RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 FAM47CQ5HY64 1035 aa13.73□□□□□ -0.21
TMEM260-201ENST00000261556 PLEKHA7Q6IQ23 1121 aa13.73□□□□□ -0.21
TMEM260-201ENST00000261556 USP17L2Q6R6M4 530 aa13.73□□□□□ -0.21
TMEM260-201ENST00000261556 NLRP9Q7RTR0 991 aa13.73□□□□□ -0.21
TMEM260-201ENST00000261556 FBXO25Q8TCJ0 367 aa13.73□□□□□ -0.21
TMEM260-201ENST00000261556 KANSL2Q9H9L4 492 aa13.73□□□□□ -0.21
TMEM260-201ENST00000261556 GMEB1Q9Y692 573 aa13.73□□□□□ -0.21
TMEM260-201ENST00000261556 EXOC1LA0A1B0GW35 172 aa13.73□□□□□ -0.21
TMEM260-201ENST00000261556 KRT19P08727 400 aa13.73□□□□□ -0.21
TMEM260-201ENST00000261556 HSPA8P11142 646 aaKnown RBP13.73□□□□□ -0.21
TMEM260-201ENST00000261556 NEK3P51956 506 aa13.73□□□□□ -0.21
TMEM260-201ENST00000261556 STAT2P52630 851 aa13.73□□□□□ -0.21
TMEM260-201ENST00000261556 CACNB3P54284 484 aa13.73□□□□□ -0.21
TMEM260-201ENST00000261556 UBXN2AP68543 259 aa13.73□□□□□ -0.21
TMEM260-201ENST00000261556 METTL13Q8N6R0 699 aa13.73□□□□□ -0.21
TMEM260-201ENST00000261556 SUN5Q8TC36 379 aa13.73□□□□□ -0.21
TMEM260-201ENST00000261556 TIPINQ9BVW5 301 aa13.73□□□□□ -0.21
TMEM260-201ENST00000261556 PABPC3Q9H361 631 aaKnown RBP13.73□□□□□ -0.21
TMEM260-201ENST00000261556 ARHGEF3Q9NR81 526 aa13.73□□□□□ -0.21
TMEM260-201ENST00000261556 TMEM98Q9Y2Y6 226 aa13.73□□□□□ -0.21
TMEM260-201ENST00000261556 ATP2A1O14983 1001 aa13.73□□□□□ -0.21
TMEM260-201ENST00000261556 CDH3P22223 829 aa13.73□□□□□ -0.21
TMEM260-201ENST00000261556 PMS1P54277 932 aaKnown RBP13.73□□□□□ -0.21
TMEM260-201ENST00000261556 MKRN3Q13064 507 aaKnown RBP13.73□□□□□ -0.21
TMEM260-201ENST00000261556 UBL4BQ8N7F7 174 aa13.73□□□□□ -0.21
TMEM260-201ENST00000261556 DGCR14Q96DF8 476 aaKnown RBP13.73□□□□□ -0.21
TMEM260-201ENST00000261556 ARMC7Q9H6L4 198 aa13.73□□□□□ -0.21
TMEM260-201ENST00000261556 CAAP1Q9H8G2 361 aa13.73□□□□□ -0.21
TMEM260-201ENST00000261556 RRN3Q9NYV6 651 aa13.73□□□□□ -0.21
TMEM260-201ENST00000261556 C5orf60A6NFR6 353 aa13.73□□□□□ -0.21
TMEM260-201ENST00000261556 PPP1R3GB7ZBB8 358 aa13.73□□□□□ -0.21
TMEM260-201ENST00000261556 TAF4O00268 1085 aa13.73□□□□□ -0.21
TMEM260-201ENST00000261556 TFPTP0C1Z6 253 aa13.73□□□□□ -0.21
TMEM260-201ENST00000261556 NPR1P16066 1061 aa13.73□□□□□ -0.21
TMEM260-201ENST00000261556 TNNI1P19237 187 aa13.73□□□□□ -0.21
TMEM260-201ENST00000261556 XKR9Q5GH70 373 aa13.73□□□□□ -0.21
TMEM260-201ENST00000261556 SMIM5Q71RC9 77 aa13.73□□□□□ -0.21
TMEM260-201ENST00000261556 LPCAT2Q7L5N7 544 aa13.73□□□□□ -0.21
TMEM260-201ENST00000261556 TUBB6Q9BUF5 446 aa13.73□□□□□ -0.21
TMEM260-201ENST00000261556 RNF26Q9BY78 433 aaPredicted RBP13.73□□□□□ -0.21
TMEM260-201ENST00000261556 NOTOA8MTQ0 251 aa13.72□□□□□ -0.21
TMEM260-201ENST00000261556 CBFA2T3O75081 653 aa13.72□□□□□ -0.21
TMEM260-201ENST00000261556 TTLL1O95922 423 aa13.72□□□□□ -0.21
TMEM260-201ENST00000261556 CYP19A1P11511 503 aaPredicted RBP13.72□□□□□ -0.21
TMEM260-201ENST00000261556 CCSAPQ6IQ19 270 aaPredicted RBP13.72□□□□□ -0.21
TMEM260-201ENST00000261556 STK24Q9Y6E0 443 aa13.72□□□□□ -0.21
TMEM260-201ENST00000261556 CYP2J2P51589 502 aa13.72□□□□□ -0.21
TMEM260-201ENST00000261556 LPIN1Q14693 890 aa13.72□□□□□ -0.21
TMEM260-201ENST00000261556 ARHGAP44Q17R89 818 aa13.72□□□□□ -0.21
TMEM260-201ENST00000261556 KLHDC7AQ5VTJ3 777 aa13.72□□□□□ -0.21
TMEM260-201ENST00000261556 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.72□□□□□ -0.21
TMEM260-201ENST00000261556 P2RX5Q93086 422 aa13.72□□□□□ -0.21
TMEM260-201ENST00000261556 GCNAQ96QF7 691 aa13.72□□□□□ -0.21
TMEM260-201ENST00000261556 MAD1L1Q9Y6D9 718 aa13.72□□□□□ -0.21
TMEM260-201ENST00000261556 WASF2Q9Y6W5 498 aa13.72□□□□□ -0.21
TMEM260-201ENST00000261556 SOS2Q07890 1332 aaPredicted RBP13.72□□□□□ -0.21
TMEM260-201ENST00000261556 IQSEC2Q5JU85 1478 aa13.72□□□□□ -0.21
TMEM260-201ENST00000261556 UBE2Q2LH0YL09 131 aa13.72□□□□□ -0.21
TMEM260-201ENST00000261556 SEC24DO94855 1032 aaPredicted RBP13.72□□□□□ -0.21
TMEM260-201ENST00000261556 MCF2P10911 925 aa13.72□□□□□ -0.21
TMEM260-201ENST00000261556 OASLQ15646 514 aaKnown RBP13.72□□□□□ -0.21
TMEM260-201ENST00000261556 ANO4Q32M45 955 aa13.72□□□□□ -0.21
TMEM260-201ENST00000261556 MYOCDQ8IZQ8 938 aa13.72□□□□□ -0.21
TMEM260-201ENST00000261556 ATP2A3Q93084 1043 aa13.72□□□□□ -0.21
TMEM260-201ENST00000261556 TTC17Q96AE7 1141 aa13.72□□□□□ -0.21
TMEM260-201ENST00000261556 DNAJC7Q99615 494 aa13.72□□□□□ -0.21
TMEM260-201ENST00000261556 DDX25Q9UHL0 483 aaKnown RBP13.72□□□□□ -0.21
TMEM260-201ENST00000261556 PITPNM2Q9BZ72 1349 aa13.72□□□□□ -0.21
TMEM260-201ENST00000261556 C21orf59P57076 290 aa13.71□□□□□ -0.21
TMEM260-201ENST00000261556 YWHAGP61981 247 aaKnown RBP eCLIP13.71□□□□□ -0.21
TMEM260-201ENST00000261556 PRAMEP78395 509 aa13.71□□□□□ -0.21
TMEM260-201ENST00000261556 UBE2Q1Q7Z7E8 422 aa13.71□□□□□ -0.21
TMEM260-201ENST00000261556 MREGQ8N565 214 aa13.71□□□□□ -0.21
TMEM260-201ENST00000261556 OXER1Q8TDS5 423 aa13.71□□□□□ -0.21
TMEM260-201ENST00000261556 HEY2Q9UBP5 337 aa13.71□□□□□ -0.21
TMEM260-201ENST00000261556 SEL1LQ9UBV2 794 aa13.71□□□□□ -0.21
TMEM260-201ENST00000261556 MINPP1Q9UNW1 487 aa13.71□□□□□ -0.21
TMEM260-201ENST00000261556 GPR75-ASB3A0A0A6YYF3 556 aa13.71□□□□□ -0.21
TMEM260-201ENST00000261556 SMIM31A0A1B0GVY4 71 aa13.71□□□□□ -0.21
TMEM260-201ENST00000261556 FOXO6A8MYZ6 492 aa13.71□□□□□ -0.21
TMEM260-201ENST00000261556 MATN2O00339 956 aa13.71□□□□□ -0.21
TMEM260-201ENST00000261556 TKTP29401 623 aaKnown RBP13.71□□□□□ -0.21
TMEM260-201ENST00000261556 OTUD4Q01804 1114 aaKnown RBP13.71□□□□□ -0.21
TMEM260-201ENST00000261556 EXOC3L4Q17RC7 722 aa13.71□□□□□ -0.21
TMEM260-201ENST00000261556 CDKAL1Q5VV42 579 aa13.71□□□□□ -0.21
TMEM260-201ENST00000261556 RFWD3Q6PCD5 774 aa13.71□□□□□ -0.21
TMEM260-201ENST00000261556 SHCBP1LQ9BZQ2 653 aa13.71□□□□□ -0.21
TMEM260-201ENST00000261556 ATAD3AQ9NVI7 634 aa13.71□□□□□ -0.21
TMEM260-201ENST00000261556 PI4KBQ9UBF8 816 aa13.71□□□□□ -0.21
TMEM260-201ENST00000261556 ASB3Q9Y575 518 aa13.71□□□□□ -0.21
TMEM260-201ENST00000261556 A0A1W2PQC6 194 aa13.71□□□□□ -0.22
TMEM260-201ENST00000261556 USP17L3A6NCW0 530 aa13.71□□□□□ -0.22
TMEM260-201ENST00000261556 USP17L4A6NCW7 530 aa13.71□□□□□ -0.22
TMEM260-201ENST00000261556 AP3B1O00203 1094 aa13.71□□□□□ -0.22
TMEM260-201ENST00000261556 AFPP02771 609 aaKnown RBP13.71□□□□□ -0.22
TMEM260-201ENST00000261556 MAPK10P53779 464 aa13.71□□□□□ -0.22
TMEM260-201ENST00000261556 ALKBH5Q6P6C2 394 aaKnown RBP13.71□□□□□ -0.22
TMEM260-201ENST00000261556 USP17L1Q7RTZ2 530 aa13.71□□□□□ -0.22
TMEM260-201ENST00000261556 FAM178BQ8IXR5 827 aa13.71□□□□□ -0.22
TMEM260-201ENST00000261556 FAM186BQ8IYM0 893 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms