RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 MTERF3Q96E29 417 aa13.87□□□□□ -0.19
PCDHGA3-201ENST00000253812 TMA16Q96EY4 203 aaKnown RBP13.87□□□□□ -0.19
PCDHGA3-201ENST00000253812 EPS8L2Q9H6S3 715 aa13.87□□□□□ -0.19
PCDHGA3-201ENST00000253812 FAM153AQ9UHL3 310 aa13.87□□□□□ -0.19
PCDHGA3-201ENST00000253812 SOX13Q9UN79 622 aa13.87□□□□□ -0.19
PCDHGA3-201ENST00000253812 TRIM49BA6NDI0 452 aa13.87□□□□□ -0.19
PCDHGA3-201ENST00000253812 FSBPO95073 299 aa13.87□□□□□ -0.19
PCDHGA3-201ENST00000253812 LIFRP42702 1097 aa13.87□□□□□ -0.19
PCDHGA3-201ENST00000253812 IZUMO2Q6UXV1 221 aa13.87□□□□□ -0.19
PCDHGA3-201ENST00000253812 DPF2Q92785 391 aa13.87□□□□□ -0.19
PCDHGA3-201ENST00000253812 ARHGEF1Q92888 912 aaKnown RBP13.87□□□□□ -0.19
PCDHGA3-201ENST00000253812 CEP95Q96GE4 821 aa13.87□□□□□ -0.19
PCDHGA3-201ENST00000253812 ITIH6Q6UXX5 1313 aa13.87□□□□□ -0.19
PCDHGA3-201ENST00000253812 ADGRA3Q8IWK6 1321 aa13.87□□□□□ -0.19
PCDHGA3-201ENST00000253812 TAF4O00268 1085 aa13.87□□□□□ -0.19
PCDHGA3-201ENST00000253812 PLOD1Q02809 727 aaPredicted RBP13.87□□□□□ -0.19
PCDHGA3-201ENST00000253812 TSTA3Q13630 321 aaPredicted RBP13.87□□□□□ -0.19
PCDHGA3-201ENST00000253812 TRADDQ15628 312 aa13.87□□□□□ -0.19
PCDHGA3-201ENST00000253812 OASLQ15646 514 aaKnown RBP13.87□□□□□ -0.19
PCDHGA3-201ENST00000253812 NDUFA5Q16718 116 aa13.87□□□□□ -0.19
PCDHGA3-201ENST00000253812 LPCAT2Q7L5N7 544 aa13.87□□□□□ -0.19
PCDHGA3-201ENST00000253812 COL23A1Q86Y22 540 aaPredicted RBP13.87□□□□□ -0.19
PCDHGA3-201ENST00000253812 LRRC47Q8N1G4 583 aaKnown RBP13.87□□□□□ -0.19
PCDHGA3-201ENST00000253812 ZNF564Q8TBZ8 553 aaPredicted RBP13.87□□□□□ -0.19
PCDHGA3-201ENST00000253812 EXT2Q93063 718 aa13.87□□□□□ -0.19
PCDHGA3-201ENST00000253812 ZKSCAN4Q969J2 545 aaPredicted RBP13.87□□□□□ -0.19
PCDHGA3-201ENST00000253812 ADPGKQ9BRR6 497 aa13.87□□□□□ -0.19
PCDHGA3-201ENST00000253812 NEUROG2Q9H2A3 272 aa13.87□□□□□ -0.19
PCDHGA3-201ENST00000253812 H3BQF6 201 aa13.86□□□□□ -0.19
PCDHGA3-201ENST00000253812 KRT16P08779 473 aa13.86□□□□□ -0.19
PCDHGA3-201ENST00000253812 RGS2P41220 211 aa13.86□□□□□ -0.19
PCDHGA3-201ENST00000253812 RPS6P62753 249 aaKnown RBP13.86□□□□□ -0.19
PCDHGA3-201ENST00000253812 FOXD4Q12950 439 aaPredicted RBP13.86□□□□□ -0.19
PCDHGA3-201ENST00000253812 ZCCHC7Q8N3Z6 543 aaKnown RBP13.86□□□□□ -0.19
PCDHGA3-201ENST00000253812 C20orf96Q9NUD7 363 aaPredicted RBP13.86□□□□□ -0.19
PCDHGA3-201ENST00000253812 C1orf167Q5SNV9 1468 aa13.86□□□□□ -0.19
PCDHGA3-201ENST00000253812 AIM2O14862 343 aa13.86□□□□□ -0.19
PCDHGA3-201ENST00000253812 ZSCAN9O15535 394 aaPredicted RBP13.86□□□□□ -0.19
PCDHGA3-201ENST00000253812 RASGRF1Q13972 1273 aa13.86□□□□□ -0.19
PCDHGA3-201ENST00000253812 WASHC2DQ5SRD0 308 aa13.86□□□□□ -0.19
PCDHGA3-201ENST00000253812 P3H2Q8IVL5 708 aa13.86□□□□□ -0.19
PCDHGA3-201ENST00000253812 ZFRQ96KR1 1074 aaKnown RBP13.86□□□□□ -0.19
PCDHGA3-201ENST00000253812 PNKPQ96T60 521 aa13.86□□□□□ -0.19
PCDHGA3-201ENST00000253812 HERC5Q9UII4 1024 aaKnown RBP13.86□□□□□ -0.19
PCDHGA3-201ENST00000253812 C2CD2Q9Y426 696 aa13.86□□□□□ -0.19
PCDHGA3-201ENST00000253812 GMEB1Q9Y692 573 aa13.86□□□□□ -0.19
PCDHGA3-201ENST00000253812 UBE4BO95155 1302 aa13.86□□□□□ -0.19
PCDHGA3-201ENST00000253812 SSU72P8A0A1W2PR75 194 aa13.86□□□□□ -0.19
PCDHGA3-201ENST00000253812 SAC3D1A6NKF1 404 aa13.86□□□□□ -0.19
PCDHGA3-201ENST00000253812 NLRP11P59045 1033 aaKnown RBP13.86□□□□□ -0.19
PCDHGA3-201ENST00000253812 AASDHQ4L235 1098 aaPredicted RBP13.86□□□□□ -0.19
PCDHGA3-201ENST00000253812 CLEC4GQ6UXB4 293 aa13.86□□□□□ -0.19
PCDHGA3-201ENST00000253812 HACE1Q8IYU2 909 aa13.86□□□□□ -0.19
PCDHGA3-201ENST00000253812 C4orf33Q8N1A6 199 aa13.86□□□□□ -0.19
PCDHGA3-201ENST00000253812 STKLD1Q8NE28 680 aa13.86□□□□□ -0.19
PCDHGA3-201ENST00000253812 RNF217Q8TC41 542 aa13.86□□□□□ -0.19
PCDHGA3-201ENST00000253812 CHURC1Q8WUH1 139 aa13.86□□□□□ -0.19
PCDHGA3-201ENST00000253812 PVALEFA0A1B0GWK0 134 aa13.86□□□□□ -0.19
PCDHGA3-201ENST00000253812 PRPF3O43395 683 aaKnown RBP13.86□□□□□ -0.19
PCDHGA3-201ENST00000253812 GYS1P13807 737 aa13.86□□□□□ -0.19
PCDHGA3-201ENST00000253812 PSMA2P25787 234 aa13.86□□□□□ -0.19
PCDHGA3-201ENST00000253812 COPAP53621 1224 aa13.86□□□□□ -0.19
PCDHGA3-201ENST00000253812 CACNB1Q02641 598 aaPredicted RBP13.86□□□□□ -0.19
PCDHGA3-201ENST00000253812 MECOMQ03112 1051 aa13.86□□□□□ -0.19
PCDHGA3-201ENST00000253812 ICA1Q05084 483 aa13.86□□□□□ -0.19
PCDHGA3-201ENST00000253812 ARMCX4Q5H9R4 360 aa13.86□□□□□ -0.19
PCDHGA3-201ENST00000253812 SIX5Q8N196 739 aa13.86□□□□□ -0.19
PCDHGA3-201ENST00000253812 LCORLQ8N3X6 602 aa13.86□□□□□ -0.19
PCDHGA3-201ENST00000253812 TC2NQ8N9U0 490 aa13.86□□□□□ -0.19
PCDHGA3-201ENST00000253812 RASGRP4Q8TDF6 673 aa13.86□□□□□ -0.19
PCDHGA3-201ENST00000253812 QKIQ96PU8 341 aaKnown RBP eCLIP13.86□□□□□ -0.19
PCDHGA3-201ENST00000253812 CHP1Q99653 195 aa13.86□□□□□ -0.19
PCDHGA3-201ENST00000253812 HAO1Q9UJM8 370 aa13.86□□□□□ -0.19
PCDHGA3-201ENST00000253812 F8VZ95 297 aa13.85□□□□□ -0.19
PCDHGA3-201ENST00000253812 SH2B2O14492 632 aaPredicted RBP13.85□□□□□ -0.19
PCDHGA3-201ENST00000253812 PPEF1O14829 653 aaPredicted RBP13.85□□□□□ -0.19
PCDHGA3-201ENST00000253812 PLA2G4BP0C869 781 aa13.85□□□□□ -0.19
PCDHGA3-201ENST00000253812 C21orf59P57076 290 aa13.85□□□□□ -0.19
PCDHGA3-201ENST00000253812 PRPF39Q86UA1 669 aaKnown RBP13.85□□□□□ -0.19
PCDHGA3-201ENST00000253812 ERICH1Q86X53 443 aa13.85□□□□□ -0.19
PCDHGA3-201ENST00000253812 TTC8Q8TAM2 541 aa13.85□□□□□ -0.19
PCDHGA3-201ENST00000253812 RBM15Q96T37 977 aaKnown RBP eCLIP13.85□□□□□ -0.19
PCDHGA3-201ENST00000253812 APOL6Q9BWW8 343 aa13.85□□□□□ -0.19
PCDHGA3-201ENST00000253812 TRPC7Q9HCX4 862 aa13.85□□□□□ -0.19
PCDHGA3-201ENST00000253812 FRMPD2Q68DX3 1309 aaPredicted RBP13.85□□□□□ -0.19
PCDHGA3-201ENST00000253812 BBOX1O75936 387 aa13.85□□□□□ -0.19
PCDHGA3-201ENST00000253812 LCA5LO95447 670 aa13.85□□□□□ -0.19
PCDHGA3-201ENST00000253812 OTUD4Q01804 1114 aaKnown RBP13.85□□□□□ -0.19
PCDHGA3-201ENST00000253812 RHOT1Q8IXI2 618 aa13.85□□□□□ -0.19
PCDHGA3-201ENST00000253812 MDM1Q8TC05 714 aa13.85□□□□□ -0.19
PCDHGA3-201ENST00000253812 TBCKQ8TEA7 893 aa13.85□□□□□ -0.19
PCDHGA3-201ENST00000253812 NACC1Q96RE7 527 aa13.85□□□□□ -0.19
PCDHGA3-201ENST00000253812 KLHL4Q9C0H6 718 aa13.85□□□□□ -0.19
PCDHGA3-201ENST00000253812 NEXMIFQ5QGS0 1516 aa13.85□□□□□ -0.19
PCDHGA3-201ENST00000253812 TCP10L2B9ZVM9 353 aa13.85□□□□□ -0.19
PCDHGA3-201ENST00000253812 RAD51CO43502 376 aa13.85□□□□□ -0.19
PCDHGA3-201ENST00000253812 ORC4O43929 436 aa13.85□□□□□ -0.19
PCDHGA3-201ENST00000253812 GSNP06396 782 aa13.85□□□□□ -0.19
PCDHGA3-201ENST00000253812 MYBL1P10243 752 aa13.85□□□□□ -0.19
PCDHGA3-201ENST00000253812 IL12RB1P42701 662 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms