RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 FSCN1Q16658 493 aaKnown RBP20.42■□□□□ 0.86
TRIM47-201ENST00000254816 ZNF568Q3ZCX4 644 aa20.42■□□□□ 0.86
TRIM47-201ENST00000254816 MPZL3Q6UWV2 235 aa20.42■□□□□ 0.86
TRIM47-201ENST00000254816 THNSL1Q8IYQ7 743 aa20.42■□□□□ 0.86
TRIM47-201ENST00000254816 PPM1KQ8N3J5 372 aa20.42■□□□□ 0.86
TRIM47-201ENST00000254816 CASP8AP2Q9UKL3 1982 aa20.42■□□□□ 0.86
TRIM47-201ENST00000254816 RRN3P2A6NIE6 340 aa20.41■□□□□ 0.86
TRIM47-201ENST00000254816 OGTO15294 1046 aa20.41■□□□□ 0.86
TRIM47-201ENST00000254816 C6orf222P0C671 652 aaPredicted RBP20.41■□□□□ 0.86
TRIM47-201ENST00000254816 FERP16591 822 aa20.41■□□□□ 0.86
TRIM47-201ENST00000254816 ZNF200P98182 395 aaPredicted RBP20.41■□□□□ 0.86
TRIM47-201ENST00000254816 SP3Q02447 781 aa20.41■□□□□ 0.86
TRIM47-201ENST00000254816 SLC18A3Q16572 532 aa20.41■□□□□ 0.86
TRIM47-201ENST00000254816 AMHR2Q16671 573 aa20.41■□□□□ 0.86
TRIM47-201ENST00000254816 KIZQ2M2Z5 673 aa20.41■□□□□ 0.86
TRIM47-201ENST00000254816 TDRD10Q5VZ19 366 aaKnown RBP20.41■□□□□ 0.86
TRIM47-201ENST00000254816 MFSD14CQ5VZR4 134 aa20.41■□□□□ 0.86
TRIM47-201ENST00000254816 C15orf39Q6ZRI6 1047 aa20.41■□□□□ 0.86
TRIM47-201ENST00000254816 DNAAF5Q86Y56 855 aa20.41■□□□□ 0.86
TRIM47-201ENST00000254816 TATDN2Q93075 761 aa20.41■□□□□ 0.86
TRIM47-201ENST00000254816 CREBZFQ9NS37 354 aa20.41■□□□□ 0.86
TRIM47-201ENST00000254816 PRMT7Q9NVM4 692 aaPredicted RBP20.41■□□□□ 0.86
TRIM47-201ENST00000254816 GINS2Q9Y248 185 aa20.41■□□□□ 0.86
TRIM47-201ENST00000254816 Q9Y3F1 56 aa20.41■□□□□ 0.86
TRIM47-201ENST00000254816 NRCAMQ92823 1304 aa20.41■□□□□ 0.86
TRIM47-201ENST00000254816 MACROD2A1Z1Q3 448 aa20.41■□□□□ 0.86
TRIM47-201ENST00000254816 KRT86O43790 486 aa20.41■□□□□ 0.86
TRIM47-201ENST00000254816 TRPA1O75762 1119 aa20.41■□□□□ 0.86
TRIM47-201ENST00000254816 C4BPAP04003 597 aaKnown RBP20.41■□□□□ 0.86
TRIM47-201ENST00000254816 FGFR4P22455 802 aa20.41■□□□□ 0.86
TRIM47-201ENST00000254816 POU5F1BQ06416 359 aa20.41■□□□□ 0.86
TRIM47-201ENST00000254816 ENPEPQ07075 957 aa20.41■□□□□ 0.86
TRIM47-201ENST00000254816 KIF5AQ12840 1032 aa20.41■□□□□ 0.86
TRIM47-201ENST00000254816 SCARA3Q6AZY7 606 aa20.41■□□□□ 0.86
TRIM47-201ENST00000254816 RUFY4Q6ZNE9 571 aa20.41■□□□□ 0.86
TRIM47-201ENST00000254816 OR5B17Q8NGF7 314 aa20.41■□□□□ 0.86
TRIM47-201ENST00000254816 KREMEN1Q96MU8 473 aa20.41■□□□□ 0.86
TRIM47-201ENST00000254816 RNF186Q9NXI6 227 aa20.41■□□□□ 0.86
TRIM47-201ENST00000254816 HAS3O00219 553 aa20.4■□□□□ 0.86
TRIM47-201ENST00000254816 BIRC3Q13489 604 aa20.4■□□□□ 0.86
TRIM47-201ENST00000254816 BRSK2Q8IWQ3 736 aa20.4■□□□□ 0.86
TRIM47-201ENST00000254816 BZW2Q9Y6E2 419 aaKnown RBP20.4■□□□□ 0.86
TRIM47-201ENST00000254816 FAM170AA1A519 330 aa20.39■□□□□ 0.86
TRIM47-201ENST00000254816 ZEB2O60315 1214 aa20.39■□□□□ 0.86
TRIM47-201ENST00000254816 TFRCP02786 760 aaKnown RBP20.39■□□□□ 0.86
TRIM47-201ENST00000254816 ZSCAN20P17040 1043 aaPredicted RBP20.39■□□□□ 0.86
TRIM47-201ENST00000254816 RFX1P22670 979 aa20.39■□□□□ 0.86
TRIM47-201ENST00000254816 ZACNQ401N2 412 aa20.39■□□□□ 0.86
TRIM47-201ENST00000254816 ZNF662Q6ZS27 426 aa20.39■□□□□ 0.86
TRIM47-201ENST00000254816 IFNLR1Q8IU57 520 aaPredicted RBP20.39■□□□□ 0.86
TRIM47-201ENST00000254816 TMEM192Q8IY95 271 aa20.39■□□□□ 0.86
TRIM47-201ENST00000254816 HELQQ8TDG4 1101 aa20.39■□□□□ 0.86
TRIM47-201ENST00000254816 CGRRF1Q99675 332 aa20.39■□□□□ 0.86
TRIM47-201ENST00000254816 PACSIN1Q9BY11 444 aa20.39■□□□□ 0.86
TRIM47-201ENST00000254816 CDT1Q9H211 546 aa20.39■□□□□ 0.86
TRIM47-201ENST00000254816 CPSF3Q9UKF6 684 aaKnown RBP20.39■□□□□ 0.86
TRIM47-201ENST00000254816 TNFSF13BQ9Y275 285 aa20.39■□□□□ 0.86
TRIM47-201ENST00000254816 DUSP11O75319 330 aaKnown RBP20.39■□□□□ 0.85
TRIM47-201ENST00000254816 VNN1O95497 513 aa20.39■□□□□ 0.85
TRIM47-201ENST00000254816 PGK1P00558 417 aa20.39■□□□□ 0.85
TRIM47-201ENST00000254816 CYP2C9P11712 490 aa20.39■□□□□ 0.85
TRIM47-201ENST00000254816 ELNP15502 786 aa20.39■□□□□ 0.85
TRIM47-201ENST00000254816 USP8P40818 1118 aa20.39■□□□□ 0.85
TRIM47-201ENST00000254816 APLP1P51693 650 aa20.39■□□□□ 0.85
TRIM47-201ENST00000254816 PURAQ00577 322 aaKnown RBP20.39■□□□□ 0.85
TRIM47-201ENST00000254816 NT5C1BQ96P26 610 aa20.39■□□□□ 0.85
TRIM47-201ENST00000254816 CDHR5Q9HBB8 845 aa20.39■□□□□ 0.85
TRIM47-201ENST00000254816 GPR25O00155 361 aa20.38■□□□□ 0.85
TRIM47-201ENST00000254816 TREHO43280 583 aa20.38■□□□□ 0.85
TRIM47-201ENST00000254816 HLA-DRAP01903 254 aa20.38■□□□□ 0.85
TRIM47-201ENST00000254816 ARF4P18085 180 aaPredicted RBP20.38■□□□□ 0.85
TRIM47-201ENST00000254816 HTRA3P83110 453 aa20.38■□□□□ 0.85
TRIM47-201ENST00000254816 CACNB2Q08289 660 aaPredicted RBP20.38■□□□□ 0.85
TRIM47-201ENST00000254816 FAM187BQ17R55 369 aa20.38■□□□□ 0.85
TRIM47-201ENST00000254816 RSRC2Q7L4I2 434 aaKnown RBP20.38■□□□□ 0.85
TRIM47-201ENST00000254816 PUF60Q9UHX1 559 aaKnown RBP20.38■□□□□ 0.85
TRIM47-201ENST00000254816 HTTP42858 3142 aa20.38■□□□□ 0.85
TRIM47-201ENST00000254816 PIK3CAP42336 1068 aa20.38■□□□□ 0.85
TRIM47-201ENST00000254816 SPOPLQ6IQ16 392 aa20.38■□□□□ 0.85
TRIM47-201ENST00000254816 OLIG1Q8TAK6 271 aa20.38■□□□□ 0.85
TRIM47-201ENST00000254816 ZMYND15Q9H091 742 aa20.38■□□□□ 0.85
TRIM47-201ENST00000254816 PDZD7Q9H5P4 517 aa20.38■□□□□ 0.85
TRIM47-201ENST00000254816 HDAC6Q9UBN7 1215 aa20.38■□□□□ 0.85
TRIM47-201ENST00000254816 DAAM1Q9Y4D1 1078 aa20.38■□□□□ 0.85
TRIM47-201ENST00000254816 CTAGE9A4FU28 777 aa20.37■□□□□ 0.85
TRIM47-201ENST00000254816 SEC31AO94979 1220 aaKnown RBP20.37■□□□□ 0.85
TRIM47-201ENST00000254816 KIF22Q14807 665 aa20.37■□□□□ 0.85
TRIM47-201ENST00000254816 GNASQ5JWF2 1037 aa20.37■□□□□ 0.85
TRIM47-201ENST00000254816 KRT222Q8N1A0 295 aa20.37■□□□□ 0.85
TRIM47-201ENST00000254816 LNX1Q8TBB1 728 aaPredicted RBP20.37■□□□□ 0.85
TRIM47-201ENST00000254816 CD99L2Q8TCZ2 262 aa20.37■□□□□ 0.85
TRIM47-201ENST00000254816 DNAJB3Q8WWF6 145 aa20.37■□□□□ 0.85
TRIM47-201ENST00000254816 DHX38Q92620 1227 aaKnown RBP20.37■□□□□ 0.85
TRIM47-201ENST00000254816 SALL4Q9UJQ4 1053 aa20.37■□□□□ 0.85
TRIM47-201ENST00000254816 MBLAC1A4D2B0 266 aaPredicted RBP20.37■□□□□ 0.85
TRIM47-201ENST00000254816 DDX3XO00571 662 aaKnown RBP eCLIP20.37■□□□□ 0.851e-6■■■□□ 17.7
TRIM47-201ENST00000254816 TSPAN1O60635 241 aa20.37■□□□□ 0.85
TRIM47-201ENST00000254816 CCND3P30281 292 aaPredicted RBP20.37■□□□□ 0.85
TRIM47-201ENST00000254816 ADAM17P78536 824 aa20.37■□□□□ 0.85
TRIM47-201ENST00000254816 TSGA10Q9BZW7 698 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms