RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 SLC26A7Q8TE54 656 aa16.92■□□□□ 0.3
PRPF40B-201ENST00000261897 CLPTM1LQ96KA5 538 aa16.92■□□□□ 0.3
PRPF40B-201ENST00000261897 DNAJC1Q96KC8 554 aaKnown RBP16.92■□□□□ 0.3
PRPF40B-201ENST00000261897 SERPINB12Q96P63 405 aa16.92■□□□□ 0.3
PRPF40B-201ENST00000261897 EPB41L4BQ9H329 900 aa16.92■□□□□ 0.3
PRPF40B-201ENST00000261897 SYNCQ9H7C4 482 aa16.92■□□□□ 0.3
PRPF40B-201ENST00000261897 DNAJC18Q9H819 358 aa16.92■□□□□ 0.3
PRPF40B-201ENST00000261897 CCDC87Q9NVE4 849 aa16.92■□□□□ 0.3
PRPF40B-201ENST00000261897 NINJ2Q9NZG7 142 aa16.92■□□□□ 0.3
PRPF40B-201ENST00000261897 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.92■□□□□ 0.3
PRPF40B-201ENST00000261897 MIF4GDA9UHW6 222 aaKnown RBP16.92■□□□□ 0.3
PRPF40B-201ENST00000261897 O00370 1275 aa16.92■□□□□ 0.3
PRPF40B-201ENST00000261897 GPS1Q13098 491 aa16.92■□□□□ 0.3
PRPF40B-201ENST00000261897 CCDC174Q6PII3 467 aa16.92■□□□□ 0.3
PRPF40B-201ENST00000261897 RASSF3Q86WH2 238 aa16.92■□□□□ 0.3
PRPF40B-201ENST00000261897 UTP4Q969X6 686 aaKnown RBP16.92■□□□□ 0.3
PRPF40B-201ENST00000261897 SPZ1Q9BXG8 430 aa16.92■□□□□ 0.3
PRPF40B-201ENST00000261897 C10orf88Q9H8K7 445 aa16.92■□□□□ 0.3
PRPF40B-201ENST00000261897 HNRNPRO43390 633 aaKnown RBP16.91■□□□□ 0.3
PRPF40B-201ENST00000261897 PGM3O95394 542 aa16.91■□□□□ 0.3
PRPF40B-201ENST00000261897 PDIA2Q13087 525 aaKnown RBP16.91■□□□□ 0.3
PRPF40B-201ENST00000261897 EPHA7Q15375 998 aa16.91■□□□□ 0.3
PRPF40B-201ENST00000261897 GRIK5Q16478 980 aa16.91■□□□□ 0.3
PRPF40B-201ENST00000261897 PALM2Q8IXS6 379 aa16.91■□□□□ 0.3
PRPF40B-201ENST00000261897 ADGRF4Q8IZF3 695 aa16.91■□□□□ 0.3
PRPF40B-201ENST00000261897 NDNQ99608 321 aa16.91■□□□□ 0.3
PRPF40B-201ENST00000261897 TRIM55Q9BYV6 548 aa16.91■□□□□ 0.3
PRPF40B-201ENST00000261897 TYW1Q9NV66 732 aaKnown RBP16.91■□□□□ 0.3
PRPF40B-201ENST00000261897 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.91■□□□□ 0.3
PRPF40B-201ENST00000261897 RNF8O76064 485 aa16.91■□□□□ 0.3
PRPF40B-201ENST00000261897 ADRA1DP25100 572 aa16.91■□□□□ 0.3
PRPF40B-201ENST00000261897 ZYXQ15942 572 aaKnown RBP16.91■□□□□ 0.3
PRPF40B-201ENST00000261897 EFCAB3Q8N7B9 438 aa16.91■□□□□ 0.3
PRPF40B-201ENST00000261897 PRPF31Q8WWY3 499 aaKnown RBP16.91■□□□□ 0.3
PRPF40B-201ENST00000261897 STK33Q9BYT3 514 aa16.91■□□□□ 0.3
PRPF40B-201ENST00000261897 HARSP12081 509 aaKnown RBP16.91■□□□□ 0.3
PRPF40B-201ENST00000261897 BMP3P12645 472 aa16.91■□□□□ 0.3
PRPF40B-201ENST00000261897 KRT10P13645 584 aa16.91■□□□□ 0.3
PRPF40B-201ENST00000261897 MAGEA4P43358 317 aa16.91■□□□□ 0.3
PRPF40B-201ENST00000261897 ALDH18A1P54886 795 aaKnown RBP16.91■□□□□ 0.3
PRPF40B-201ENST00000261897 PSMD6Q15008 389 aa16.91■□□□□ 0.3
PRPF40B-201ENST00000261897 GSDMBQ8TAX9 411 aa16.91■□□□□ 0.3
PRPF40B-201ENST00000261897 CPA5Q8WXQ8 436 aa16.91■□□□□ 0.3
PRPF40B-201ENST00000261897 LRCH1Q9Y2L9 728 aa16.91■□□□□ 0.3
PRPF40B-201ENST00000261897 TNS3Q68CZ2 1445 aa16.91■□□□□ 0.3
PRPF40B-201ENST00000261897 ATP5HO75947 161 aa16.9■□□□□ 0.3
PRPF40B-201ENST00000261897 FXR2P51116 673 aaKnown RBP eCLIP16.9■□□□□ 0.3
PRPF40B-201ENST00000261897 LRRC6Q86X45 466 aa16.9■□□□□ 0.3
PRPF40B-201ENST00000261897 CYP2W1Q8TAV3 490 aa16.9■□□□□ 0.3
PRPF40B-201ENST00000261897 UBE2OQ9C0C9 1292 aaKnown RBP16.9■□□□□ 0.3
PRPF40B-201ENST00000261897 NDE1Q9NXR1 346 aa16.9■□□□□ 0.3
PRPF40B-201ENST00000261897 A0A1W2PPM1 405 aa16.9■□□□□ 0.3
PRPF40B-201ENST00000261897 PYGBP11216 843 aa16.9■□□□□ 0.3
PRPF40B-201ENST00000261897 RALAP11233 206 aa16.9■□□□□ 0.3
PRPF40B-201ENST00000261897 HSPA6P17066 643 aa16.9■□□□□ 0.3
PRPF40B-201ENST00000261897 SCNN1DP51172 638 aa16.9■□□□□ 0.3
PRPF40B-201ENST00000261897 NEK3P51956 506 aa16.9■□□□□ 0.3
PRPF40B-201ENST00000261897 GALNT15Q8N3T1 639 aa16.9■□□□□ 0.3
PRPF40B-201ENST00000261897 TMEM117Q9H0C3 514 aa16.9■□□□□ 0.3
PRPF40B-201ENST00000261897 APEX2Q9UBZ4 518 aa16.9■□□□□ 0.3
PRPF40B-201ENST00000261897 ATRNO75882 1429 aa16.9■□□□□ 0.3
PRPF40B-201ENST00000261897 ZNF804BA4D1E1 1349 aa16.9■□□□□ 0.3
PRPF40B-201ENST00000261897 CETPP11597 493 aa16.9■□□□□ 0.3
PRPF40B-201ENST00000261897 PDIA5Q14554 519 aa16.9■□□□□ 0.3
PRPF40B-201ENST00000261897 LMBRD2Q68DH5 695 aaPredicted RBP16.9■□□□□ 0.3
PRPF40B-201ENST00000261897 RASGEF1CQ8N431 466 aa16.9■□□□□ 0.3
PRPF40B-201ENST00000261897 FAM81AQ8TBF8 368 aa16.9■□□□□ 0.3
PRPF40B-201ENST00000261897 HAS1Q92839 578 aa16.9■□□□□ 0.3
PRPF40B-201ENST00000261897 PHF12Q96QT6 1004 aa16.9■□□□□ 0.3
PRPF40B-201ENST00000261897 ANO3Q9BYT9 981 aa16.9■□□□□ 0.3
PRPF40B-201ENST00000261897 SLC13A1Q9BZW2 595 aa16.9■□□□□ 0.3
PRPF40B-201ENST00000261897 CHCHD3Q9NX63 227 aaKnown RBP16.9■□□□□ 0.3
PRPF40B-201ENST00000261897 ARHGEF35A5YM69 484 aa16.89■□□□□ 0.29
PRPF40B-201ENST00000261897 CCDC22O60826 627 aa16.89■□□□□ 0.29
PRPF40B-201ENST00000261897 TMCO4Q5TGY1 634 aa16.89■□□□□ 0.29
PRPF40B-201ENST00000261897 DPH6Q7L8W6 267 aa16.89■□□□□ 0.29
PRPF40B-201ENST00000261897 ST13P4Q8IZP2 240 aaPredicted RBP16.89■□□□□ 0.29
PRPF40B-201ENST00000261897 MTMR9Q96QG7 549 aa16.89■□□□□ 0.29
PRPF40B-201ENST00000261897 CENPKQ9BS16 269 aa16.89■□□□□ 0.29
PRPF40B-201ENST00000261897 ROPN1BQ9BZX4 212 aaPredicted RBP16.89■□□□□ 0.29
PRPF40B-201ENST00000261897 ROPN1Q9HAT0 212 aaPredicted RBP16.89■□□□□ 0.29
PRPF40B-201ENST00000261897 GALNT8Q9NY28 637 aa16.89■□□□□ 0.29
PRPF40B-201ENST00000261897 PACSIN3Q9UKS6 424 aa16.89■□□□□ 0.29
PRPF40B-201ENST00000261897 MEI4A8MW99 385 aa16.89■□□□□ 0.29
PRPF40B-201ENST00000261897 SORBS3O60504 671 aa16.89■□□□□ 0.29
PRPF40B-201ENST00000261897 GJB6O95452 261 aa16.89■□□□□ 0.29
PRPF40B-201ENST00000261897 ETS1P14921 441 aa16.89■□□□□ 0.29
PRPF40B-201ENST00000261897 VCAM1P19320 739 aa16.89■□□□□ 0.29
PRPF40B-201ENST00000261897 PSMC4P43686 418 aa16.89■□□□□ 0.29
PRPF40B-201ENST00000261897 WDR4P57081 412 aaKnown RBP16.89■□□□□ 0.29
PRPF40B-201ENST00000261897 BTNL9Q6UXG8 535 aa16.89■□□□□ 0.29
PRPF40B-201ENST00000261897 STXBP4Q6ZWJ1 553 aa16.89■□□□□ 0.29
PRPF40B-201ENST00000261897 TTC7BQ86TV6 843 aa16.89■□□□□ 0.29
PRPF40B-201ENST00000261897 EIF1ADQ8N9N8 165 aaKnown RBP16.89■□□□□ 0.29
PRPF40B-201ENST00000261897 DHX38Q92620 1227 aaKnown RBP16.89■□□□□ 0.29
PRPF40B-201ENST00000261897 SLC4A9Q96Q91 983 aa16.89■□□□□ 0.29
PRPF40B-201ENST00000261897 FNBP1Q96RU3 617 aa16.89■□□□□ 0.29
PRPF40B-201ENST00000261897 KCTD10Q9H3F6 313 aa16.89■□□□□ 0.29
PRPF40B-201ENST00000261897 SRP68Q9UHB9 627 aaKnown RBP16.89■□□□□ 0.29
PRPF40B-201ENST00000261897 ABCB11O95342 1321 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms