RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 DENND3A2RUS2 1198 aa20.37■□□□□ 0.85
COL4A3BP-201ENST00000261415 TGFB1I1O43294 461 aa20.37■□□□□ 0.85
COL4A3BP-201ENST00000261415 AP1G2O75843 785 aa20.37■□□□□ 0.85
COL4A3BP-201ENST00000261415 TFRCP02786 760 aaKnown RBP20.37■□□□□ 0.85
COL4A3BP-201ENST00000261415 SMIM10L2AP0DMW4 78 aa20.37■□□□□ 0.85
COL4A3BP-201ENST00000261415 SMIM10L2BP0DMW5 78 aa20.37■□□□□ 0.85
COL4A3BP-201ENST00000261415 IBSPP21815 317 aaPredicted RBP20.37■□□□□ 0.85
COL4A3BP-201ENST00000261415 CLCN3P51790 818 aa20.37■□□□□ 0.85
COL4A3BP-201ENST00000261415 CAPSQ13938 189 aa20.37■□□□□ 0.85
COL4A3BP-201ENST00000261415 MARCH8Q5T0T0 291 aa20.37■□□□□ 0.85
COL4A3BP-201ENST00000261415 MTHFD1LQ6UB35 978 aa20.37■□□□□ 0.85
COL4A3BP-201ENST00000261415 OR8K1Q8NGG5 319 aa20.37■□□□□ 0.85
COL4A3BP-201ENST00000261415 LRRIQ4A6NIV6 560 aa20.36■□□□□ 0.85
COL4A3BP-201ENST00000261415 KCNJ18B7U540 433 aa20.36■□□□□ 0.85
COL4A3BP-201ENST00000261415 CAND2O75155 1236 aa20.36■□□□□ 0.85
COL4A3BP-201ENST00000261415 FECHP22830 423 aa20.36■□□□□ 0.85
COL4A3BP-201ENST00000261415 LSP1P33241 339 aa20.36■□□□□ 0.85
COL4A3BP-201ENST00000261415 FKBP3Q00688 224 aaKnown RBP20.36■□□□□ 0.85
COL4A3BP-201ENST00000261415 KCNJ12Q14500 433 aa20.36■□□□□ 0.85
COL4A3BP-201ENST00000261415 C6orf89Q6UWU4 347 aa20.36■□□□□ 0.85
COL4A3BP-201ENST00000261415 TMTC1Q8IUR5 882 aa20.36■□□□□ 0.85
COL4A3BP-201ENST00000261415 CNGA4Q8IV77 575 aa20.36■□□□□ 0.85
COL4A3BP-201ENST00000261415 C3orf20Q8ND61 904 aa20.36■□□□□ 0.85
COL4A3BP-201ENST00000261415 PPP1R13LQ8WUF5 828 aa20.36■□□□□ 0.85
COL4A3BP-201ENST00000261415 HVCN1Q96D96 273 aa20.36■□□□□ 0.85
COL4A3BP-201ENST00000261415 ACCSQ96QU6 501 aa20.36■□□□□ 0.85
COL4A3BP-201ENST00000261415 TMEM206Q9H813 350 aa20.36■□□□□ 0.85
COL4A3BP-201ENST00000261415 SETD4Q9NVD3 440 aa20.36■□□□□ 0.85
COL4A3BP-201ENST00000261415 NRCAMQ92823 1304 aa20.36■□□□□ 0.85
COL4A3BP-201ENST00000261415 CALUO43852 315 aaPredicted RBP20.36■□□□□ 0.85
COL4A3BP-201ENST00000261415 SKAP2O75563 359 aaPredicted RBP20.36■□□□□ 0.85
COL4A3BP-201ENST00000261415 DNM2P50570 870 aa20.36■□□□□ 0.85
COL4A3BP-201ENST00000261415 SPAG1Q07617 926 aa20.36■□□□□ 0.85
COL4A3BP-201ENST00000261415 IFT88Q13099 833 aa20.36■□□□□ 0.85
COL4A3BP-201ENST00000261415 MXD4Q14582 209 aaPredicted RBP20.36■□□□□ 0.85
COL4A3BP-201ENST00000261415 TCP11X2Q5H9J9 407 aa20.36■□□□□ 0.85
COL4A3BP-201ENST00000261415 KDM7AQ6ZMT4 941 aa20.36■□□□□ 0.85
COL4A3BP-201ENST00000261415 SYCP3Q8IZU3 236 aa20.36■□□□□ 0.85
COL4A3BP-201ENST00000261415 LINC01465Q8N7H1 131 aa20.36■□□□□ 0.85
COL4A3BP-201ENST00000261415 PARD3BQ8TEW8 1205 aa20.36■□□□□ 0.85
COL4A3BP-201ENST00000261415 HMX1Q9NP08 348 aaPredicted RBP20.36■□□□□ 0.85
COL4A3BP-201ENST00000261415 SUCLA2Q9P2R7 463 aaPredicted RBP20.36■□□□□ 0.85
COL4A3BP-201ENST00000261415 TBX20Q9UMR3 447 aa20.36■□□□□ 0.85
COL4A3BP-201ENST00000261415 PTPN22Q9Y2R2 807 aa20.36■□□□□ 0.85
COL4A3BP-201ENST00000261415 A0A1B0GTH6 734 aa20.35■□□□□ 0.85
COL4A3BP-201ENST00000261415 RRN3P2A6NIE6 340 aa20.35■□□□□ 0.85
COL4A3BP-201ENST00000261415 H0YCG3 227 aa20.35■□□□□ 0.85
COL4A3BP-201ENST00000261415 LAMTOR4Q0VGL1 99 aa20.35■□□□□ 0.85
COL4A3BP-201ENST00000261415 E2F5Q15329 346 aa20.35■□□□□ 0.85
COL4A3BP-201ENST00000261415 CAPRIN2Q6IMN6 1127 aaKnown RBP20.35■□□□□ 0.85
COL4A3BP-201ENST00000261415 DRAXINQ8NBI3 349 aaPredicted RBP20.35■□□□□ 0.85
COL4A3BP-201ENST00000261415 KLHDC9Q8NEP7 349 aa20.35■□□□□ 0.85
COL4A3BP-201ENST00000261415 DEPTORQ8TB45 409 aa20.35■□□□□ 0.85
COL4A3BP-201ENST00000261415 MTG1Q9BT17 334 aaPredicted RBP20.35■□□□□ 0.85
COL4A3BP-201ENST00000261415 FGFR1OPO95684 399 aaKnown RBP20.34■□□□□ 0.85
COL4A3BP-201ENST00000261415 RPSAP08865 295 aaKnown RBP20.34■□□□□ 0.85
COL4A3BP-201ENST00000261415 CST5P28325 142 aaPredicted RBP20.34■□□□□ 0.85
COL4A3BP-201ENST00000261415 CXCL17Q6UXB2 119 aa20.34■□□□□ 0.85
COL4A3BP-201ENST00000261415 HS2ST1Q7LGA3 356 aa20.34■□□□□ 0.85
COL4A3BP-201ENST00000261415 APTXQ7Z2E3 356 aaKnown RBP20.34■□□□□ 0.85
COL4A3BP-201ENST00000261415 RHPN2Q8IUC4 686 aa20.34■□□□□ 0.85
COL4A3BP-201ENST00000261415 MAP4K3Q8IVH8 894 aa20.34■□□□□ 0.85
COL4A3BP-201ENST00000261415 FAM114A1Q8IWE2 563 aa20.34■□□□□ 0.85
COL4A3BP-201ENST00000261415 ZC3H3Q8IXZ2 948 aaKnown RBP20.34■□□□□ 0.85
COL4A3BP-201ENST00000261415 SH3TC2Q8TF17 1288 aa20.34■□□□□ 0.85
COL4A3BP-201ENST00000261415 GDAP1L1Q96MZ0 367 aa20.34■□□□□ 0.85
COL4A3BP-201ENST00000261415 SAR1BQ9Y6B6 198 aa20.34■□□□□ 0.85
COL4A3BP-201ENST00000261415 A0A0U1RQJ8 604 aa20.34■□□□□ 0.85
COL4A3BP-201ENST00000261415 MSCO60682 206 aa20.34■□□□□ 0.85
COL4A3BP-201ENST00000261415 HSF2BPO75031 334 aa20.34■□□□□ 0.85
COL4A3BP-201ENST00000261415 FAM107AO95990 144 aa20.34■□□□□ 0.85
COL4A3BP-201ENST00000261415 GJB1P08034 283 aa20.34■□□□□ 0.85
COL4A3BP-201ENST00000261415 NR2F2P24468 414 aa20.34■□□□□ 0.85
COL4A3BP-201ENST00000261415 EEF1GP26641 437 aaKnown RBP20.34■□□□□ 0.85
COL4A3BP-201ENST00000261415 ATRIPQ8WXE1 791 aa20.34■□□□□ 0.85
COL4A3BP-201ENST00000261415 P3H4Q92791 437 aa20.34■□□□□ 0.85
COL4A3BP-201ENST00000261415 KCNN1Q92952 543 aa20.34■□□□□ 0.85
COL4A3BP-201ENST00000261415 CNOT6LQ96LI5 555 aaKnown RBP20.34■□□□□ 0.85
COL4A3BP-201ENST00000261415 CEP63Q96MT8 703 aa20.34■□□□□ 0.85
COL4A3BP-201ENST00000261415 MAGEC2Q9UBF1 373 aaPredicted RBP20.34■□□□□ 0.85
COL4A3BP-201ENST00000261415 LIMA1Q9UHB6 759 aaKnown RBP20.34■□□□□ 0.85
COL4A3BP-201ENST00000261415 MGRN1O60291 552 aa20.33■□□□□ 0.85
COL4A3BP-201ENST00000261415 MFAP3LO75121 409 aa20.33■□□□□ 0.85
COL4A3BP-201ENST00000261415 NR3C1P04150 777 aa20.33■□□□□ 0.85
COL4A3BP-201ENST00000261415 ABCD1P33897 745 aa20.33■□□□□ 0.85
COL4A3BP-201ENST00000261415 PEX19P40855 299 aa20.33■□□□□ 0.85
COL4A3BP-201ENST00000261415 APBA1Q02410 837 aa20.33■□□□□ 0.85
COL4A3BP-201ENST00000261415 RBL2Q08999 1139 aa20.33■□□□□ 0.85
COL4A3BP-201ENST00000261415 ADAM9Q13443 819 aa20.33■□□□□ 0.85
COL4A3BP-201ENST00000261415 KRT31Q15323 416 aa20.33■□□□□ 0.85
COL4A3BP-201ENST00000261415 TAS1R3Q7RTX0 852 aa20.33■□□□□ 0.85
COL4A3BP-201ENST00000261415 CCT8L2Q96SF2 557 aa20.33■□□□□ 0.85
COL4A3BP-201ENST00000261415 AGPAT3Q9NRZ7 376 aa20.33■□□□□ 0.85
COL4A3BP-201ENST00000261415 CLIC2O15247 247 aa20.33■□□□□ 0.84
COL4A3BP-201ENST00000261415 ASGR1P07306 291 aa20.33■□□□□ 0.84
COL4A3BP-201ENST00000261415 TMOD1P28289 359 aa20.33■□□□□ 0.84
COL4A3BP-201ENST00000261415 XRCC4Q13426 336 aa20.33■□□□□ 0.84
COL4A3BP-201ENST00000261415 PTGISQ16647 500 aa20.33■□□□□ 0.84
COL4A3BP-201ENST00000261415 CCSAPQ6IQ19 270 aaPredicted RBP20.33■□□□□ 0.84
COL4A3BP-201ENST00000261415 NFRKBQ6P4R8 1299 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms