 134 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms